BQ623076
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of BQ623076 vs. ExPASy Swiss-Prot
Match: RL27_VIBCH (50S ribosomal protein L27 OS=Vibrio cholerae GN=rpmA PE=3 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 1.021e-24 Identity = 54/85 (63.53%), Postives = 66/85 (77.65%), Query Frame = 2 Query: 74 ATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGMGKDHTLYALKEGRVKFEKHKLSGRKWVHVEPKE 328 A KK GST+NGRDS+ K LGVK+FGGE V+ GNIIVRQRGT+FH G VG+GKDHTL+AL +G+VKFE + RK+V +E E Sbjct: 2 AHKKAGGSTRNGRDSESKRLGVKRFGGESVLAGNIIVRQRGTKFHAGTNVGIGKDHTLFALSDGKVKFEVKGPNNRKFVSIETAE 86
BLAST of BQ623076 vs. ExPASy Swiss-Prot
Match: RL27_VIBC3 (50S ribosomal protein L27 OS=Vibrio cholerae serotype O1 (strain ATCC 39541 / Ogawa 395 / O395) GN=rpmA PE=3 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 1.021e-24 Identity = 54/85 (63.53%), Postives = 66/85 (77.65%), Query Frame = 2 Query: 74 ATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGMGKDHTLYALKEGRVKFEKHKLSGRKWVHVEPKE 328 A KK GST+NGRDS+ K LGVK+FGGE V+ GNIIVRQRGT+FH G VG+GKDHTL+AL +G+VKFE + RK+V +E E Sbjct: 2 AHKKAGGSTRNGRDSESKRLGVKRFGGESVLAGNIIVRQRGTKFHAGTNVGIGKDHTLFALSDGKVKFEVKGPNNRKFVSIETAE 86
BLAST of BQ623076 vs. ExPASy Swiss-Prot
Match: RL27_VIBFM (50S ribosomal protein L27 OS=Vibrio fischeri (strain MJ11) GN=rpmA PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 1.333e-24 Identity = 54/82 (65.85%), Postives = 64/82 (78.05%), Query Frame = 2 Query: 74 ATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGMGKDHTLYALKEGRVKFEKHKLSGRKWVHVE 319 A KK GST+NGRDS+ K LGVK+FGGE V+ GNIIVRQRGT+FH G VG+GKDHTL+AL EG+VKFE RK+V +E Sbjct: 2 AHKKAGGSTRNGRDSESKRLGVKRFGGESVLAGNIIVRQRGTKFHAGTNVGIGKDHTLFALSEGKVKFEVKGPKNRKFVSIE 83
BLAST of BQ623076 vs. ExPASy Swiss-Prot
Match: RL27_VIBF1 (50S ribosomal protein L27 OS=Vibrio fischeri (strain ATCC 700601 / ES114) GN=rpmA PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 1.333e-24 Identity = 54/82 (65.85%), Postives = 64/82 (78.05%), Query Frame = 2 Query: 74 ATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGMGKDHTLYALKEGRVKFEKHKLSGRKWVHVE 319 A KK GST+NGRDS+ K LGVK+FGGE V+ GNIIVRQRGT+FH G VG+GKDHTL+AL EG+VKFE RK+V +E Sbjct: 2 AHKKAGGSTRNGRDSESKRLGVKRFGGESVLAGNIIVRQRGTKFHAGTNVGIGKDHTLFALSEGKVKFEVKGPKNRKFVSIE 83
BLAST of BQ623076 vs. ExPASy Swiss-Prot
Match: RL27_ALTMD (50S ribosomal protein L27 OS=Alteromonas macleodii (strain DSM 17117 / Deep ecotype) GN=rpmA PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 1.333e-24 Identity = 53/81 (65.43%), Postives = 65/81 (80.25%), Query Frame = 2 Query: 74 ATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGMGKDHTLYALKEGRVKFEKHKLSGRKWVHV 316 A KK GSTKNGRDS+ K LGVK+FGGE V+ GNIIVRQRGTRFH GD +G+GKDHTL+ALK+G+V+F+ RK+V + Sbjct: 2 AHKKAGGSTKNGRDSESKRLGVKRFGGESVLAGNIIVRQRGTRFHAGDNMGIGKDHTLFALKDGKVQFDVKGPKNRKFVSI 82
BLAST of BQ623076 vs. ExPASy Swiss-Prot
Match: RL27_VIBVY (50S ribosomal protein L27 OS=Vibrio vulnificus (strain YJ016) GN=rpmA PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 2.274e-24 Identity = 53/82 (64.63%), Postives = 65/82 (79.27%), Query Frame = 2 Query: 74 ATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGMGKDHTLYALKEGRVKFEKHKLSGRKWVHVE 319 A KK GST+NGRDS+ K LGVK+FGGE V+ GNIIVRQRGT+FH G+ VG+GKDHTL+AL +G+VKFE RK+V +E Sbjct: 2 AHKKAGGSTRNGRDSESKRLGVKRFGGESVLAGNIIVRQRGTQFHAGNNVGLGKDHTLFALTDGKVKFEVKGPKNRKFVSIE 83
BLAST of BQ623076 vs. ExPASy Swiss-Prot
Match: RL27_VIBVU (50S ribosomal protein L27 OS=Vibrio vulnificus GN=rpmA PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 2.274e-24 Identity = 53/82 (64.63%), Postives = 65/82 (79.27%), Query Frame = 2 Query: 74 ATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGMGKDHTLYALKEGRVKFEKHKLSGRKWVHVE 319 A KK GST+NGRDS+ K LGVK+FGGE V+ GNIIVRQRGT+FH G+ VG+GKDHTL+AL +G+VKFE RK+V +E Sbjct: 2 AHKKAGGSTRNGRDSESKRLGVKRFGGESVLAGNIIVRQRGTQFHAGNNVGLGKDHTLFALTDGKVKFEVKGPKNRKFVSIE 83
BLAST of BQ623076 vs. ExPASy Swiss-Prot
Match: RL27_SERP5 (50S ribosomal protein L27 OS=Serratia proteamaculans (strain 568) GN=rpmA PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 2.274e-24 Identity = 53/82 (64.63%), Postives = 65/82 (79.27%), Query Frame = 2 Query: 74 ATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGMGKDHTLYALKEGRVKFEKHKLSGRKWVHVE 319 A KK GST+NGRDS+ K LGVK+FGGE V+ G+IIVRQRGT+FH G VG GKDHTL+ALK+G+VKFE S RK++ +E Sbjct: 2 AHKKAGGSTRNGRDSEAKRLGVKRFGGEAVLAGSIIVRQRGTKFHAGTNVGCGKDHTLFALKDGKVKFEVKGPSNRKFISIE 83
BLAST of BQ623076 vs. ExPASy Swiss-Prot
Match: RL27_BARHE (50S ribosomal protein L27 OS=Bartonella henselae GN=rpmA PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 2.274e-24 Identity = 55/83 (66.27%), Postives = 66/83 (79.52%), Query Frame = 2 Query: 74 ATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGMGKDHTLYALKEGRVKFEKHKLSGRKWVHVEP 322 A KK GS++NGRDS+ K LGVKKFGGE VI GNIIVRQRGTR+HPGD VG+GKDHTL+AL +G V F++ K + R +V V P Sbjct: 2 AHKKAGGSSRNGRDSESKRLGVKKFGGEAVIAGNIIVRQRGTRWHPGDNVGIGKDHTLFALSKGMVSFQR-KANNRSYVSVIP 83
BLAST of BQ623076 vs. ExPASy Swiss-Prot
Match: RL27_ALISL (50S ribosomal protein L27 OS=Aliivibrio salmonicida (strain LFI1238) GN=rpmA PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 2.970e-24 Identity = 53/82 (64.63%), Postives = 64/82 (78.05%), Query Frame = 2 Query: 74 ATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGMGKDHTLYALKEGRVKFEKHKLSGRKWVHVE 319 A KK GST+NGRDS+ K LGVK+FGGE V+ GNIIVRQRGT+FH G VG+GKDHTL+AL EG+VKFE RK+V ++ Sbjct: 2 AHKKAGGSTRNGRDSESKRLGVKRFGGESVLAGNIIVRQRGTKFHAGTNVGIGKDHTLFALSEGKVKFEVKGPKNRKFVSID 83 The following BLAST results are available for this feature:
BLAST of BQ623076 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >BQ623076 ID=BQ623076; Name=BQ623076; organism=Citrus sinensis; type=EST; length=540bpback to top |