BQ623076
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of BQ623076 vs. ExPASy Swiss-Prot
Match: RL27_OCHA4 (50S ribosomal protein L27 OS=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) GN=rpmA PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 1.248e-22 Identity = 51/83 (61.45%), Postives = 64/83 (77.11%), Query Frame = 2 Query: 74 ATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGMGKDHTLYALKEGRVKFEKHKLSGRKWVHVEP 322 A KK GS++NGRDS+ K LGVKKFGGE V+ GNIIVRQRGT++HPG VG+GKDHT++A G V F + K +GR +V V+P Sbjct: 2 AHKKAGGSSRNGRDSESKRLGVKKFGGEAVLAGNIIVRQRGTKWHPGANVGLGKDHTIFATTNGSVSF-RTKANGRTYVSVDP 83
BLAST of BQ623076 vs. ExPASy Swiss-Prot
Match: RL27_SPHWW (50S ribosomal protein L27 OS=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) GN=rpmA PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 1.629e-22 Identity = 53/82 (64.63%), Postives = 64/82 (78.05%), Query Frame = 2 Query: 74 ATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGMGKDHTLYALKEGRVKFEKHKLSGRKWVHVE 319 A KK GS++NGRDS + LGVKKFGGE VI GNII+RQRGT+ +PG VG+GKDHTL+AL +GRV F KL GRK+V V+ Sbjct: 2 AHKKAGGSSRNGRDSAGRRLGVKKFGGELVIGGNIIIRQRGTKVYPGRNVGIGKDHTLFALTDGRVAFHSGKL-GRKYVSVD 82
BLAST of BQ623076 vs. ExPASy Swiss-Prot
Match: RL27_RHOPT (50S ribosomal protein L27 OS=Rhodopseudomonas palustris (strain TIE-1) GN=rpmA PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 1.629e-22 Identity = 54/83 (65.06%), Postives = 63/83 (75.90%), Query Frame = 2 Query: 74 ATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGMGKDHTLYALKEGRVKFEKHKLSGRKWVHVEP 322 A KK GS++NGRDS K LGVK FGGE VIPGNII RQRGT++HPG VGMG DHTL+A EGRV+F + K +GR +V V P Sbjct: 2 AHKKAGGSSRNGRDSAGKRLGVKAFGGEHVIPGNIIARQRGTQWHPGLNVGMGTDHTLFAKVEGRVEF-RAKANGRTYVSVLP 83
BLAST of BQ623076 vs. ExPASy Swiss-Prot
Match: RL27_RHOPA (50S ribosomal protein L27 OS=Rhodopseudomonas palustris GN=rpmA PE=1 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 1.629e-22 Identity = 54/83 (65.06%), Postives = 63/83 (75.90%), Query Frame = 2 Query: 74 ATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGMGKDHTLYALKEGRVKFEKHKLSGRKWVHVEP 322 A KK GS++NGRDS K LGVK FGGE VIPGNII RQRGT++HPG VGMG DHTL+A EGRV+F + K +GR +V V P Sbjct: 2 AHKKAGGSSRNGRDSAGKRLGVKAFGGEHVIPGNIIARQRGTQWHPGLNVGMGTDHTLFAKVEGRVEF-RAKANGRTYVSVLP 83
BLAST of BQ623076 vs. ExPASy Swiss-Prot
Match: RL27_PSYCK (50S ribosomal protein L27 OS=Psychrobacter cryohalolentis (strain K5) GN=rpmA PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 1.629e-22 Identity = 51/82 (62.20%), Postives = 62/82 (75.61%), Query Frame = 2 Query: 74 ATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGMGKDHTLYALKEGRVKFEKHKLSGRKWVHVE 319 A KK AGS++NGRDS PK LGVK FGG+ ++ GNIIVRQRGT FH G+ VGMG+DHTL+AL +G VKF R++V VE Sbjct: 2 AHKKAAGSSRNGRDSNPKMLGVKIFGGQAIVAGNIIVRQRGTEFHAGEGVGMGRDHTLFALNDGVVKFATKGKFNRRYVMVE 83
BLAST of BQ623076 vs. ExPASy Swiss-Prot
Match: RL27_PSYA2 (50S ribosomal protein L27 OS=Psychrobacter arcticus (strain DSM 17307 / 273-4) GN=rpmA PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 1.629e-22 Identity = 51/82 (62.20%), Postives = 62/82 (75.61%), Query Frame = 2 Query: 74 ATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGMGKDHTLYALKEGRVKFEKHKLSGRKWVHVE 319 A KK AGS++NGRDS PK LGVK FGG+ ++ GNIIVRQRGT FH G+ VGMG+DHTL+AL +G VKF R++V VE Sbjct: 2 AHKKAAGSSRNGRDSNPKMLGVKIFGGQAIVAGNIIVRQRGTEFHAGEGVGMGRDHTLFALNDGVVKFATKGKFNRRYVMVE 83
BLAST of BQ623076 vs. ExPASy Swiss-Prot
Match: RL27_PSEFS (50S ribosomal protein L27 OS=Pseudomonas fluorescens (strain SBW25) GN=rpmA PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 1.629e-22 Identity = 51/81 (62.96%), Postives = 62/81 (76.54%), Query Frame = 2 Query: 74 ATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGMGKDHTLYALKEGRVKFEKHKLSGRKWVHV 316 A KK GST+NGRDS+ K LGVK +GG+++IPGNIIVRQRGT+FH G VGMGKDHTL+A EG +KFE R++V V Sbjct: 2 AHKKAGGSTRNGRDSEAKRLGVKMYGGQKIIPGNIIVRQRGTQFHAGYGVGMGKDHTLFAKIEGVIKFEVKGAFNRRYVSV 82
BLAST of BQ623076 vs. ExPASy Swiss-Prot
Match: RL27_MARMS (50S ribosomal protein L27 OS=Marinomonas sp. (strain MWYL1) GN=rpmA PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 1.629e-22 Identity = 53/77 (68.83%), Postives = 63/77 (81.82%), Query Frame = 2 Query: 74 ATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGMGKDHTLYALKEGRVKFE-KHKLSGR 301 A KK GST+NGRDS+ K LGVK+FGG+ VIPGNI+VRQRGT+FHPG V +GKDHTL+A+ EG+VKFE K KL R Sbjct: 2 AHKKAGGSTRNGRDSESKRLGVKRFGGQVVIPGNILVRQRGTQFHPGVGVQIGKDHTLFAVVEGQVKFEVKGKLKRR 78
BLAST of BQ623076 vs. ExPASy Swiss-Prot
Match: RL27_MAGSM (50S ribosomal protein L27 OS=Magnetococcus sp. (strain MC-1) GN=rpmA PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 1.629e-22 Identity = 52/82 (63.41%), Postives = 65/82 (79.27%), Query Frame = 2 Query: 74 ATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGMGKDHTLYALKEGRVKFEKHKLSGRKWVHVE 319 A KK GS++NGRDS+ + LGVKK+GGE VIPGNI+VRQRGT+ PG VGMGKDHTL+AL+EGRV F + R++V+VE Sbjct: 2 AHKKAGGSSRNGRDSEGRRLGVKKYGGENVIPGNILVRQRGTKMWPGVGVGMGKDHTLFALEEGRVAFTMRR--NRQYVNVE 81
BLAST of BQ623076 vs. ExPASy Swiss-Prot
Match: RL27_AZOVD (50S ribosomal protein L27 OS=Azotobacter vinelandii (strain DJ / ATCC BAA-1303) GN=rpmA PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 1.629e-22 Identity = 53/83 (63.86%), Postives = 62/83 (74.70%), Query Frame = 2 Query: 74 ATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGMGKDHTLYALKEGRVKFEKHKLSGRKWVHVEP 322 A KK GST+NGRDS+ K LGVK FGG+ + GNIIVRQRGT+FHPG VG+GKDHTL+A EG VKFE GR++V V P Sbjct: 2 AHKKAGGSTRNGRDSESKRLGVKIFGGQAIRAGNIIVRQRGTQFHPGFGVGIGKDHTLFAKVEGVVKFEVKGAFGRRYVSVVP 84 The following BLAST results are available for this feature:
BLAST of BQ623076 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >BQ623076 ID=BQ623076; Name=BQ623076; organism=Citrus sinensis; type=EST; length=540bpback to top |