BQ623076
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of BQ623076 vs. ExPASy Swiss-Prot
Match: RL27_METFK (50S ribosomal protein L27 OS=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) GN=rpmA PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 4.906e-19 Identity = 46/83 (55.42%), Postives = 58/83 (69.88%), Query Frame = 2 Query: 74 ATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGMGKDHTLYALKEGRVKFEKHKLSGRKWVHVEP 322 A KK GS++NGRDS + LGVK FG + V G+IIVRQRGT+ HPG+ VG+GKDHTL+A +G+V F GRK V + P Sbjct: 2 AHKKAGGSSRNGRDSNAQRLGVKAFGDQFVSAGSIIVRQRGTKMHPGENVGIGKDHTLFAKVDGKVAFSVKGALGRKLVSIIP 84
BLAST of BQ623076 vs. ExPASy Swiss-Prot
Match: RL27_GLOVI (50S ribosomal protein L27 OS=Gloeobacter violaceus GN=rpmA PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 4.906e-19 Identity = 51/94 (54.26%), Postives = 62/94 (65.96%), Query Frame = 2 Query: 74 ATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGMGKDHTLYALKEGRVKFEKHKLSGRKWVHVEPKEGHVLHPLYA 355 A KK GST+NGRDS + LGVK++GGERV GNI++RQRGT+ HPG VG G D TL+AL EG V FE+ RK V V P + P+ A Sbjct: 2 AHKKGTGSTRNGRDSNAQRLGVKRYGGERVKAGNILIRQRGTKIHPGANVGRGSDDTLFALIEGIVTFERLG-RDRKKVSVYPLAQTAMQPVAA 94
BLAST of BQ623076 vs. ExPASy Swiss-Prot
Match: RL27_GEOUR (50S ribosomal protein L27 OS=Geobacter uraniireducens (strain Rf4) GN=rpmA PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 4.906e-19 Identity = 50/83 (60.24%), Postives = 59/83 (71.08%), Query Frame = 2 Query: 74 ATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGMGKDHTLYALKEGRVKFEKHKLSGRKWVHVEP 322 A KK GST+NGRDS + LG KKFGGE V GNII RQ GT+ HPG+ VG+G+D+TL+AL EG VKFE+ RK V V P Sbjct: 2 AHKKGVGSTRNGRDSDGQRLGCKKFGGEHVKAGNIIYRQHGTKIHPGNNVGLGRDYTLFALIEGVVKFERMG-RDRKKVSVYP 83
BLAST of BQ623076 vs. ExPASy Swiss-Prot
Match: RL27_DICTD (50S ribosomal protein L27 OS=Dictyoglomus turgidum (strain Z-1310 / DSM 6724) GN=rpmA PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 4.906e-19 Identity = 49/82 (59.76%), Postives = 63/82 (76.83%), Query Frame = 2 Query: 74 ATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGMGKDHTLYALKEGRVKFE-KHKLSGRKWVHV 316 A KK+ G+++NGRDS PK LGVK+F G+ V GNI+VRQRGT+ +PG VGMG+D TLYAL+ G VKF KH G+K+V+V Sbjct: 2 AHKKSGGASRNGRDSNPKYLGVKRFEGQLVEAGNILVRQRGTKIYPGMNVGMGRDFTLYALQPGIVKFSIKH---GKKYVNV 80
BLAST of BQ623076 vs. ExPASy Swiss-Prot
Match: RL27_COREF (50S ribosomal protein L27 OS=Corynebacterium efficiens GN=rpmA PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 4.906e-19 Identity = 47/85 (55.29%), Postives = 61/85 (71.76%), Query Frame = 2 Query: 74 ATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGMGKDHTLYALKEGRVKFEKHKLSGRKWVHVEPKE 328 ATKK A S+ NGRDS+ K LGVK+FGG++V G I+VRQRGT+FHPG+ VG G D TL+ALK G V+F + R+ V++ E Sbjct: 2 ATKKGASSSSNGRDSEAKRLGVKRFGGQQVNAGEILVRQRGTKFHPGENVGRGGDDTLFALKTGAVQFSTKR--NRRMVNIVENE 84
BLAST of BQ623076 vs. ExPASy Swiss-Prot
Match: RL27_BAUCH (50S ribosomal protein L27 OS=Baumannia cicadellinicola subsp. Homalodisca coagulata GN=rpmA PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 4.906e-19 Identity = 46/81 (56.79%), Postives = 59/81 (72.84%), Query Frame = 2 Query: 74 ATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGMGKDHTLYALKEGRVKFEKHKLSGRKWVHV 316 A KK GST+NGRDS+ K LGVK FG + G+II+RQRGT+FHPG VG GKDHTL+AL +G+V F+ K RK++ + Sbjct: 2 AHKKAGGSTRNGRDSESKRLGVKIFGHQIAKAGSIIIRQRGTKFHPGTNVGCGKDHTLFALTKGKVHFQTKK-GNRKFISI 81
BLAST of BQ623076 vs. ExPASy Swiss-Prot
Match: RK27_ODOSI (50S ribosomal protein L27, chloroplastic OS=Odontella sinensis GN=rpl27 PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 4.906e-19 Identity = 49/81 (60.49%), Postives = 61/81 (75.31%), Query Frame = 2 Query: 74 ATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGMGKDHTLYALKEGRVKFEKHKLSGRKWVHV 316 A KK AGSTKNGRDS K LGVK+FGG+RV GNI+VRQRG +F PG VG GKD TLYAL +G V F+ +K + +K +++ Sbjct: 2 AHKKGAGSTKNGRDSNAKRLGVKRFGGQRVKAGNILVRQRGMKFTPGLNVGCGKDFTLYALTDGIVNFD-YKNAQQKRINI 81
BLAST of BQ623076 vs. ExPASy Swiss-Prot
Match: RL27_VESOH (50S ribosomal protein L27 OS=Vesicomyosocius okutanii subsp. Calyptogena okutanii (strain HA) GN=rpmA PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 6.408e-19 Identity = 46/82 (56.10%), Postives = 57/82 (69.51%), Query Frame = 2 Query: 74 ATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGMGKDHTLYALKEGRVKFEKHKLSGRKWVHVE 319 A KK GST NGRDS K LGVK+FGG+ V+ GNI+VRQRGT+FHPG V GKD TL+A +GRV F K +++ +E Sbjct: 2 AHKKAGGSTNNGRDSVSKRLGVKRFGGQVVLAGNILVRQRGTKFHPGTNVRKGKDDTLFATMDGRVVFSKKGKFMYQYISIE 83
BLAST of BQ623076 vs. ExPASy Swiss-Prot
Match: RL27_SYNP6 (50S ribosomal protein L27 OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=rpmA PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 6.408e-19 Identity = 48/77 (62.34%), Postives = 56/77 (72.73%), Query Frame = 2 Query: 74 ATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGMGKDHTLYALKEGRVKFEKHKLSGRK 304 A KK GST+NGRDS + LGVKKFGGE V G+IIVRQRGT+FHPG VG G D TL+AL +G V FE+ G+K Sbjct: 2 AHKKGTGSTRNGRDSNAQRLGVKKFGGEVVRSGSIIVRQRGTKFHPGVNVGRGGDDTLFALIDGVVTFERKGKGGKK 78
BLAST of BQ623076 vs. ExPASy Swiss-Prot
Match: RL27_SYNE7 (50S ribosomal protein L27 OS=Synechococcus elongatus (strain PCC 7942) GN=rpmA PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 6.408e-19 Identity = 48/77 (62.34%), Postives = 56/77 (72.73%), Query Frame = 2 Query: 74 ATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGMGKDHTLYALKEGRVKFEKHKLSGRK 304 A KK GST+NGRDS + LGVKKFGGE V G+IIVRQRGT+FHPG VG G D TL+AL +G V FE+ G+K Sbjct: 2 AHKKGTGSTRNGRDSNAQRLGVKKFGGEVVRSGSIIVRQRGTKFHPGVNVGRGGDDTLFALIDGVVTFERKGKGGKK 78 The following BLAST results are available for this feature:
BLAST of BQ623076 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >BQ623076 ID=BQ623076; Name=BQ623076; organism=Citrus sinensis; type=EST; length=540bpback to top |