BQ623076
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of BQ623076 vs. ExPASy Swiss-Prot
Match: RL27_GEOBB (50S ribosomal protein L27 OS=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) GN=rpmA PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 6.408e-19 Identity = 50/83 (60.24%), Postives = 59/83 (71.08%), Query Frame = 2 Query: 74 ATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGMGKDHTLYALKEGRVKFEKHKLSGRKWVHVEP 322 A KK GS++NGRDS + LG KKFGGE V GNII RQ GT+ HPG+ VG+GKD+TL+AL EG VKFE+ RK V V P Sbjct: 2 AHKKGVGSSRNGRDSDGQRLGCKKFGGEAVKAGNIIYRQHGTKIHPGNNVGLGKDYTLFALIEGVVKFERMG-KDRKKVSVYP 83
BLAST of BQ623076 vs. ExPASy Swiss-Prot
Match: RL27_CHRVO (50S ribosomal protein L27 OS=Chromobacterium violaceum GN=rpmA PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 6.408e-19 Identity = 47/86 (54.65%), Postives = 59/86 (68.60%), Query Frame = 2 Query: 74 ATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGMGKDHTLYALKEGRVKFEKHKLSGRKWVHVEPKEG 331 A KK GS++NGRDS+ K LGVK +G E + G+IIVRQRGT+FH G+ VG GKDHTL+A +G V+F RK V+V P G Sbjct: 2 AHKKAGGSSRNGRDSEAKRLGVKVYGSELIPAGSIIVRQRGTKFHAGENVGQGKDHTLFAKVDGYVEFTVKGAQQRKTVNVVPYTG 87
BLAST of BQ623076 vs. ExPASy Swiss-Prot
Match: RL27_CAMC5 (50S ribosomal protein L27 OS=Campylobacter curvus (strain 525.92) GN=rpmA PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 6.408e-19 Identity = 51/83 (61.45%), Postives = 59/83 (71.08%), Query Frame = 2 Query: 74 ATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGMGKDHTLYALKEGRVKFEKHKLSGRKWVHVEP 322 A KK GST+N RDS + LGVKKFGGE V GNII+RQRGT H G VG+GKDHT++AL +G VKFE+ K RK V V P Sbjct: 2 AHKKGQGSTQNNRDSIGRRLGVKKFGGEFVRAGNIIIRQRGTATHAGSNVGLGKDHTIFALIDGFVKFER-KDKNRKKVSVYP 83
BLAST of BQ623076 vs. ExPASy Swiss-Prot
Match: RL27_BORBZ (50S ribosomal protein L27 OS=Borrelia burgdorferi (strain ZS7) GN=rpmA PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 6.408e-19 Identity = 46/81 (56.79%), Postives = 61/81 (75.31%), Query Frame = 2 Query: 74 ATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGMGKDHTLYALKEGRVKFEKHKLSGRKWVHV 316 AT K+ GS+KNGRDS K LGVK+ GG+ V G IIVRQRGT+FH G VG+G+D+T++AL G+V+F+ L GRK+V + Sbjct: 2 ATSKSGGSSKNGRDSISKRLGVKRSGGQFVKAGEIIVRQRGTKFHKGKNVGLGRDYTIFALSSGKVEFK--TLKGRKYVSI 80
BLAST of BQ623076 vs. ExPASy Swiss-Prot
Match: RL27_BORBU (50S ribosomal protein L27 OS=Borrelia burgdorferi GN=rpmA PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 6.408e-19 Identity = 46/81 (56.79%), Postives = 61/81 (75.31%), Query Frame = 2 Query: 74 ATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGMGKDHTLYALKEGRVKFEKHKLSGRKWVHV 316 AT K+ GS+KNGRDS K LGVK+ GG+ V G IIVRQRGT+FH G VG+G+D+T++AL G+V+F+ L GRK+V + Sbjct: 2 ATSKSGGSSKNGRDSISKRLGVKRSGGQFVKAGEIIVRQRGTKFHKGKNVGLGRDYTIFALSSGKVEFK--TLKGRKYVSI 80
BLAST of BQ623076 vs. ExPASy Swiss-Prot
Match: RL27_BORAP (50S ribosomal protein L27 OS=Borrelia afzelii (strain PKo) GN=rpmA PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 6.408e-19 Identity = 46/81 (56.79%), Postives = 61/81 (75.31%), Query Frame = 2 Query: 74 ATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGMGKDHTLYALKEGRVKFEKHKLSGRKWVHV 316 AT K+ GS+KNGRDS K LGVK+ GG+ V G IIVRQRGT+FH G VG+G+D+T++AL G+V+F+ L GRK+V + Sbjct: 2 ATSKSGGSSKNGRDSISKRLGVKRSGGQFVKAGEIIVRQRGTKFHKGKNVGLGRDYTIFALSSGKVEFK--TLKGRKYVSI 80
BLAST of BQ623076 vs. ExPASy Swiss-Prot
Match: RL27_STRCO (50S ribosomal protein L27 OS=Streptomyces coelicolor GN=rpmA PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 8.369e-19 Identity = 48/83 (57.83%), Postives = 59/83 (71.08%), Query Frame = 2 Query: 74 ATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGMGKDHTLYALKEGRVKFEKHKLSGRKWVHVEP 322 A KK A ST+NGRDS + LGVK+FGG+ V G I+VRQRGT FHPG VG G D TL+AL+ G V+F H+ GRK V++ P Sbjct: 2 AHKKGASSTRNGRDSNAQRLGVKRFGGQAVNAGEILVRQRGTHFHPGAGVGRGGDDTLFALQAGAVQFGTHR--GRKVVNIVP 82
BLAST of BQ623076 vs. ExPASy Swiss-Prot
Match: RL27_HERA2 (50S ribosomal protein L27 OS=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) GN=rpmA PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 8.369e-19 Identity = 46/85 (54.12%), Postives = 63/85 (74.12%), Query Frame = 2 Query: 74 ATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGMGKDHTLYALKEGRVKFEKHKLSGRKWVHVEPKE 328 A KK GS++NGRDSKP+ G+K+FGGE V PG+IIVRQ GT+ PG VG+G+D+T+Y++ +G VKFE + + +K V V P E Sbjct: 2 AHKKGVGSSRNGRDSKPQMRGIKRFGGELVQPGSIIVRQCGTKVRPGANVGLGRDYTIYSMIDGHVKFEDYSRT-QKMVSVVPAE 85
BLAST of BQ623076 vs. ExPASy Swiss-Prot
Match: RL27_GEOSM (50S ribosomal protein L27 OS=Geobacter sp. (strain M21) GN=rpmA PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 8.369e-19 Identity = 50/83 (60.24%), Postives = 59/83 (71.08%), Query Frame = 2 Query: 74 ATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGMGKDHTLYALKEGRVKFEKHKLSGRKWVHVEP 322 A KK GS++NGRDS + LG KKFGGE V GNII RQ GT+ HPG+ VG+GKD+TL+AL EG VKFE+ RK V V P Sbjct: 2 AHKKGVGSSRNGRDSDGQRLGCKKFGGEAVKAGNIIYRQHGTKIHPGNNVGLGKDYTLFALIEGVVKFERMG-RDRKKVSVYP 83
BLAST of BQ623076 vs. ExPASy Swiss-Prot
Match: RL27_GEOSF (50S ribosomal protein L27 OS=Geobacter sp. (strain FRC-32) GN=rpmA PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 8.369e-19 Identity = 45/70 (64.29%), Postives = 54/70 (77.14%), Query Frame = 2 Query: 74 ATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGMGKDHTLYALKEGRVKFEK 283 A KK GS++NGRDS + LG KKFGGE V GNII RQ GT+ HPG+ VG+GKD+TL+AL EG VKFE+ Sbjct: 2 AHKKGVGSSRNGRDSDGQRLGCKKFGGEHVKAGNIIYRQHGTKIHPGNNVGLGKDYTLFALIEGVVKFER 71 The following BLAST results are available for this feature:
BLAST of BQ623076 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >BQ623076 ID=BQ623076; Name=BQ623076; organism=Citrus sinensis; type=EST; length=540bpback to top |