BQ623076
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of BQ623076 vs. ExPASy Swiss-Prot
Match: RL27_HAEI8 (50S ribosomal protein L27 OS=Haemophilus influenzae (strain 86-028NP) GN=rpmA PE=3 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 1.128e-23 Identity = 51/81 (62.96%), Postives = 64/81 (79.01%), Query Frame = 2 Query: 74 ATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGMGKDHTLYALKEGRVKFEKHKLSGRKWVHV 316 ATKK GST+NGRDS+ K LGVK+FGGE V+ G+IIVRQRGT+FH G+ VGMG+DHTL+A +G+VKFE RK+V + Sbjct: 2 ATKKAGGSTRNGRDSEAKRLGVKRFGGESVLAGSIIVRQRGTKFHAGNNVGMGRDHTLFATADGKVKFEVKGEKSRKYVSI 82
BLAST of BQ623076 vs. ExPASy Swiss-Prot
Match: RL27_AGRVS (50S ribosomal protein L27 OS=Agrobacterium vitis (strain S4 / ATCC BAA-846) GN=rpmA PE=3 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 1.128e-23 Identity = 55/84 (65.48%), Postives = 66/84 (78.57%), Query Frame = 2 Query: 74 ATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGMGKDHTLYALKEGRVKFEKHKLSGRKWVHVEPK 325 A KK GS++NGRDS+ K LGVKKFGGE VIPGNIIVRQRGT++HPG VGMGKDHT++AL G V + + K +GR +V V PK Sbjct: 2 AHKKAGGSSRNGRDSESKRLGVKKFGGEVVIPGNIIVRQRGTQWHPGANVGMGKDHTIFALTTGNVTY-RTKSNGRVFVSVMPK 84
BLAST of BQ623076 vs. ExPASy Swiss-Prot
Match: RL27_YERE8 (50S ribosomal protein L27 OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=rpmA PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 1.474e-23 Identity = 52/82 (63.41%), Postives = 64/82 (78.05%), Query Frame = 2 Query: 74 ATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGMGKDHTLYALKEGRVKFEKHKLSGRKWVHVE 319 A KK GST+NGRDS+ K LGVK+FGGE V+ G+IIVRQRGT+FH G VG GKDHTL+ALK+G+VKFE RK++ +E Sbjct: 2 AHKKAGGSTRNGRDSESKRLGVKRFGGEAVLAGSIIVRQRGTKFHAGIDVGCGKDHTLFALKDGKVKFEVKGPKNRKFISIE 83
BLAST of BQ623076 vs. ExPASy Swiss-Prot
Match: RL27_VIBSL (50S ribosomal protein L27 OS=Vibrio splendidus (strain LGP32) GN=rpmA PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 1.474e-23 Identity = 53/82 (64.63%), Postives = 62/82 (75.61%), Query Frame = 2 Query: 74 ATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGMGKDHTLYALKEGRVKFEKHKLSGRKWVHVE 319 A KK GST NGRDS+ K LGVK+FGGE V+ GNIIVRQRGT+FH G VG+GKDHTL+AL EG+VKF RK+V +E Sbjct: 2 AHKKAGGSTNNGRDSESKRLGVKRFGGESVLAGNIIVRQRGTKFHAGTNVGIGKDHTLFALTEGKVKFAVKGPKNRKFVSIE 83
BLAST of BQ623076 vs. ExPASy Swiss-Prot
Match: RL27_SHEWM (50S ribosomal protein L27 OS=Shewanella woodyi (strain ATCC 51908 / MS32) GN=rpmA PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 1.474e-23 Identity = 51/82 (62.20%), Postives = 65/82 (79.27%), Query Frame = 2 Query: 74 ATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGMGKDHTLYALKEGRVKFEKHKLSGRKWVHVE 319 A KK GST+NGRDS+ K LGVK+FGGE V+ GNIIVRQRGT+FH G VG+G+DHTL+AL +G+VKFE + RK++ +E Sbjct: 2 AHKKAGGSTRNGRDSESKRLGVKRFGGESVLAGNIIVRQRGTKFHAGVNVGVGRDHTLFALTDGKVKFEVKGPNNRKFISIE 83
BLAST of BQ623076 vs. ExPASy Swiss-Prot
Match: RL27_SHESW (50S ribosomal protein L27 OS=Shewanella sp. (strain W3-18-1) GN=rpmA PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 1.474e-23 Identity = 51/82 (62.20%), Postives = 65/82 (79.27%), Query Frame = 2 Query: 74 ATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGMGKDHTLYALKEGRVKFEKHKLSGRKWVHVE 319 A KK GST+NGRDS+ K LGVK+FGGE V+ GNIIVRQRGT+FH G VG+G+DHTL+AL +G+VKFE + RK++ +E Sbjct: 2 AHKKAGGSTRNGRDSESKRLGVKRFGGESVLAGNIIVRQRGTKFHAGVNVGIGRDHTLFALTDGKVKFEVKGPNNRKFISIE 83
BLAST of BQ623076 vs. ExPASy Swiss-Prot
Match: RL27_SHESR (50S ribosomal protein L27 OS=Shewanella sp. (strain MR-7) GN=rpmA PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 1.474e-23 Identity = 51/82 (62.20%), Postives = 65/82 (79.27%), Query Frame = 2 Query: 74 ATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGMGKDHTLYALKEGRVKFEKHKLSGRKWVHVE 319 A KK GST+NGRDS+ K LGVK+FGGE V+ GNIIVRQRGT+FH G VG+G+DHTL+AL +G+VKFE + RK++ +E Sbjct: 2 AHKKAGGSTRNGRDSESKRLGVKRFGGESVLAGNIIVRQRGTKFHAGVNVGVGRDHTLFALTDGKVKFEVKGPNNRKFISIE 83
BLAST of BQ623076 vs. ExPASy Swiss-Prot
Match: RL27_SHESM (50S ribosomal protein L27 OS=Shewanella sp. (strain MR-4) GN=rpmA PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 1.474e-23 Identity = 51/82 (62.20%), Postives = 65/82 (79.27%), Query Frame = 2 Query: 74 ATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGMGKDHTLYALKEGRVKFEKHKLSGRKWVHVE 319 A KK GST+NGRDS+ K LGVK+FGGE V+ GNIIVRQRGT+FH G VG+G+DHTL+AL +G+VKFE + RK++ +E Sbjct: 2 AHKKAGGSTRNGRDSESKRLGVKRFGGESVLAGNIIVRQRGTKFHAGVNVGVGRDHTLFALTDGKVKFEVKGPNNRKFISIE 83
BLAST of BQ623076 vs. ExPASy Swiss-Prot
Match: RL27_SHESA (50S ribosomal protein L27 OS=Shewanella sp. (strain ANA-3) GN=rpmA PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 1.474e-23 Identity = 51/82 (62.20%), Postives = 65/82 (79.27%), Query Frame = 2 Query: 74 ATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGMGKDHTLYALKEGRVKFEKHKLSGRKWVHVE 319 A KK GST+NGRDS+ K LGVK+FGGE V+ GNIIVRQRGT+FH G VG+G+DHTL+AL +G+VKFE + RK++ +E Sbjct: 2 AHKKAGGSTRNGRDSESKRLGVKRFGGESVLAGNIIVRQRGTKFHAGVNVGIGRDHTLFALTDGKVKFEVKGPNNRKFISIE 83
BLAST of BQ623076 vs. ExPASy Swiss-Prot
Match: RL27_SHEPC (50S ribosomal protein L27 OS=Shewanella putrefaciens (strain CN-32 / ATCC BAA-453) GN=rpmA PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 1.474e-23 Identity = 51/82 (62.20%), Postives = 65/82 (79.27%), Query Frame = 2 Query: 74 ATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGMGKDHTLYALKEGRVKFEKHKLSGRKWVHVE 319 A KK GST+NGRDS+ K LGVK+FGGE V+ GNIIVRQRGT+FH G VG+G+DHTL+AL +G+VKFE + RK++ +E Sbjct: 2 AHKKAGGSTRNGRDSESKRLGVKRFGGESVLAGNIIVRQRGTKFHAGVNVGIGRDHTLFALTDGKVKFEVKGPNNRKFISIE 83 The following BLAST results are available for this feature:
BLAST of BQ623076 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >BQ623076 ID=BQ623076; Name=BQ623076; organism=Citrus sinensis; type=EST; length=540bpback to top |