BQ623083

Overview
NameBQ623083
Unique NameBQ623083
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length733
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig4376 contig Csv1_Contig4376:189..920. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623083 vs. ExPASy Swiss-Prot
Match: TCTP_ARATH (Translationally-controlled tumor protein homolog OS=Arabidopsis thaliana GN=TCTP PE=1 SV=2)

HSP 1 Score: 233.417 bits (594), Expect = 9.601e-61
Identity = 114/156 (73.08%), Postives = 125/156 (80.13%), Query Frame = 2
Query:   95 ILSDSFPYKEIENGILWEVEGKWVVQGAVDVDIGANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAFDKKPFVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYMADALKEVKC 562
            +LSDSFPYKEIENGILWEVEGKWV  GAVDV+IGANPS               KVVDIVDTFRLQEQP +DKK F+ Y+K++IKLLTPKLSEE Q +FKK IEGATKFLL +LSD QFFVGE MHDD  LVFAYYKEG+T+PTFLY A  LKEVKC
Sbjct:   13 LLSDSFPYKEIENGILWEVEGKWVTVGAVDVNIGANPSAEEGGEDEGVDDSTQKVVDIVDTFRLQEQPTYDKKGFIAYIKKYIKLLTPKLSEEDQAVFKKGIEGATKFLLPRLSDFQFFVGEGMHDDSTLVFAYYKEGSTNPTFLYFAHGLKEVKC 168          
BLAST of BQ623083 vs. ExPASy Swiss-Prot
Match: TCTP_HORVU (Translationally-controlled tumor protein homolog OS=Hordeum vulgare GN=TCTP PE=2 SV=2)

HSP 1 Score: 229.95 bits (585), Expect = 1.583e-60
Identity = 111/156 (71.15%), Postives = 124/156 (79.49%), Query Frame = 2
Query:   95 ILSDSFPYKEIENGILWEVEGKWVVQGAVDVDIGANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAFDKKPFVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYMADALKEVKC 562
            +LSDSFPY+E+ENG+LWEV+G WVVQGAVDVDIGANPS               KVVDIVDTFRLQEQPAFDKK F+ Y+KR+IK LT KL  E  + FKKN+E ATK+LLSKL DLQFFVGESMHDDG +VFAYY+EGA DPTFLY A  LKEVKC
Sbjct:   13 LLSDSFPYRELENGVLWEVDGHWVVQGAVDVDIGANPSAEGGGEDEGVDDQAVKVVDIVDTFRLQEQPAFDKKQFIAYIKRYIKNLTAKLEGEELDAFKKNVESATKYLLSKLKDLQFFVGESMHDDGSVVFAYYREGAADPTFLYFAHGLKEVKC 168          

HSP 2 Score: 24.2534 bits (51), Expect = 1.583e-60
Identity = 10/12 (83.33%), Postives = 11/12 (91.67%), Query Frame = 1
Query:   58 MLVYQDLLTGDE 93
            MLVYQD L+GDE
Sbjct:    1 MLVYQDKLSGDE 12          
BLAST of BQ623083 vs. ExPASy Swiss-Prot
Match: TCTP_FRAAN (Translationally-controlled tumor protein homolog OS=Fragaria ananassa GN=TCTP PE=2 SV=1)

HSP 1 Score: 232.646 bits (592), Expect = 1.638e-60
Identity = 119/158 (75.32%), Postives = 128/158 (81.01%), Query Frame = 2
Query:   95 ILSDSFPYKEIENGILWEVEGKWVVQGAVDVDIGANPSXXXXXXXXXXXXXXX--KVVDIVDTFRLQEQPAFDKKPFVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYMADALKEVKC 562
            +LSDSFPYKEI+NG+LWEV+GKWVVQGAVDVDIGANPS                 KVVDIVDTFRLQEQP FDKK FVT++KR+IKLLTPKL  E+QE FKKNIEGATKFLLSKLSDLQFFVGESM DD  LVFA YKEGATDP F+Y A  LKEVKC
Sbjct:   13 LLSDSFPYKEIQNGVLWEVDGKWVVQGAVDVDIGANPSAEGADADADEGVDDQTVKVVDIVDTFRLQEQPPFDKKQFVTWVKRYIKLLTPKLEGEQQETFKKNIEGATKFLLSKLSDLQFFVGESMGDDTSLVFASYKEGATDPIFIYFAHGLKEVKC 170          
BLAST of BQ623083 vs. ExPASy Swiss-Prot
Match: TCTP_WHEAT (Translationally-controlled tumor protein homolog OS=Triticum aestivum GN=TCTP PE=2 SV=1)

HSP 1 Score: 228.409 bits (581), Expect = 4.576e-60
Identity = 110/156 (70.51%), Postives = 126/156 (80.77%), Query Frame = 2
Query:   95 ILSDSFPYKEIENGILWEVEGKWVVQGAVDVDIGANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAFDKKPFVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYMADALKEVKC 562
            +LSDSFPY+E+ENG+LWEV+G WVVQGAVDVDIGANPS               KVVDIVDTFRLQEQPAFDKK F+++MKR+IK L+ KL  +  ++FKKN+E ATK+LLSKL DLQFFVGESMHDDG +VFAYYKEGA DPTFLY A  LKEVKC
Sbjct:   13 LLSDSFPYRELENGVLWEVDGHWVVQGAVDVDIGANPSAEGGGDDEGVDDQAVKVVDIVDTFRLQEQPAFDKKQFISHMKRYIKNLSAKLEGDDLDVFKKNVESATKYLLSKLKDLQFFVGESMHDDGGVVFAYYKEGAADPTFLYFAHGLKEVKC 168          

HSP 2 Score: 24.2534 bits (51), Expect = 4.576e-60
Identity = 10/12 (83.33%), Postives = 11/12 (91.67%), Query Frame = 1
Query:   58 MLVYQDLLTGDE 93
            MLVYQD L+GDE
Sbjct:    1 MLVYQDKLSGDE 12          
BLAST of BQ623083 vs. ExPASy Swiss-Prot
Match: TCTP_TOBAC (Translationally-controlled tumor protein homolog OS=Nicotiana tabacum GN=TCTP PE=2 SV=1)

HSP 1 Score: 225.328 bits (573), Expect = 7.779e-60
Identity = 110/154 (71.43%), Postives = 125/154 (81.17%), Query Frame = 2
Query:  101 SDSFPYKEIENGILWEVEGKWVVQGAVDVDIGANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAFDKKPFVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYMADALKEVKC 562
            SDSF Y E+ NG+LWEV+GKWVVQGAVDV+IGANPS               KVVDIVDTFRLQEQP+FDKK FV YMK++IK LTPKL  E++E+FK NI+GATK+LLSKLSDLQFFVGESM DD  +VFAYYK+GATDPTFLY+A  LKEVKC
Sbjct:   15 SDSFSYTELGNGVLWEVQGKWVVQGAVDVNIGANPSAEGADEDEGVDDQAIKVVDIVDTFRLQEQPSFDKKQFVAYMKKYIKNLTPKLGAEQEEVFKNNIQGATKYLLSKLSDLQFFVGESMADDTGMVFAYYKDGATDPTFLYLAHGLKEVKC 168          

HSP 2 Score: 26.5646 bits (57), Expect = 7.779e-60
Identity = 11/12 (91.67%), Postives = 12/12 (100.00%), Query Frame = 1
Query:   58 MLVYQDLLTGDE 93
            MLVYQDLL+GDE
Sbjct:    1 MLVYQDLLSGDE 12          
BLAST of BQ623083 vs. ExPASy Swiss-Prot
Match: TCTP_BRAOL (Translationally-controlled tumor protein homolog OS=Brassica oleracea GN=TCTP PE=2 SV=1)

HSP 1 Score: 227.639 bits (579), Expect = 5.268e-59
Identity = 110/156 (70.51%), Postives = 123/156 (78.85%), Query Frame = 2
Query:   95 ILSDSFPYKEIENGILWEVEGKWVVQGAVDVDIGANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAFDKKPFVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYMADALKEVKC 562
            +LSDSFPYKEIENGILWEVEGKW  +G V+V+IGANPS               KVVDIVDTFRLQEQP +DKK F+ Y+K++IKLLTPKL+ E+QE FKK IEGATKFLL KL D QFFVGE MHDD  +VFAYYKEGAT+PTFLY A  LKEVKC
Sbjct:   13 LLSDSFPYKEIENGILWEVEGKWTTKGCVEVNIGANPSAEEGGEDEGVDDSVEKVVDIVDTFRLQEQPTYDKKGFIAYIKKYIKLLTPKLTPEQQEEFKKGIEGATKFLLPKLKDFQFFVGEGMHDDSTIVFAYYKEGATNPTFLYFAHGLKEVKC 168          
BLAST of BQ623083 vs. ExPASy Swiss-Prot
Match: TCTP_CUCME (Translationally-controlled tumor protein homolog OS=Cucumis melo GN=TCTP PE=2 SV=1)

HSP 1 Score: 219.935 bits (559), Expect = 7.073e-58
Identity = 108/156 (69.23%), Postives = 123/156 (78.85%), Query Frame = 2
Query:   95 ILSDSFPYKEIENGILWEVEGKWVVQGAVDVDIGANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAFDKKPFVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYMADALKEVKC 562
            +LSDSFPYKEIENG++WEVEGKWVV+GAVDVDIGANPS               KVVDIVDTFRLQEQP+ DKK F++ +K++IK LTP L  E+QE FK  IEGA K+LL K+ DLQFFVGESM DD  +VFAYYKEGATDPTFLY+A  LKEVKC
Sbjct:   13 LLSDSFPYKEIENGMIWEVEGKWVVKGAVDVDIGANPSAEGGGEDEGVDDQAVKVVDIVDTFRLQEQPSMDKKVFLSCIKKYIKKLTPLLQGEQQEAFKNKIEGAVKYLLPKVKDLQFFVGESMADDSAMVFAYYKEGATDPTFLYIAPGLKEVKC 168          

HSP 2 Score: 25.409 bits (54), Expect = 7.073e-58
Identity = 10/12 (83.33%), Postives = 12/12 (100.00%), Query Frame = 1
Query:   58 MLVYQDLLTGDE 93
            MLVYQDL++GDE
Sbjct:    1 MLVYQDLVSGDE 12          
BLAST of BQ623083 vs. ExPASy Swiss-Prot
Match: TCTP_MAIZE (Translationally-controlled tumor protein homolog OS=Zea mays GN=TCTP PE=2 SV=1)

HSP 1 Score: 208.764 bits (530), Expect = 2.532e-53
Identity = 104/156 (66.67%), Postives = 119/156 (76.28%), Query Frame = 2
Query:   95 ILSDSFPYKEIENGILWEVEGKWVVQGAVDVDIGANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAFDKKPFVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYMADALKEVKC 562
            +LSDSF YKE+ENG+LWEVEGKWV QG VDVDIGANPS               KVVDIVDTFRLQEQP FDKK FV+Y+K++IK LT  L  E+ + FKK +EGATKFLLSKL DLQFFVGESM DD  + FAYYK+GAT+ TFLY +  LKE+KC
Sbjct:   13 LLSDSFTYKELENGVLWEVEGKWVTQGPVDVDIGANPSAEGGEDESVDDTAV-KVVDIVDTFRLQEQPPFDKKSFVSYIKKYIKNLTAVLEPEKADEFKKGVEGATKFLLSKLKDLQFFVGESMKDDASVAFAYYKDGATNSTFLYFSHGLKEIKC 167          
BLAST of BQ623083 vs. ExPASy Swiss-Prot
Match: TCTP_CRYNE (Translationally-controlled tumor protein homolog OS=Cryptococcus neoformans GN=CNM01460 PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.950e-20
Identity = 56/158 (35.44%), Postives = 88/158 (55.70%), Query Frame = 2
Query:   95 ILSDSFPYKEIENGILWEVEGKWVVQGAVDVDIGANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAFDKKPFVTYMKRFIKLLTPKLSE---ERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYMADALKEVK 559
            ++SD+FP KEI + I +EV+   ++    DVDIG NPS               +V ++V +FRLQ   +FDKK ++TY+K ++K +  KL E   +R   F+K  +   K +++   D +F++GESM+ DG +    Y+E    P F    D LKE+K
Sbjct:   13 MISDAFPIKEIGD-IAYEVDCANIIIKEGDVDIGGNPSAEEAAEALEEGAQ--QVNNVVHSFRLQST-SFDKKSYLTYLKGYMKAIKSKLQESNPDRVAAFEKGAQDFAKKIVANFKDYEFYIGESMNPDGMVCLLNYREDGVTPYFTMWKDGLKEIK 166          

HSP 2 Score: 26.5646 bits (57), Expect = 1.950e-20
Identity = 10/12 (83.33%), Postives = 12/12 (100.00%), Query Frame = 1
Query:   58 MLVYQDLLTGDE 93
            ML+YQD+LTGDE
Sbjct:    1 MLIYQDVLTGDE 12          
BLAST of BQ623083 vs. ExPASy Swiss-Prot
Match: TCTP1_DICDI (Translationally-controlled tumor protein homolog 1 OS=Dictyostelium discoideum GN=DDB_G0282853 PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 3.691e-20
Identity = 58/160 (36.25%), Postives = 88/160 (55.00%), Query Frame = 2
Query:   95 ILSDSFPYKEIENGILWEVEGKWV-VQGAVDVDIGANPSXXXXXXXXXXXXXXXK-VVDIVDTFRLQEQPAFDKKPFVTYMKRFIKLLTPKLSEE---RQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYMADALKEVK 559
            + SD++P  EI NG+++EV+ K V +   V V+ GAN +               K V+++VD  RL E  +FDKK +  Y+K ++K +  KL++    R + FKK+     K +L K  + +F+ GE+M  DG +   YYK G  DP FLY  D L+ VK
Sbjct:   15 LCSDAYPMTEINNGLIYEVQAKMVTIDLDVKVNTGANAASEETEEDEGVDNAGSKQVINVVDAMRLVET-SFDKKSYTGYIKAYMKEVLAKLADNNPSRVDAFKKDAADFVKSVLGKFDEYKFYTGENMDADGHVALMYYKPGEVDPIFLYFKDGLESVK 173          
The following BLAST results are available for this feature:
BLAST of BQ623083 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 60
Match NameE-valueIdentityDescription
TCTP_ARATH9.601e-6173.08Translationally-controlled tumor protein homolog O... [more]
TCTP_HORVU1.583e-6071.15Translationally-controlled tumor protein homolog O... [more]
TCTP_FRAAN1.638e-6075.32Translationally-controlled tumor protein homolog O... [more]
TCTP_WHEAT4.576e-6070.51Translationally-controlled tumor protein homolog O... [more]
TCTP_TOBAC7.779e-6071.43Translationally-controlled tumor protein homolog O... [more]
TCTP_BRAOL5.268e-5970.51Translationally-controlled tumor protein homolog O... [more]
TCTP_CUCME7.073e-5869.23Translationally-controlled tumor protein homolog O... [more]
TCTP_MAIZE2.532e-5366.67Translationally-controlled tumor protein homolog O... [more]
TCTP_CRYNE1.950e-2035.44Translationally-controlled tumor protein homolog O... [more]
TCTP1_DICDI3.691e-2036.25Translationally-controlled tumor protein homolog 1... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00174 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00174 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623083 ID=BQ623083; Name=BQ623083; organism=Citrus sinensis; type=EST; length=733bp
TCCAGTTTTCTCCGTTGATTATTTTTCTTTTTTGTGTTCGCGAGAGAGAC
TGCAATCATGTTGGTCTATCAAGATCTCCTCACCGGTGATGAGCATTCTC
TCCGATTCTTTTCCCTACAAGGAAATTGAGAATGGGATTCTGTGGGAAGT
TGAGGGAAAGTGGGTTGTACAAGGAGCCGTTGATGTTGACATTGGTGCAA
ATCCTTCTGCCGAAGGAGCTGATGAGGATGAGGGTGTTGATGACCAAGCC
GTGAAGGTGGTTGACATTGTCGACACATTCAGGCTACAGGAGCAACCCGC
TTTTGACAAGAAGCCGTTTGTAACATACATGAAGAGATTCATCAAGTTGC
TGACGCCCAAGCTGAGTGAGGAGAGGCAGGAGATATTTAAGAAGAATATT
GAGGGAGCGACCAAGTTCTTGCTCTCGAAGCTCAGTGACCTTCAATTCTT
TGTTGGGGAGAGCATGCATGATGATGGCTGTCTTGTCTTTGCTTACTACA
AGGAAGGTGCGACCGACCCAACATTTTTGTATATGGCTGATGCATTGAAG
GAGGTGAAGTGCTAAGCTGGGCTTCGAAGAAGAAGTGCCTGCTGTAGTTC
TAATTTTAATTATTGCCCGCGGTTATTTTTATGTATCTTTTGTGCTGGTT
TACTCGGGACTTGTGCTTGCTGTTTTTTAGTTTTTATTTTGACATAAACA
ATATGTTTTTCTGCTCTTAATTATTGGGTTTTA
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