BQ623083

Overview
NameBQ623083
Unique NameBQ623083
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length733
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623083 vs. ExPASy Swiss-Prot
Match: TCTP_GIBZE (Translationally-controlled tumor protein homolog OS=Gibberella zeae GN=FG02523 PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.307e-18
Identity = 58/161 (36.02%), Postives = 88/161 (54.66%), Query Frame = 2
Query:   95 ILSDSFPYKEIENGILWEVEGKWVVQGAVDVDIGANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAFDKKPFVTYMKRFIKLLTPKLSEERQ--EIFKKNIEGATKF----LLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYMADALKEVK 559
            ++SDS+  KE++ GI++E +   + +GAV+V+IGAN S               KV +IV++FRLQ    FDKK ++ Y+K ++K +  KL E     E  K    GA+KF    ++ K  D +F+ GESM  DG +V   Y+E    P  ++    LKE K
Sbjct:   13 LISDSYDLKEVD-GIVYEADCAMIEEGAVEVNIGANASAEEAAEDLDDGAV--KVNNIVNSFRLQST-TFDKKSYLAYLKGYMKAIKAKLQENGSSAEDIKAFETGASKFVKDTIVPKFKDFEFYTGESMDPDGMVVLLNYREDGVTPYTIFWKHGLKETK 169          

HSP 2 Score: 23.0978 bits (48), Expect = 1.307e-18
Identity = 8/12 (66.67%), Postives = 10/12 (83.33%), Query Frame = 1
Query:   58 MLVYQDLLTGDE 93
            ML+Y D+L GDE
Sbjct:    1 MLIYNDILNGDE 12          
BLAST of BQ623083 vs. ExPASy Swiss-Prot
Match: TCTP_NEUCR (Translationally-controlled tumor protein homolog OS=Neurospora crassa GN=NCU06464 PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 6.322e-18
Identity = 58/161 (36.02%), Postives = 85/161 (52.80%), Query Frame = 2
Query:   95 ILSDSFPYKEIENGILWEVEGKWVVQGAVDVDIGANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAFDKKPFVTYMKRFIKLLTPKLSE------ERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYMADALKEVK 559
            I+SDS+  KE++ GI +EV+   + +GAV VDIGAN S               KV ++V +FRLQ    FDKK ++ Y+K ++K +   L E      E ++   K    A   +L+K  D +F+ GESM+ DG +V   Y+E  T P  +     LKE K
Sbjct:   13 IISDSYDLKEVD-GIAYEVDCAMIEEGAVQVDIGANASAEEADEALDDGVV--KVNNVVHSFRLQSTQ-FDKKGYLVYLKGYMKSVKNALKEQGKSDEEIKDFETKASAFAKNVILAKFKDWEFYTGESMNPDGMVVLLNYREDGTTPYVVVWKHGLKETK 169          

HSP 2 Score: 24.2534 bits (51), Expect = 6.322e-18
Identity = 8/12 (66.67%), Postives = 11/12 (91.67%), Query Frame = 1
Query:   58 MLVYQDLLTGDE 93
            ML+Y D++TGDE
Sbjct:    1 MLIYSDIITGDE 12          
BLAST of BQ623083 vs. ExPASy Swiss-Prot
Match: TCTP_DANRE (Translationally-controlled tumor protein homolog OS=Danio rerio GN=tpt1 PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 3.973e-17
Identity = 54/162 (33.33%), Postives = 80/162 (49.38%), Query Frame = 2
Query:   95 ILSDSFPYKEIENGILWEVEGKWVVQGAVDVD---IGANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAFDKKPFVTYMKRFIKLLTPKLSEE---RQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYMADALKEVKC 562
            + SD +  KE ENG++ EVEGK + +   D+D   IG N S                 VDIV   +LQE  ++DKK +  Y+K ++K +  KL E    R + F  N     K +L  + + QFF GESM+ DG +    ++E    P  ++  D L+  KC
Sbjct:   13 MFSDIYKIKESENGMMLEVEGKMITRAEGDIDDALIGGNASAEVADEGCDSTSVSG--VDIVLNHKLQET-SYDKKSYTAYIKDYMKAVKAKLQESAPNRVDPFMANAPAEVKKILGNIKNFQFFTGESMNPDGMIGLLDFREDGVTPYMIFFKDGLEIEKC 171          

HSP 2 Score: 23.8682 bits (50), Expect = 3.973e-17
Identity = 7/12 (58.33%), Postives = 12/12 (100.00%), Query Frame = 1
Query:   58 MLVYQDLLTGDE 93
            M++Y+D++TGDE
Sbjct:    1 MIIYKDIITGDE 12          
BLAST of BQ623083 vs. ExPASy Swiss-Prot
Match: TCTP_KLULA (Translationally-controlled tumor protein homolog OS=Kluyveromyces lactis GN=KLLA0C12716g PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 6.722e-17
Identity = 52/145 (35.86%), Postives = 80/145 (55.17%), Query Frame = 2
Query:   95 ILSDSFPYKEIENGILWEVEGKWVVQGAVDVDIGANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAFDKKPFVTYMKRFIKLLTPKLSEERQE---IFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDP 520
            +LSD++  K ++ G+++E +   V  G  ++DIGANPS                V ++V +FRLQ Q AFDKK F+TY+K ++K +  +L E   +   +F+K  +   K ++    D +FF GESM  DG LV   Y+E  T P
Sbjct:   13 LLSDAYDLKLVD-GVIYEADCDMVKVGGDNIDIGANPSAEDGGDDVEDGTEL--VNNVVHSFRLQ-QTAFDKKSFLTYIKGYMKEIKGRLQESNPDEVSVFEKGAQAYVKKVIGSFKDWEFFTGESMDPDGMLVLLNYREDGTTP 153          

HSP 2 Score: 21.557 bits (44), Expect = 6.722e-17
Identity = 6/12 (50.00%), Postives = 11/12 (91.67%), Query Frame = 1
Query:   58 MLVYQDLLTGDE 93
            M++Y D+++GDE
Sbjct:    1 MIIYTDIISGDE 12          
BLAST of BQ623083 vs. ExPASy Swiss-Prot
Match: TCTP_LABRO (Translationally-controlled tumor protein homolog OS=Labeo rohita GN=tpt1 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 8.731e-17
Identity = 54/162 (33.33%), Postives = 81/162 (50.00%), Query Frame = 2
Query:   95 ILSDSFPYKEIENGILWEVEGKWVVQGAVDVD---IGANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAFDKKPFVTYMKRFIKLLTPKLSE---ERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYMADALKEVKC 562
            + SD +  KE ENG++ EVEGK + +   ++D   IG N S                 VDIV   +LQE  ++DKK +  Y+K ++K +  KL E   +R + F  N     K +L  + + QFF GESM+ DG +    ++E    P  L+  D L+  KC
Sbjct:   13 MFSDIYKIKESENGMMIEVEGKMISRAEGEIDDALIGGNASAEVQDEGCESTTVSG--VDIVLNHKLQET-SYDKKSYTAYIKDYMKAVKAKLQEVAPDRVDPFMANAPAEVKKILGNIKNFQFFTGESMNPDGMIGLLDFREDGVTPYMLFFKDGLEIEKC 171          

HSP 2 Score: 23.8682 bits (50), Expect = 8.731e-17
Identity = 7/12 (58.33%), Postives = 12/12 (100.00%), Query Frame = 1
Query:   58 MLVYQDLLTGDE 93
            M++Y+D++TGDE
Sbjct:    1 MIIYKDIITGDE 12          
BLAST of BQ623083 vs. ExPASy Swiss-Prot
Match: TCTP_USTMA (Translationally-controlled tumor protein homolog OS=Ustilago maydis GN=UM01283 PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.233e-16
Identity = 52/156 (33.33%), Postives = 83/156 (53.21%), Query Frame = 2
Query:  101 SDSFPYKEIENGILWEVEGKWVVQGAVDVDIGANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAFDKKPFVTYMKRFIKLLTPKLSE---ERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYMADALKEVK 559
            SD +  K +E+ +++EV+   +V    DVDIGANPS               +V++IV +FRLQ    FDKK ++ Y+K ++K +  KL+E   +R   F+K      K ++   +D +FF GESM  +G +    Y+E    P  ++  D L+E K
Sbjct:    3 SDGYEMKLVED-VVYEVDAAKIVVSDGDVDIGANPSAEEAAEALENGAE--QVINIVHSFRLQSTQ-FDKKSYLAYLKGYMKSVKAKLAESNPDRVPAFEKGAAAFAKKIVGSFNDWEFFTGESMDPEGMVALLNYREDGVTPYLVFWKDGLRETK 154          
BLAST of BQ623083 vs. ExPASy Swiss-Prot
Match: TCTP_SCHPO (Translationally-controlled tumor protein homolog OS=Schizosaccharomyces pombe GN=p23fy PE=1 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 7.128e-16
Identity = 53/159 (33.33%), Postives = 87/159 (54.72%), Query Frame = 2
Query:   95 ILSDSFPYKEIENGILWEVEGKWV-VQGAVDVDIGANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAFDKKPFVTYMKRFIKLLTPKLSE---ERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYMADALKEVK 559
            ++SD++  KE+++ I++E + + V V+   DVDIGANPS                V ++V +FRL    +FDKK +++Y+K ++K +  +L E   ER  +F+KN  G  K +L+   D  F++GESM  D  +V   Y+E    P  ++  D L   K
Sbjct:   13 LVSDAYDLKEVDD-IVYEADCQMVTVKQGGDVDIGANPSAEDAEENAEEGTET--VNNLVYSFRLSPT-SFDKKSYMSYIKGYMKAIKARLQESNPERVPVFEKNAIGFVKKILANFKDYDFYIGESMDPDAMVVLMNYREDGITPYMIFFKDGLVSEK 167          

HSP 2 Score: 21.9422 bits (45), Expect = 7.128e-16
Identity = 7/12 (58.33%), Postives = 12/12 (100.00%), Query Frame = 1
Query:   58 MLVYQDLLTGDE 93
            ML+Y+D+++GDE
Sbjct:    1 MLLYKDVISGDE 12          
BLAST of BQ623083 vs. ExPASy Swiss-Prot
Match: TCTP_AEDAL (Translationally-controlled tumor protein homolog OS=Aedes albopictus GN=Tctp PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.605e-15
Identity = 60/161 (37.27%), Postives = 81/161 (50.31%), Query Frame = 2
Query:   95 ILSDSFPYKEIENGILWEVEGKWVVQGAVDVDI-GANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAFDKKPFVTYMKRFIKLLTPKLSEERQ---EIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYK--EGATDPTFLYMADALKEVK 559
            + SD++  K I+N +++EV GK V +   DV + GANPS                 VDIV   RL E    DKK F TY+K ++K L  +L E      E+FK NI    K LL +  DLQFF GESM  +G +    Y+  +G + P  L     L+E K
Sbjct:   13 MFSDTYKVKLIDN-VMYEVYGKHVSRTLGDVQLDGANPSAEEADEGTDAATESG--VDIVLNHRLVETGFADKKQFTTYLKDYMKKLVTRLEENNPSEVEVFKTNINKVMKDLLGRFKDLQFFTGESMDCEGLIAMLEYRDIDGESTPILLCFKHGLEEEK 170          
BLAST of BQ623083 vs. ExPASy Swiss-Prot
Match: TCTP_AEDAE (Translationally-controlled tumor protein homolog OS=Aedes aegypti GN=Tctp PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.605e-15
Identity = 59/161 (36.65%), Postives = 81/161 (50.31%), Query Frame = 2
Query:   95 ILSDSFPYKEIENGILWEVEGKWVVQGAVDVDI-GANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAFDKKPFVTYMKRFIKLLTPKLSEERQ---EIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYK--EGATDPTFLYMADALKEVK 559
            + SD++  K ++N +++EV GK V +   DV + GANPS                 VDIV   RL E    DKK F TY+K ++K L  +L E      E+FK NI    K LL +  DLQFF GESM  +G +    Y+  +G + P  L     L+E K
Sbjct:   13 MFSDTYKLKLVDN-VMYEVYGKHVSRTLGDVQLDGANPSAEEADEGTDNATESG--VDIVLNHRLVETGFADKKQFTTYLKDYMKKLVTRLEENNPSEVEVFKTNINKVMKDLLGRFKDLQFFTGESMDCEGLIAMLEYRDIDGESTPVLLCFKHGLEEEK 170          
BLAST of BQ623083 vs. ExPASy Swiss-Prot
Match: TCTP_PSEMX (Translationally-controlled tumor protein homolog OS=Psetta maxima GN=tpt1 PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.033e-15
Identity = 53/161 (32.92%), Postives = 78/161 (48.45%), Query Frame = 2
Query:   95 ILSDSFPYKEIENGILWEVEGKWVVQGAV--DVDIGANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAFDKKPFVTYMKRFIKLLTPKLSE---ERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYMADALKEVKC 562
            + S+ +  +E+E GIL EVEGK + +     D   GANPS                 VDI+   +L     ++KK +  Y+K+++K L  KL E   ER + F     GA K +L K  D +F+ GESM+ D  +    Y+E    P  L+  D L+  KC
Sbjct:   13 MFSNIYKIRELEGGILLEVEGKRITRTEAIDDSAFGANPSAEELSEANEAAVSSG--VDIILNHKLIST-LYNKKQYSAYIKKYMKDLKTKLEETNPERVDAFVAGAVGAVKMILGKFKDFEFYTGESMNHDAMVGLLDYREDGITPIMLFFKDGLEIEKC 170          

HSP 2 Score: 23.8682 bits (50), Expect = 2.033e-15
Identity = 8/12 (66.67%), Postives = 12/12 (100.00%), Query Frame = 1
Query:   58 MLVYQDLLTGDE 93
            M++Y+DLL+GDE
Sbjct:    1 MIIYKDLLSGDE 12          
The following BLAST results are available for this feature:
BLAST of BQ623083 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 60
Match NameE-valueIdentityDescription
TCTP_GIBZE1.307e-1836.02Translationally-controlled tumor protein homolog O... [more]
TCTP_NEUCR6.322e-1836.02Translationally-controlled tumor protein homolog O... [more]
TCTP_DANRE3.973e-1733.33Translationally-controlled tumor protein homolog O... [more]
TCTP_KLULA6.722e-1735.86Translationally-controlled tumor protein homolog O... [more]
TCTP_LABRO8.731e-1733.33Translationally-controlled tumor protein homolog O... [more]
TCTP_USTMA3.233e-1633.33Translationally-controlled tumor protein homolog O... [more]
TCTP_SCHPO7.128e-1633.33Translationally-controlled tumor protein homolog O... [more]
TCTP_AEDAL1.605e-1537.27Translationally-controlled tumor protein homolog O... [more]
TCTP_AEDAE1.605e-1536.65Translationally-controlled tumor protein homolog O... [more]
TCTP_PSEMX2.033e-1532.92Translationally-controlled tumor protein homolog O... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00174 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00174 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623083 ID=BQ623083; Name=BQ623083; organism=Citrus sinensis; type=EST; length=733bp
TCCAGTTTTCTCCGTTGATTATTTTTCTTTTTTGTGTTCGCGAGAGAGAC
TGCAATCATGTTGGTCTATCAAGATCTCCTCACCGGTGATGAGCATTCTC
TCCGATTCTTTTCCCTACAAGGAAATTGAGAATGGGATTCTGTGGGAAGT
TGAGGGAAAGTGGGTTGTACAAGGAGCCGTTGATGTTGACATTGGTGCAA
ATCCTTCTGCCGAAGGAGCTGATGAGGATGAGGGTGTTGATGACCAAGCC
GTGAAGGTGGTTGACATTGTCGACACATTCAGGCTACAGGAGCAACCCGC
TTTTGACAAGAAGCCGTTTGTAACATACATGAAGAGATTCATCAAGTTGC
TGACGCCCAAGCTGAGTGAGGAGAGGCAGGAGATATTTAAGAAGAATATT
GAGGGAGCGACCAAGTTCTTGCTCTCGAAGCTCAGTGACCTTCAATTCTT
TGTTGGGGAGAGCATGCATGATGATGGCTGTCTTGTCTTTGCTTACTACA
AGGAAGGTGCGACCGACCCAACATTTTTGTATATGGCTGATGCATTGAAG
GAGGTGAAGTGCTAAGCTGGGCTTCGAAGAAGAAGTGCCTGCTGTAGTTC
TAATTTTAATTATTGCCCGCGGTTATTTTTATGTATCTTTTGTGCTGGTT
TACTCGGGACTTGTGCTTGCTGTTTTTTAGTTTTTATTTTGACATAAACA
ATATGTTTTTCTGCTCTTAATTATTGGGTTTTA
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