BQ623083

Overview
NameBQ623083
Unique NameBQ623083
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length733
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623083 vs. ExPASy Swiss-Prot
Match: TCTP_YARLI (Translationally-controlled tumor protein homolog OS=Yarrowia lipolytica GN=YALI0E27071g PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.096e-15
Identity = 52/156 (33.33%), Postives = 81/156 (51.92%), Query Frame = 2
Query:  101 SDSFPYKEIENGILWEVEGKWVVQGAVDVDIGANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAFDKKPFVTYMKRFIKLLTPKLSE---ERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYMADALKEVK 559
            SD+F  K ++N +++EV+   +     DVDIGANPS                V ++V +FRLQ    FDKK ++TY+K ++K +   L+E   E  E F+K  +   K +++   D  F+ GESM  DG +    Y+E  T P  ++    +KE K
Sbjct:   15 SDAFEPKVVDN-VVYEVDCTMIQVAEGDVDIGANPSAEDAEEGVDSDVQT--VNNVVHSFRLQST-GFDKKSYLTYLKGYMKSIKNYLAENKPEEVENFEKGAQAYAKKIVANFKDFDFYTGESMDPDGMVALLNYREDGTTPYLIFWKHGIKEEK 166          
BLAST of BQ623083 vs. ExPASy Swiss-Prot
Match: TCTP_LATJA (Translationally-controlled tumor protein homolog OS=Lateolabrax japonicus GN=tpt1 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.737e-15
Identity = 56/161 (34.78%), Postives = 80/161 (49.69%), Query Frame = 2
Query:   95 ILSDSFPYKEIENGILWEVEGKWVVQ--GAVDVDIGANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAFDKKPFVTYMKRFIKLLTPKLSEERQE---IFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYMADALKEVKC 562
            + SD+F  KE  NGI +EV+GK   +     D  I AN S                 VDIV   +LQE  +FDKK +  Y+K ++K +  KL EE+ E    F  ++    K +L+ L + QFF GE+M+ +G +    Y+E  T P  L+  D L   KC
Sbjct:   13 MFSDAFKVKESANGIFYEVDGKITTRTDNIDDSLISANASAEETTDCTDSSVVSG--VDIVLNHKLQET-SFDKKSYKVYIKDYVKAIKQKLQEEKPERVDAFMADVAEEVKEILNNLKNYQFFTGENMNPEGMVGLLDYREDGTTPYMLFFKDGLLAEKC 170          
BLAST of BQ623083 vs. ExPASy Swiss-Prot
Match: TCTP_CANGA (Translationally-controlled tumor protein homolog OS=Candida glabrata GN=CAGL0L12870g PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 4.467e-15
Identity = 51/158 (32.28%), Postives = 80/158 (50.63%), Query Frame = 2
Query:   95 ILSDSFPYKEIENGILWEVEGKWVVQGAVDVDIGANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAFDKKPFVTYMKRFIKLLTPKLSEERQEI---FKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYMADALKEVK 559
            +LSD++   E++ G+++E +   V  G  ++DIGANPS                V ++V +FRLQ    FDKK F+TY+K ++K +  KL E+  +    F+K  +   K ++    D +FF GESM  D  +V   Y+E  T P        + E K
Sbjct:   13 LLSDAYDINEVD-GVIYEADCAMVKVGGDNIDIGANPSTEDGEDDVEDGTEV--VNNVVHSFRLQPT-GFDKKSFLTYIKGYMKAVKAKLQEKNPDAIPTFEKGAQVYVKKVIGSFKDWEFFTGESMDPDAMVVMLNYREDGTTPFVAIWKHGIDEEK 166          

HSP 2 Score: 21.557 bits (44), Expect = 4.467e-15
Identity = 6/12 (50.00%), Postives = 11/12 (91.67%), Query Frame = 1
Query:   58 MLVYQDLLTGDE 93
            M++Y+D+ +GDE
Sbjct:    1 MIIYKDIFSGDE 12          
BLAST of BQ623083 vs. ExPASy Swiss-Prot
Match: TCTP_ASPOR (Translationally-controlled tumor protein homolog OS=Aspergillus oryzae GN=AO090005000996 PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 7.530e-15
Identity = 49/161 (30.43%), Postives = 79/161 (49.07%), Query Frame = 2
Query:   95 ILSDSFPYKEIENGILWEVEGKWVVQGAVDVDI-GANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAFDKKPFVTYMKRFIKLLTPKLSEERQ-----EIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYMADALKEVK 559
            I+SD+F  KE++N ILWEV+ + +  G  ++ + GANPS               +V+DI   FRL + P  +K  +   +K ++K +  KL E++      + FK+N + A K +L+   D    VGES   D   +   Y+E    P   +    L+E K
Sbjct:   13 IISDAFNLKEVDN-ILWEVDCRNITIGDENIQLEGANPSAEGEDDDAGGAGNAEQVLDIKHNFRLNDYPKLEKDEYKKAIKGYMKKVLAKLEEKKAPEETIKEFKENAQTALKRILANYKDYDVLVGESFGADAMHILINYREDGVTPYATFWKHGLEEYK 172          

HSP 2 Score: 25.0238 bits (53), Expect = 7.530e-15
Identity = 10/21 (47.62%), Postives = 16/21 (76.19%), Query Frame = 1
Query:   58 MLVYQDLLTGDEHSLRFFSLQ 120
            M++Y+D+LTGDE     F+L+
Sbjct:    1 MIIYKDILTGDEIISDAFNLK 21          
BLAST of BQ623083 vs. ExPASy Swiss-Prot
Match: TCTP_RAT (Translationally-controlled tumor protein OS=Rattus norvegicus GN=Tpt1 PE=1 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.040e-14
Identity = 51/161 (31.68%), Postives = 81/161 (50.31%), Query Frame = 2
Query:   95 ILSDSFPYKEIENGILWEVEGKWV--VQGAVDVDIGANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAFDKKPFVTYMKRFIKLLTPKLSEERQEIFKKNIEGAT---KFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYMADALKEVKC 562
            + SD +  +EI +G+  EVEGK V   +GA+D  +    +                 VDIV    LQE  +F K+ +  Y+K ++K L  KL E++ E  K  + GA    K +L+  ++ QFF+GE+M+ DG +    Y+E    P  ++  D L+  KC
Sbjct:   13 LFSDIYKIREIADGLCLEVEGKMVSRTEGAIDDSLIGGNASAEGPEGEGTESTVVTGVDIVMNHHLQET-SFTKEAYKKYIKDYMKSLKGKLEEQKPERVKPFMTGAAEQIKHILANFNNYQFFIGENMNPDGMVALLDYREDGVTPFMIFFKDGLEMEKC 172          
BLAST of BQ623083 vs. ExPASy Swiss-Prot
Match: TCTP_MOUSE (Translationally-controlled tumor protein OS=Mus musculus GN=Tpt1 PE=1 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.040e-14
Identity = 51/161 (31.68%), Postives = 81/161 (50.31%), Query Frame = 2
Query:   95 ILSDSFPYKEIENGILWEVEGKWV--VQGAVDVDIGANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAFDKKPFVTYMKRFIKLLTPKLSEERQEIFKKNIEGAT---KFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYMADALKEVKC 562
            + SD +  +EI +G+  EVEGK V   +GA+D  +    +                 VDIV    LQE  +F K+ +  Y+K ++K L  KL E++ E  K  + GA    K +L+  ++ QFF+GE+M+ DG +    Y+E    P  ++  D L+  KC
Sbjct:   13 LFSDIYKIREIADGLCLEVEGKMVSRTEGAIDDSLIGGNASAEGPEGEGTESTVVTGVDIVMNHHLQET-SFTKEAYKKYIKDYMKSLKGKLEEQKPERVKPFMTGAAEQIKHILANFNNYQFFIGENMNPDGMVALLDYREDGVTPFMIFFKDGLEMEKC 172          
BLAST of BQ623083 vs. ExPASy Swiss-Prot
Match: TCTP_ANOGA (Translationally-controlled tumor protein homolog OS=Anopheles gambiae GN=Tctp PE=3 SV=2)

HSP 1 Score: 80.4925 bits (197), Expect = 1.040e-14
Identity = 58/161 (36.02%), Postives = 82/161 (50.93%), Query Frame = 2
Query:   95 ILSDSFPYKEIENGILWEVEGKWVVQGAVDVDI-GANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAFDKKPFVTYMKRFIKLLTPKLSEERQ---EIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYK--EGATDPTFLYMADALKEVK 559
            + SD++  K +++ +++EV GK V +   DV + GANPS                 VDIV   RL E    DKK F TY+K ++K L  +L E+     E+FK NI    K LL +  DLQFF GESM  +G +    Y+  +G + P  L     L+E K
Sbjct:   13 MFSDTYKVKLVDD-VMYEVYGKHVSRTLGDVQLDGANPSAEEAEEGTESATESG--VDIVLNHRLVETGFSDKKQFTTYLKDYMKKLVTRLEEKSPGEVEVFKTNINKVMKDLLGRFKDLQFFTGESMDCEGLIAMLEYRDIDGESVPVLLCFKHGLEEEK 170          
BLAST of BQ623083 vs. ExPASy Swiss-Prot
Match: TCTP_DROYA (Translationally-controlled tumor protein homolog OS=Drosophila yakuba GN=Tctp PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.653e-14
Identity = 53/163 (32.52%), Postives = 85/163 (52.15%), Query Frame = 2
Query:   95 ILSDSFPYKEIENGILWEVEGKWVVQGAVDVDI-GANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAF-DKKPFVTYMKRFIKLLTPKLSE---ERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKE--GATDPTFLYMADALKEVKC 562
            + +D++  K ++  +++EV GK + +   D+ + GAN S                 VD+V   RLQE  AF DKK +  Y+K ++K +  KL E   ++ ++FK N+  A K +L +  +LQFF GESM  DG +    Y+E  G + P  ++    L E KC
Sbjct:   13 MFADTYKMKLVDE-VIYEVYGKLITRQGDDIKLEGANASAEEADEGTDITSESG--VDVVLNHRLQECFAFGDKKSYTLYLKDYMKKVLAKLEEKSPDQVDVFKTNMNKAMKDILGRFKELQFFTGESMDCDGMVALVEYREINGDSVPVLMFFKHGLDEEKC 172          

HSP 2 Score: 22.3274 bits (46), Expect = 1.653e-14
Identity = 7/12 (58.33%), Postives = 11/12 (91.67%), Query Frame = 1
Query:   58 MLVYQDLLTGDE 93
            M +Y+D++TGDE
Sbjct:    1 MKIYKDIITGDE 12          
BLAST of BQ623083 vs. ExPASy Swiss-Prot
Match: TCTP_YEAST (Translationally-controlled tumor protein homolog OS=Saccharomyces cerevisiae GN=TMA19 PE=1 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.774e-14
Identity = 51/145 (35.17%), Postives = 78/145 (53.79%), Query Frame = 2
Query:   95 ILSDSFPYKEIENGILWEVEGKWVVQGAVDVDIGANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAFDKKPFVTYMKRFIKLLTPKLSEERQE---IFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDP 520
            +LSD++  K +++ +++E +   V  G  ++DIGANPS                V ++V +FRLQ Q AFDKK F+TY+K ++K +  KL E   E    F+K  +   K ++    D +FF GESM  D  +V   Y+E  T P
Sbjct:   13 LLSDAYDAKLVDD-VIYEADCAMVNVGGDNIDIGANPSAEGGDDDVEEGAEM--VNNVVHSFRLQ-QTAFDKKSFLTYIKGYMKAVKAKLQETNPEEVPKFEKGAQTYVKKVIGSFKDWEFFTGESMDPDAMVVMLNYREDGTTP 153          
BLAST of BQ623083 vs. ExPASy Swiss-Prot
Match: TCTP_PLUXY (Translationally-controlled tumor protein homolog OS=Plutella xylostella GN=Tctp PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 2.147e-14
Identity = 55/162 (33.95%), Postives = 82/162 (50.62%), Query Frame = 2
Query:   95 ILSDSFPYKEIENGILWEVEGKWVVQGAVDVDI-GANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAF-DKKPFVTYMKRFIKLLTPKLSE---ERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKE--GATDPTFLYMADALKEVK 559
            + SD++  K ++  +++EV GK V +   DV I G NPS                 VDIV   RL E  AF DKK +  Y+K ++K L  KL E   ++ ++FK N+    K +L +  +LQFF GESM  DG +    Y++  G + P  ++    L E K
Sbjct:   13 MFSDTYKMKLVDE-VIYEVTGKLVTRTHGDVQIEGFNPSAEEADEGTDAATESG--VDIVLNHRLMETYAFGDKKSYTLYLKDYMKKLVAKLEETAPDQVDVFKTNMNKVMKDILGRFKELQFFTGESMDCDGMVAMCEYRDINGVSTPVMMFFKHGLLEEK 171          

HSP 2 Score: 22.3274 bits (46), Expect = 2.147e-14
Identity = 7/12 (58.33%), Postives = 11/12 (91.67%), Query Frame = 1
Query:   58 MLVYQDLLTGDE 93
            M +Y+D++TGDE
Sbjct:    1 MRIYKDIITGDE 12          
The following BLAST results are available for this feature:
BLAST of BQ623083 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 60
Match NameE-valueIdentityDescription
TCTP_YARLI2.096e-1533.33Translationally-controlled tumor protein homolog O... [more]
TCTP_LATJA2.737e-1534.78Translationally-controlled tumor protein homolog O... [more]
TCTP_CANGA4.467e-1532.28Translationally-controlled tumor protein homolog O... [more]
TCTP_ASPOR7.530e-1530.43Translationally-controlled tumor protein homolog O... [more]
TCTP_RAT1.040e-1431.68Translationally-controlled tumor protein OS=Rattus... [more]
TCTP_MOUSE1.040e-1431.68Translationally-controlled tumor protein OS=Mus mu... [more]
TCTP_ANOGA1.040e-1436.02Translationally-controlled tumor protein homolog O... [more]
TCTP_DROYA1.653e-1432.52Translationally-controlled tumor protein homolog O... [more]
TCTP_YEAST1.774e-1435.17Translationally-controlled tumor protein homolog O... [more]
TCTP_PLUXY2.147e-1433.95Translationally-controlled tumor protein homolog O... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00174 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00174 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623083 ID=BQ623083; Name=BQ623083; organism=Citrus sinensis; type=EST; length=733bp
TCCAGTTTTCTCCGTTGATTATTTTTCTTTTTTGTGTTCGCGAGAGAGAC
TGCAATCATGTTGGTCTATCAAGATCTCCTCACCGGTGATGAGCATTCTC
TCCGATTCTTTTCCCTACAAGGAAATTGAGAATGGGATTCTGTGGGAAGT
TGAGGGAAAGTGGGTTGTACAAGGAGCCGTTGATGTTGACATTGGTGCAA
ATCCTTCTGCCGAAGGAGCTGATGAGGATGAGGGTGTTGATGACCAAGCC
GTGAAGGTGGTTGACATTGTCGACACATTCAGGCTACAGGAGCAACCCGC
TTTTGACAAGAAGCCGTTTGTAACATACATGAAGAGATTCATCAAGTTGC
TGACGCCCAAGCTGAGTGAGGAGAGGCAGGAGATATTTAAGAAGAATATT
GAGGGAGCGACCAAGTTCTTGCTCTCGAAGCTCAGTGACCTTCAATTCTT
TGTTGGGGAGAGCATGCATGATGATGGCTGTCTTGTCTTTGCTTACTACA
AGGAAGGTGCGACCGACCCAACATTTTTGTATATGGCTGATGCATTGAAG
GAGGTGAAGTGCTAAGCTGGGCTTCGAAGAAGAAGTGCCTGCTGTAGTTC
TAATTTTAATTATTGCCCGCGGTTATTTTTATGTATCTTTTGTGCTGGTT
TACTCGGGACTTGTGCTTGCTGTTTTTTAGTTTTTATTTTGACATAAACA
ATATGTTTTTCTGCTCTTAATTATTGGGTTTTA
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