BQ623087

Overview
NameBQ623087
Unique NameBQ623087
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length719
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8171 contig Csv1_Contig8171:173..891. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623087 vs. ExPASy Swiss-Prot
Match: VATA_DEIDV (V-type ATP synthase alpha chain OS=Deinococcus deserti (strain VCD115 / DSM 17065 / LMG 22923) GN=atpA PE=3 SV=1)

HSP 1 Score: 281.567 bits (719), Expect = 2.956e-75
Identity = 139/239 (58.16%), Postives = 179/239 (74.90%), Query Frame = 2
Query:    2 VMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQ-FDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMR 715
            +M RT L+ANTSNMPVAAREAS+YTGIT+AEYFRD GY+VS+MADSTSRWAEALREIS RL EMPA+ GYP YL A+LA+FYERAG VK L G +  G+V+++GAVSP GGD S+PVT ATL I   FW LD  LA+R+HFP++NW  SYS ++  L+ +Y Q   PDF  +R +   +LQ+E  L E+VQLVG DAL + +++ +ET ++LR+D+L QN F P D      K+  +M+
Sbjct:  284 LMHRTILIANTSNMPVAAREASVYTGITLAEYFRDQGYSVSLMADSTSRWAEALREISSRLEEMPAEEGYPPYLGAKLAAFYERAGAVKTLSGDD--GAVSVIGAVSPAGGDMSEPVTQATLRITGAFWRLDAGLARRRHFPAINWNGSYSLFTPILDKWYRQNVGPDFPELRQRITNLLQQEAALQEVVQLVGPDALQDNERLIIETGRMLRQDFLQQNGFDPVDASASMPKNYGLMK 520          
BLAST of BQ623087 vs. ExPASy Swiss-Prot
Match: VATA_DEIRA (V-type ATP synthase alpha chain OS=Deinococcus radiodurans GN=atpA PE=3 SV=1)

HSP 1 Score: 280.796 bits (717), Expect = 5.042e-75
Identity = 138/239 (57.74%), Postives = 179/239 (74.90%), Query Frame = 2
Query:    2 VMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFY-EQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMR 715
            +M RT L+ANTSNMPVAAREAS+YTG+T+AEYFRD GY+VS+MADSTSRWAEALREIS RL EMPA+ GYP YL A+LA+FYERAG VK L G +  G+V+++GAVSP GGD S+PVT ATL I   FW LD  LA+R+HFP++NW  SYS ++  L+ +Y E   PDF  +R +   +LQ+E  L E+VQLVG DAL + +++ +ET ++LR+D+L QN F P D      K+  +M+
Sbjct:  284 LMHRTILIANTSNMPVAAREASVYTGVTLAEYFRDQGYSVSLMADSTSRWAEALREISSRLEEMPAEEGYPPYLGAKLAAFYERAGAVKTLAGED--GAVSVIGAVSPAGGDMSEPVTQATLRITGAFWRLDAGLARRRHFPAINWNGSYSLFTPILDKWYRENVGPDFPELRQRIGSLLQQEAALQEVVQLVGPDALQDNERLIIETGRMLRQDFLQQNGFDPVDASASMPKNYGLMK 520          
BLAST of BQ623087 vs. ExPASy Swiss-Prot
Match: VATA_HALSA (V-type ATP synthase alpha chain OS=Halobacterium salinarium GN=atpA PE=1 SV=1)

HSP 1 Score: 280.411 bits (716), Expect = 6.585e-75
Identity = 140/230 (60.87%), Postives = 174/230 (75.65%), Query Frame = 2
Query:    2 VMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALES-FYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCP 688
            +M RTTL+ANTSNMPVAARE+ IYTGITIAEY+RDMGY+V++MADSTSRWAEA+REIS RL EMP + GYPAYLAARL+ FYERAG  +   G E  GS++++GAVSPPGGDFS+PVT  TL IV+ FW LD  LA+R+HFP++NW  SYS Y   L+  F +    D+   R  A ++L  E +L EIVQLVGKDAL E  ++TLE A+ +RE +L QNA    D++CP
Sbjct:  288 LMARTTLIANTSNMPVAARESCIYTGITIAEYYRDMGYDVALMADSTSRWAEAMREISSRLEEMPGEEGYPAYLAARLSEFYERAGYFENFNGTE--GSISVIGAVSPPGGDFSEPVTQNTLRIVKTFWALDSDLAERRHFPAINWDESYSLYKDQLDPWFTDNVVDDWAEQRQWAVDILDEESELEEIVQLVGKDALPEDQQLTLEVARYIREAWLQQNALHDVDRYCP 515          
BLAST of BQ623087 vs. ExPASy Swiss-Prot
Match: VATA_HALS3 (V-type ATP synthase alpha chain OS=Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1) GN=atpA PE=3 SV=1)

HSP 1 Score: 280.411 bits (716), Expect = 6.585e-75
Identity = 140/230 (60.87%), Postives = 174/230 (75.65%), Query Frame = 2
Query:    2 VMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALES-FYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCP 688
            +M RTTL+ANTSNMPVAARE+ IYTGITIAEY+RDMGY+V++MADSTSRWAEA+REIS RL EMP + GYPAYLAARL+ FYERAG  +   G E  GS++++GAVSPPGGDFS+PVT  TL IV+ FW LD  LA+R+HFP++NW  SYS Y   L+  F +    D+   R  A ++L  E +L EIVQLVGKDAL E  ++TLE A+ +RE +L QNA    D++CP
Sbjct:  288 LMARTTLIANTSNMPVAARESCIYTGITIAEYYRDMGYDVALMADSTSRWAEAMREISSRLEEMPGEEGYPAYLAARLSEFYERAGYFENFNGTE--GSISVIGAVSPPGGDFSEPVTQNTLRIVKTFWALDSDLAERRHFPAINWDESYSLYKDQLDPWFTDNVVDDWAEQRQWAVDILDEESELEEIVQLVGKDALPEDQQLTLEVARYIREAWLQQNALHDVDRYCP 515          
BLAST of BQ623087 vs. ExPASy Swiss-Prot
Match: VATA_DEIGD (V-type ATP synthase alpha chain OS=Deinococcus geothermalis (strain DSM 11300) GN=atpA PE=3 SV=1)

HSP 1 Score: 280.026 bits (715), Expect = 8.600e-75
Identity = 139/239 (58.16%), Postives = 179/239 (74.90%), Query Frame = 2
Query:    2 VMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFY-EQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMR 715
            +M RT L+ANTSNMPVAAREAS+YTGIT+AEYFRD GY+VS+MADSTSRWAEALREIS RL EMPA+ GYP YL A+LA+FYERAG VK L G +  G+V+++GAVSP GGD S+PVT ATL I   FW LD  LA+R+HFP++NW  SYS ++  L+S+Y E    DF  +R +   +LQ+E  L E+VQLVG DAL + +++ +ET ++LR+D+L QN F P D      K+  +M+
Sbjct:  284 LMHRTILIANTSNMPVAAREASVYTGITLAEYFRDQGYSVSLMADSTSRWAEALREISSRLEEMPAEEGYPPYLGAKLAAFYERAGAVKTLAGED--GAVSVIGAVSPAGGDMSEPVTQATLRITGAFWRLDAGLARRRHFPAINWNGSYSLFTPILDSWYRENVGRDFPELRQRISNLLQQEASLQEVVQLVGPDALQDQERLVIETGRMLRQDFLQQNGFDPVDASASMPKNYGLMK 520          
BLAST of BQ623087 vs. ExPASy Swiss-Prot
Match: VATA_HALMA (V-type ATP synthase alpha chain OS=Haloarcula marismortui GN=atpA PE=3 SV=1)

HSP 1 Score: 279.641 bits (714), Expect = 1.123e-74
Identity = 144/238 (60.50%), Postives = 177/238 (74.37%), Query Frame = 2
Query:    2 VMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYE-QFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMM 712
            +M RT L+ANTSNMPVAARE+ +YTGITIAEYFRDMGY+V++MADSTSRWAEA+REIS RL EMP + GYPAYL+ARL+ FYERAG  + + G E  GSV+++GAVSPPGGDFS+PVT  TL IV+ FW LD  LA+R+HFPS+NW  SYS Y   L+ ++E     D+   R  A + L  E +L EIVQLVGKDAL E  ++TLE A+ LRE +L QNAF   D FC   K+  +M
Sbjct:  291 LMDRTCLIANTSNMPVAARESCVYTGITIAEYFRDMGYDVALMADSTSRWAEAMREISSRLEEMPGEEGYPAYLSARLSEFYERAGYFENINGTE--GSVSVIGAVSPPGGDFSEPVTQNTLRIVKTFWALDADLAERRHFPSINWNESYSLYRDQLDPWFEDNVRADWPETRQWAIDTLDEEAELQEIVQLVGKDALPEDQQLTLEIARYLREAWLQQNAFHDVDTFCEPEKTYRIM 526          
BLAST of BQ623087 vs. ExPASy Swiss-Prot
Match: VATA_METS5 (V-type ATP synthase alpha chain OS=Metallosphaera sedula (strain ATCC 51363 / DSM 5348) GN=atpA PE=3 SV=1)

HSP 1 Score: 277.715 bits (709), Expect = 4.268e-74
Identity = 133/239 (55.65%), Postives = 181/239 (75.73%), Query Frame = 2
Query:    2 VMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFY-EQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMR 715
            +++RT +VANTSNMPVAAREASIY G+T+AEYFRD GY+V  +ADSTSRWAEALR++ GR+ EMPA+ G+P+YL++R+A +YERAG+V+ LG PER GSVT+  AVSPPGGDF++PVTS TL  V+VFW LD  LAQ +H+P++NWL  +S Y   +  ++ +  DPD+  +R      L RED+L +IV+LVG ++LAE DK+TLE A+L++E +L QNA+   D F    K   +M+
Sbjct:  286 LLERTVMVANTSNMPVAAREASIYVGVTLAEYFRDQGYDVLTVADSTSRWAEALRDLGGRMEEMPAEEGFPSYLSSRIAEYYERAGRVRTLGNPERYGSVTLASAVSPPGGDFTEPVTSTTLRFVRVFWPLDVSLAQARHYPAINWLQGFSSYVDLVSDWWIKNVDPDWRIMRDFMVRTLLREDELKQIVRLVGPESLAEKDKLTLEVARLIKEAFLKQNAYDDIDAFSSPQKQARIMK 524          
BLAST of BQ623087 vs. ExPASy Swiss-Prot
Match: VATA_SULTO (V-type ATP synthase alpha chain OS=Sulfolobus tokodaii GN=atpA PE=1 SV=3)

HSP 1 Score: 276.944 bits (707), Expect = 7.281e-74
Identity = 135/239 (56.49%), Postives = 181/239 (75.73%), Query Frame = 2
Query:    2 VMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKY-STALESFYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMR 715
            ++ RT LVANTSNMPVAARE+SIY G+T+AEYFRD GY+V ++ADSTSRWAEALR++ GR+ EMPA+ G+P+YL +RLA +YERAG+V  LG PER GSVTI  AVSPPGGDF++PVTS TL  V+VFW LD  LAQ +H+P++NW+  +S Y     + +++  DP++  +R    +VL RED+L +IV+LVG ++LAE DK+ LE AKL+++ +L QNA+   D F    K V +MR
Sbjct:  287 LLLRTILVANTSNMPVAARESSIYVGVTMAEYFRDQGYDVLLVADSTSRWAEALRDLGGRMEEMPAEEGFPSYLPSRLAEYYERAGRVIALGNPERYGSVTIASAVSPPGGDFTEPVTSNTLRFVRVFWPLDVSLAQARHYPAINWIQGFSAYVDLVAQWWHKNVDPNWKEMRDTMMKVLIREDELRQIVRLVGPESLAEKDKLVLEAAKLIKDAFLKQNAYDDIDAFSSPQKQVRIMR 525          
BLAST of BQ623087 vs. ExPASy Swiss-Prot
Match: VATA_SULSO (V-type ATP synthase alpha chain OS=Sulfolobus solfataricus GN=atpA PE=3 SV=1)

HSP 1 Score: 276.944 bits (707), Expect = 7.281e-74
Identity = 135/239 (56.49%), Postives = 179/239 (74.90%), Query Frame = 2
Query:    2 VMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYE-QFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMR 715
            +++RT LVANTSNMPVAAREASIY GIT+AEYFRD GY+  ++ADSTSRWAEALR++ GR+ EMPA+ G+P+YL +RLA +YERAG+VK +G PER GSVT+  AVSPPGGDF++PVTS TL  V+VFW LD  LAQ +H+P++NWL  +S Y   + +++    DP +  +R      L RED+L +IV+LVG ++LAE DK+ LETA+L++E +L QNA+   D F    K   +MR
Sbjct:  286 LLERTILVANTSNMPVAAREASIYVGITMAEYFRDQGYDTLLVADSTSRWAEALRDLGGRMEEMPAEEGFPSYLPSRLAEYYERAGRVKTIGNPERFGSVTVASAVSPPGGDFTEPVTSQTLRFVKVFWPLDVSLAQARHYPAINWLQGFSAYVDLVANWWNTNVDPKWREMRDMMVRTLIREDELRQIVRLVGPESLAEKDKLILETARLIKEAFLKQNAYDDIDAFSSPQKQARIMR 524          
BLAST of BQ623087 vs. ExPASy Swiss-Prot
Match: VATA_SULIY (V-type ATP synthase alpha chain OS=Sulfolobus islandicus (strain Y.G.57.14 / Yellowstone #1) GN=atpA PE=3 SV=1)

HSP 1 Score: 276.174 bits (705), Expect = 1.242e-73
Identity = 135/239 (56.49%), Postives = 179/239 (74.90%), Query Frame = 2
Query:    2 VMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYE-QFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMR 715
            +++RT LVANTSNMPVAAREASIY GIT+AEYFRD GY+  ++ADSTSRWAEALR++ GR+ EMPA+ G+P+YL +RLA +YERAG+VK +G PER GSVT+  AVSPPGGDF++PVTS TL  V+VFW LD  LAQ +H+P++NWL  +S Y   + +++    DP +  +R      L RED+L +IV+LVG ++LAE DK+ LETA+L++E +L QNA+   D F    K   +MR
Sbjct:  286 LLERTILVANTSNMPVAAREASIYVGITMAEYFRDQGYDTLLVADSTSRWAEALRDLGGRMEEMPAEEGFPSYLPSRLAEYYERAGRVKTVGKPERFGSVTVASAVSPPGGDFTEPVTSQTLRFVKVFWPLDVSLAQARHYPAINWLQGFSAYVDLVANWWNTNVDPKWREMRDMMVRTLIREDELRQIVRLVGPESLAEKDKLVLETARLIKEAFLKQNAYDDIDAFSSPQKQARVMR 524          
The following BLAST results are available for this feature:
BLAST of BQ623087 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
VATA_DEIDV2.956e-7558.16V-type ATP synthase alpha chain OS=Deinococcus des... [more]
VATA_DEIRA5.042e-7557.74V-type ATP synthase alpha chain OS=Deinococcus rad... [more]
VATA_HALSA6.585e-7560.87V-type ATP synthase alpha chain OS=Halobacterium s... [more]
VATA_HALS36.585e-7560.87V-type ATP synthase alpha chain OS=Halobacterium s... [more]
VATA_DEIGD8.600e-7558.16V-type ATP synthase alpha chain OS=Deinococcus geo... [more]
VATA_HALMA1.123e-7460.50V-type ATP synthase alpha chain OS=Haloarcula mari... [more]
VATA_METS54.268e-7455.65V-type ATP synthase alpha chain OS=Metallosphaera ... [more]
VATA_SULTO7.281e-7456.49V-type ATP synthase alpha chain OS=Sulfolobus toko... [more]
VATA_SULSO7.281e-7456.49V-type ATP synthase alpha chain OS=Sulfolobus solf... [more]
VATA_SULIY1.242e-7356.49V-type ATP synthase alpha chain OS=Sulfolobus isla... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00178 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00178 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623087 ID=BQ623087; Name=BQ623087; organism=Citrus sinensis; type=EST; length=719bp
TGTCATGAAGCGTACAACACTTGTGGCCAACACTTCTAACATGCCTGTGG
CTGCTCGTGAGGCTTCGATTTATACAGGAATCACCATAGCTGAATATTTC
AGAGATATGGGGTACAATGTTAGCATGATGGCAGATTCAACTTCTCGTTG
GGCAGAAGCGTTGCGTGAAATTTCAGGACGGCTGGCAGAAATGCCTGCAG
ATAGTGGATATCCTGCTTACCTGGCTGCACGTTTGGCCTCATTTTATGAA
CGTGCTGGGAAAGTTAAATGTCTTGGTGGACCAGAACGTACTGGTAGTGT
CACAATTGTTGGTGCAGTTTCTCCTCCTGGAGGAGATTTCTCAGATCCTG
TAACATCTGCCACCCTCAGCATTGTGCAGGTCTTCTGGGGTCTGGATAAG
AAACTTGCGCAGAGAAAGCATTTTCCTTCTGTAAACTGGCTTATTTCTTA
CTCGAAGTATTCAACAGCATTAGAGTCTTTCTATGAGCAATTTGATCCGG
ATTTTATTAACATCAGGACAAAGGCTAGAGAGGTGCTGCAGAGAGAAGAT
GACCTGAATGAAATTGTGCAACTTGTCGGAAAGGATGCTTTGGCTGAAGG
AGATAAGATTACGCTAGAGACTGCTAAGCTTTTGAGGGAGGACTATCTTG
CTCAAAACGCATTTACTCCATATGACAAGTTCTGCCCTTTCTACAAGTCT
GTTTGGATGATGCGTACAT
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