BQ623087

Overview
NameBQ623087
Unique NameBQ623087
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length719
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8171 contig Csv1_Contig8171:173..891. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623087 vs. ExPASy Swiss-Prot
Match: VATA_SULIN (V-type ATP synthase alpha chain OS=Sulfolobus islandicus (strain Y.N.15.51 / Yellowstone #2) GN=atpA PE=3 SV=1)

HSP 1 Score: 276.174 bits (705), Expect = 1.242e-73
Identity = 135/239 (56.49%), Postives = 179/239 (74.90%), Query Frame = 2
Query:    2 VMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYE-QFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMR 715
            +++RT LVANTSNMPVAAREASIY GIT+AEYFRD GY+  ++ADSTSRWAEALR++ GR+ EMPA+ G+P+YL +RLA +YERAG+VK +G PER GSVT+  AVSPPGGDF++PVTS TL  V+VFW LD  LAQ +H+P++NWL  +S Y   + +++    DP +  +R      L RED+L +IV+LVG ++LAE DK+ LETA+L++E +L QNA+   D F    K   +MR
Sbjct:  286 LLERTILVANTSNMPVAAREASIYVGITMAEYFRDQGYDTLLVADSTSRWAEALRDLGGRMEEMPAEEGFPSYLPSRLAEYYERAGRVKTVGKPERFGSVTVASAVSPPGGDFTEPVTSQTLRFVKVFWPLDVSLAQARHYPAINWLQGFSAYVDLVANWWNTNVDPKWREMRDMMVRTLIREDELRQIVRLVGPESLAEKDKLVLETARLIKEAFLKQNAYDDIDAFSSPQKQARVMR 524          
BLAST of BQ623087 vs. ExPASy Swiss-Prot
Match: VATA_SULIM (V-type ATP synthase alpha chain OS=Sulfolobus islandicus (strain M.14.25 / Kamchatka #1) GN=atpA PE=3 SV=1)

HSP 1 Score: 276.174 bits (705), Expect = 1.242e-73
Identity = 135/239 (56.49%), Postives = 179/239 (74.90%), Query Frame = 2
Query:    2 VMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYE-QFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMR 715
            +++RT LVANTSNMPVAAREASIY GIT+AEYFRD GY+  ++ADSTSRWAEALR++ GR+ EMPA+ G+P+YL +RLA +YERAG+VK +G PER GSVT+  AVSPPGGDF++PVTS TL  V+VFW LD  LAQ +H+P++NWL  +S Y   + +++    DP +  +R      L RED+L +IV+LVG ++LAE DK+ LETA+L++E +L QNA+   D F    K   +MR
Sbjct:  286 LLERTILVANTSNMPVAAREASIYVGITMAEYFRDQGYDTLLVADSTSRWAEALRDLGGRMEEMPAEEGFPSYLPSRLAEYYERAGRVKTVGKPERFGSVTVASAVSPPGGDFTEPVTSQTLRFVKVFWPLDVSLAQARHYPAINWLQGFSAYVDLVANWWNTNVDPKWREMRDMMVRTLIREDELRQIVRLVGPESLAEKDKLVLETARLIKEAFLKQNAYDDIDAFSSPQKQARVMR 524          
BLAST of BQ623087 vs. ExPASy Swiss-Prot
Match: VATA_SULIL (V-type ATP synthase alpha chain OS=Sulfolobus islandicus (strain L.S.2.15 / Lassen #1) GN=atpA PE=3 SV=1)

HSP 1 Score: 276.174 bits (705), Expect = 1.242e-73
Identity = 135/239 (56.49%), Postives = 179/239 (74.90%), Query Frame = 2
Query:    2 VMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYE-QFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMR 715
            +++RT LVANTSNMPVAAREASIY GIT+AEYFRD GY+  ++ADSTSRWAEALR++ GR+ EMPA+ G+P+YL +RLA +YERAG+VK +G PER GSVT+  AVSPPGGDF++PVTS TL  V+VFW LD  LAQ +H+P++NWL  +S Y   + +++    DP +  +R      L RED+L +IV+LVG ++LAE DK+ LETA+L++E +L QNA+   D F    K   +MR
Sbjct:  286 LLERTILVANTSNMPVAAREASIYVGITMAEYFRDQGYDTLLVADSTSRWAEALRDLGGRMEEMPAEEGFPSYLPSRLAEYYERAGRVKTVGKPERFGSVTVASAVSPPGGDFTEPVTSQTLRFVKVFWPLDVSLAQARHYPAINWLQGFSAYVDLVANWWNTNVDPKWREMRDMMVRTLIREDELRQIVRLVGPESLAEKDKLVLETARLIKEAFLKQNAYDDIDAFSSPQKQARVMR 524          
BLAST of BQ623087 vs. ExPASy Swiss-Prot
Match: VATA_SULIK (V-type ATP synthase alpha chain OS=Sulfolobus islandicus (strain M.16.4 / Kamchatka #3) GN=atpA PE=3 SV=1)

HSP 1 Score: 276.174 bits (705), Expect = 1.242e-73
Identity = 135/239 (56.49%), Postives = 179/239 (74.90%), Query Frame = 2
Query:    2 VMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYE-QFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMR 715
            +++RT LVANTSNMPVAAREASIY GIT+AEYFRD GY+  ++ADSTSRWAEALR++ GR+ EMPA+ G+P+YL +RLA +YERAG+VK +G PER GSVT+  AVSPPGGDF++PVTS TL  V+VFW LD  LAQ +H+P++NWL  +S Y   + +++    DP +  +R      L RED+L +IV+LVG ++LAE DK+ LETA+L++E +L QNA+   D F    K   +MR
Sbjct:  286 LLERTILVANTSNMPVAAREASIYVGITMAEYFRDQGYDTLLVADSTSRWAEALRDLGGRMEEMPAEEGFPSYLPSRLAEYYERAGRVKTVGKPERFGSVTVASAVSPPGGDFTEPVTSQTLRFVKVFWPLDVSLAQARHYPAINWLQGFSAYVDLVANWWNTNVDPKWREMRDMMVRTLIREDELRQIVRLVGPESLAEKDKLVLETARLIKEAFLKQNAYDDIDAFSSPQKQARVMR 524          
BLAST of BQ623087 vs. ExPASy Swiss-Prot
Match: VATA_SULIA (V-type ATP synthase alpha chain OS=Sulfolobus islandicus (strain M.16.27) GN=atpA PE=3 SV=1)

HSP 1 Score: 276.174 bits (705), Expect = 1.242e-73
Identity = 135/239 (56.49%), Postives = 179/239 (74.90%), Query Frame = 2
Query:    2 VMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYE-QFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMR 715
            +++RT LVANTSNMPVAAREASIY GIT+AEYFRD GY+  ++ADSTSRWAEALR++ GR+ EMPA+ G+P+YL +RLA +YERAG+VK +G PER GSVT+  AVSPPGGDF++PVTS TL  V+VFW LD  LAQ +H+P++NWL  +S Y   + +++    DP +  +R      L RED+L +IV+LVG ++LAE DK+ LETA+L++E +L QNA+   D F    K   +MR
Sbjct:  286 LLERTILVANTSNMPVAAREASIYVGITMAEYFRDQGYDTLLVADSTSRWAEALRDLGGRMEEMPAEEGFPSYLPSRLAEYYERAGRVKTVGKPERFGSVTVASAVSPPGGDFTEPVTSQTLRFVKVFWPLDVSLAQARHYPAINWLQGFSAYVDLVANWWNTNVDPKWREMRDMMVRTLIREDELRQIVRLVGPESLAEKDKLVLETARLIKEAFLKQNAYDDIDAFSSPQKQARVMR 524          
BLAST of BQ623087 vs. ExPASy Swiss-Prot
Match: VATA_SULAC (V-type ATP synthase alpha chain OS=Sulfolobus acidocaldarius GN=atpA PE=3 SV=1)

HSP 1 Score: 275.018 bits (702), Expect = 2.767e-73
Identity = 133/239 (55.65%), Postives = 182/239 (76.15%), Query Frame = 2
Query:    2 VMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALES-FYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMR 715
            +++RT LVANTSNMPVAARE+SIY G+T+AEYFRD GY+V ++ADSTSRWAEALRE+ GR+ EMPA+ G+P+YL +RLA +YERAG+V  LG PER GSV+I  AVSPPGGDF++PVTS TL  V+VFW LD  LAQ +H+P++NW+  +S Y   + S +++  DP +  +R+   ++L RED+L +IV+LVG ++L++ DK+ LE +KL+R+ +L QNAF   D F    K   +MR
Sbjct:  287 LLQRTILVANTSNMPVAARESSIYVGVTMAEYFRDQGYDVLLVADSTSRWAEALRELGGRMEEMPAEEGFPSYLPSRLAEYYERAGRVIALGKPERFGSVSIASAVSPPGGDFTEPVTSNTLRFVRVFWPLDVSLAQARHYPAINWIQGFSAYVDLVASWWHKNVDPTWFEMRSVLVKILLREDELRQIVRLVGPESLSDKDKLILEASKLIRDAFLKQNAFDDIDAFSSPQKQAKIMR 525          
BLAST of BQ623087 vs. ExPASy Swiss-Prot
Match: VATA2_CLOTE (V-type ATP synthase alpha chain 2 OS=Clostridium tetani GN=atpA2 PE=3 SV=1)

HSP 1 Score: 272.707 bits (696), Expect = 1.373e-72
Identity = 138/239 (57.74%), Postives = 176/239 (73.64%), Query Frame = 2
Query:    2 VMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFY-EQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMR 715
            +M RT L+ANTSNMPVAAREASIYTGITIAEY+RDMGY+V++MADSTSRWAEALREISGRL EMPA+ GYPAYL +R+A FYERAG V+ L   E  GSVT++GAVSP G DFS+PVT  T   V  F GLD+KLA  +H+P++NWL SYS+Y+  L  +Y E    D I +R K  ++L  E+ L EIV+LVG+D L +  ++ LE A++L+  +L QNA+   D + P  K   M++
Sbjct:  290 LMNRTVLIANTSNMPVAAREASIYTGITIAEYYRDMGYDVAIMADSTSRWAEALREISGRLEEMPAEEGYPAYLPSRIAEFYERAGYVENLNDTE--GSVTVIGAVSPAGADFSEPVTQNTKRFVGAFLGLDRKLAYARHYPAINWLTSYSQYNVMLTDWYLENISEDIIELRNKMLKILFEENKLQEIVKLVGEDVLPDDQRLILEVARILKVGFLQQNAYHDEDTYVPKEKQYKMLK 526          
BLAST of BQ623087 vs. ExPASy Swiss-Prot
Match: VATA_NANEQ (V-type ATP synthase alpha chain OS=Nanoarchaeum equitans GN=atpA PE=3 SV=1)

HSP 1 Score: 266.544 bits (680), Expect = 9.840e-71
Identity = 130/238 (54.62%), Postives = 176/238 (73.95%), Query Frame = 2
Query:    2 VMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMR 715
            +M RT L+ANTSNMP+AAREASIY G TI EYFRD GY+V + ADSTSRWAEALREIS RL E+P++ GYPAYL  +LA FYER+G+V+ L   E  GS+TI+GAVSPPGGDFS+PVT  TL +V   W LD KLA ++H+P++N+LISY+K    ++ ++E+   D I IR +   +L+RE +L +IV +VG DAL++ +KI L   +++RE +L Q+AF   D + P  K++ +MR
Sbjct:  276 LMYRTILIANTSNMPIAAREASIYLGATIGEYFRDQGYSVVVNADSTSRWAEALREISSRLGEIPSEEGYPAYLLRKLAEFYERSGRVRTLNDLE--GSLTIIGAVSPPGGDFSEPVTQNTLRLVGALWALDSKLAYKRHYPAINYLISYTKQWEFVKKYFEELYEDVIEIREEFFAILKRESELMDIVSIVGPDALSDNEKIYLHMGRIIREGFLQQDAFDENDSYSPLEKTIELMR 511          
BLAST of BQ623087 vs. ExPASy Swiss-Prot
Match: VATA_THEPD (V-type ATP synthase alpha chain OS=Thermofilum pendens (strain Hrk 5) GN=atpA PE=3 SV=1)

HSP 1 Score: 263.077 bits (671), Expect = 1.088e-69
Identity = 121/239 (50.63%), Postives = 176/239 (73.64%), Query Frame = 2
Query:    2 VMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFY-EQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMR 715
            +++R+ ++ANTSNMPV+AREASIY G+TIAEY+RD GY+V+++ADSTSRWAEALREI+GRL E+P + GYPAYL  ++A FYER G+VK LG PER+GSVT++GAVSPPGGD+++PVT  TL  V   W LD  LA R+HFP++NWL S+S+Y+  +E ++ +   P+F   R +A  +L    ++  I  +VG+ AL +  ++ L T+++++E +L Q A +  D FC   K  W+++
Sbjct:  288 IIERSIIIANTSNMPVSAREASIYMGVTIAEYYRDQGYDVTLIADSTSRWAEALREIAGRLGELPVERGYPAYLPDKIAEFYERGGRVKALGSPERSGSVTVLGAVSPPGGDYNEPVTIHTLRFVGTMWALDTDLAYRRHFPAINWLKSFSQYADIIERWWVKNVSPEFPKYRRRALRLLTVASEIEAIASVVGEGALPDDQRLILLTSEIIKEGFLRQTALSGEDVFCKPEKQYWLLK 526          
BLAST of BQ623087 vs. ExPASy Swiss-Prot
Match: VATA_ANADF (V-type ATP synthase alpha chain OS=Anaeromyxobacter sp. (strain Fw109-5) GN=atpA PE=3 SV=1)

HSP 1 Score: 262.307 bits (669), Expect = 1.856e-69
Identity = 134/239 (56.07%), Postives = 176/239 (73.64%), Query Frame = 2
Query:    2 VMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYE-QFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMR 715
            ++ RT LV NTSNMPVAAREASIYTG TIAEYFRDMG +V++M DSTSRWAEALREIS RL EMP + GYP YLA+RLA FYERAG+V+ LG  E  G+VTIVGAVSPPGGD S+PVT  +L      W L   LA R+H+P+V+W IS+S  +  L  ++E +    F  +R +A ++LQRE +L E+ +LVG ++L + +++ LE+A+LLRE +L Q+A+ P D  CP  K++ M+R
Sbjct:  279 LLGRTVLVVNTSNMPVAAREASIYTGCTIAEYFRDMGRSVALMIDSTSRWAEALREISARLEEMPGEEGYPTYLASRLARFYERAGRVETLGCGE--GAVTIVGAVSPPGGDLSEPVTQCSLRATGALWALSADLAHRRHYPAVDWAISFSLEAERLRGWFEREAGEGFGALRDEAMKLLQRERELVEVAELVGTESLQDAERLVLESARLLREGFLRQSAYDPVDASCPPRKALEMLR 515          
The following BLAST results are available for this feature:
BLAST of BQ623087 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
VATA_SULIN1.242e-7356.49V-type ATP synthase alpha chain OS=Sulfolobus isla... [more]
VATA_SULIM1.242e-7356.49V-type ATP synthase alpha chain OS=Sulfolobus isla... [more]
VATA_SULIL1.242e-7356.49V-type ATP synthase alpha chain OS=Sulfolobus isla... [more]
VATA_SULIK1.242e-7356.49V-type ATP synthase alpha chain OS=Sulfolobus isla... [more]
VATA_SULIA1.242e-7356.49V-type ATP synthase alpha chain OS=Sulfolobus isla... [more]
VATA_SULAC2.767e-7355.65V-type ATP synthase alpha chain OS=Sulfolobus acid... [more]
VATA2_CLOTE1.373e-7257.74V-type ATP synthase alpha chain 2 OS=Clostridium t... [more]
VATA_NANEQ9.840e-7154.62V-type ATP synthase alpha chain OS=Nanoarchaeum eq... [more]
VATA_THEPD1.088e-6950.63V-type ATP synthase alpha chain OS=Thermofilum pen... [more]
VATA_ANADF1.856e-6956.07V-type ATP synthase alpha chain OS=Anaeromyxobacte... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00178 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00178 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623087 ID=BQ623087; Name=BQ623087; organism=Citrus sinensis; type=EST; length=719bp
TGTCATGAAGCGTACAACACTTGTGGCCAACACTTCTAACATGCCTGTGG
CTGCTCGTGAGGCTTCGATTTATACAGGAATCACCATAGCTGAATATTTC
AGAGATATGGGGTACAATGTTAGCATGATGGCAGATTCAACTTCTCGTTG
GGCAGAAGCGTTGCGTGAAATTTCAGGACGGCTGGCAGAAATGCCTGCAG
ATAGTGGATATCCTGCTTACCTGGCTGCACGTTTGGCCTCATTTTATGAA
CGTGCTGGGAAAGTTAAATGTCTTGGTGGACCAGAACGTACTGGTAGTGT
CACAATTGTTGGTGCAGTTTCTCCTCCTGGAGGAGATTTCTCAGATCCTG
TAACATCTGCCACCCTCAGCATTGTGCAGGTCTTCTGGGGTCTGGATAAG
AAACTTGCGCAGAGAAAGCATTTTCCTTCTGTAAACTGGCTTATTTCTTA
CTCGAAGTATTCAACAGCATTAGAGTCTTTCTATGAGCAATTTGATCCGG
ATTTTATTAACATCAGGACAAAGGCTAGAGAGGTGCTGCAGAGAGAAGAT
GACCTGAATGAAATTGTGCAACTTGTCGGAAAGGATGCTTTGGCTGAAGG
AGATAAGATTACGCTAGAGACTGCTAAGCTTTTGAGGGAGGACTATCTTG
CTCAAAACGCATTTACTCCATATGACAAGTTCTGCCCTTTCTACAAGTCT
GTTTGGATGATGCGTACAT
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