BQ623087

Overview
NameBQ623087
Unique NameBQ623087
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length719
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623087 vs. ExPASy Swiss-Prot
Match: VATA_BORDL (V-type ATP synthase alpha chain OS=Borrelia duttonii (strain Ly) GN=atpA PE=3 SV=1)

HSP 1 Score: 200.675 bits (509), Expect = 6.631e-51
Identity = 107/236 (45.34%), Postives = 157/236 (66.53%), Query Frame = 2
Query:    2 VMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWM 709
            +M+RT ++ NTS+MPVAAREAS+YT ITI EY+R MG ++ ++ADSTSRWA+A+RE+SGRL E+P D  +PAYL + +ASFYERAG V    G    GSVT+ G+VSP GG+F +PVT ATL +V  F GL ++ +  + FP++N L S+SKY   +E  YE  +         AR  L + +++N+++++VG+D ++  D +    ++LL   YL QN+F   D    F +  +M
Sbjct:  291 LMERTCIICNTSSMPVAAREASVYTAITIGEYYRQMGLDILLLADSTSRWAQAMREMSGRLEEIPGDEAFPAYLESVIASFYERAGVVVLNNG--SVGSVTVGGSVSPAGGNFEEPVTQATLKVVGAFHGLTRERSDARKFPAINPLDSWSKYRGVVE--YEATE--------YARAFLVKGNEVNQMMRVVGEDGVSIDDFVVYLKSELLDSCYLQQNSFDSVDAAVSFERQNYM 514          
BLAST of BQ623087 vs. ExPASy Swiss-Prot
Match: VATA_BORHD (V-type ATP synthase alpha chain OS=Borrelia hermsii (strain DAH) GN=atpA PE=3 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 1.477e-50
Identity = 102/225 (45.33%), Postives = 154/225 (68.44%), Query Frame = 2
Query:    2 VMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYD 676
            +M+RT ++ NTS+MPVAAREAS+YT ITI EY+R MG ++ ++ADSTSRWA+A+RE+SGRL E+P +  +PAYL + +ASFYERAG V    G    GSVT+ G+VSP GG+F +PVT ATL +V  F GL ++ +  + FP++N L S+SKY   +E    ++          AR+ L + +++N+++++VG++ ++ GD +    ++LL   YL QN+F   D
Sbjct:  291 LMERTCIICNTSSMPVAAREASVYTAITIGEYYRQMGLDILLLADSTSRWAQAMREMSGRLEEIPGEEAFPAYLESVIASFYERAGIVVLNDG--SFGSVTVGGSVSPAGGNFEEPVTQATLKVVGAFHGLTRERSDARKFPAINPLESWSKYRGVVEFGKTEY----------ARDFLAKGNEINQMMKVVGEEGISNGDFLVYLKSELLDSCYLQQNSFDSVD 503          
BLAST of BQ623087 vs. ExPASy Swiss-Prot
Match: VATA_BORT9 (V-type ATP synthase alpha chain OS=Borrelia turicatae (strain 91E135) GN=atpA PE=3 SV=1)

HSP 1 Score: 198.364 bits (503), Expect = 3.291e-50
Identity = 103/225 (45.78%), Postives = 152/225 (67.56%), Query Frame = 2
Query:    2 VMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYD 676
            +M RT ++ NTS+MPVAAREAS+YT ITI EY+R MG ++ ++ADSTSRWA+A+RE+SGRL E+P +  +PAYL + +ASFYERAG V    G    GSVT+ G+VSP GG+F +PVT ATL +V  F GL ++ +  + FP++N L S+SKY   +ES    +          AR  L + +++N+++++VG++ ++ GD +    ++LL   YL QN+F   D
Sbjct:  291 LMDRTCIICNTSSMPVAAREASVYTAITIGEYYRQMGLDILLLADSTSRWAQAMREMSGRLEEIPGEEAFPAYLESVIASFYERAGIVVLNDG--NVGSVTVGGSVSPAGGNFEEPVTQATLKVVGAFHGLTRERSDARKFPAINPLESWSKYRGVVESEKTGY----------ARSFLAKGNEINQMMKVVGEEGISIGDFLVYLKSELLDACYLQQNSFDSVD 503          
BLAST of BQ623087 vs. ExPASy Swiss-Prot
Match: VATA_BORGA (V-type ATP synthase alpha chain OS=Borrelia garinii GN=atpA PE=3 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 3.639e-49
Identity = 100/225 (44.44%), Postives = 152/225 (67.56%), Query Frame = 2
Query:    2 VMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYD 676
            +M RT ++ NTS+MPVAAREAS+YT ITI EY+R MG ++ ++ADSTSRWA+A+RE+SGRL E+P +  +PAYL + +ASFYERAG V    G    GSVT+ G+VSP GG+F +PVT ATL +V  F GL ++ +  + FP+++ L S+SKY   ++S   ++          AR  L + +++N+++++VG++ ++  D +    ++LL   YL QN+F   D
Sbjct:  291 LMDRTCIICNTSSMPVAAREASVYTAITIGEYYRQMGLDILLLADSTSRWAQAMREMSGRLEEIPGEEAFPAYLESVIASFYERAGIVVLNNGD--IGSVTVGGSVSPAGGNFEEPVTQATLKVVGAFHGLTRERSDARKFPAISPLESWSKYKGVIDSKKAEY----------ARSFLVKGNEINQMMKVVGEEGISSEDFLIYLKSELLDSCYLQQNSFDSVD 503          
BLAST of BQ623087 vs. ExPASy Swiss-Prot
Match: VATA1_TREPA (V-type ATP synthase alpha chain 1 OS=Treponema pallidum GN=atpA1 PE=3 SV=1)

HSP 1 Score: 194.512 bits (493), Expect = 4.752e-49
Identity = 101/229 (44.10%), Postives = 151/229 (65.94%), Query Frame = 2
Query:    2 VMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCP 688
            +M+RT +V NTS+MPVA+REAS+YTG+T+AEY+R MG +V ++ADSTSRWA+ALRE+SGRL E+P +  +PAYL + +A+FYERAG V+   G +  GSVTI G VSP GG+F +PVT ATL +V  F GL ++ +  + +P+V+ L S+SKY + L++    +           R  L+R  ++ +++++VG++  +  D +       L   YL QN+F   D   P
Sbjct:  292 LMERTVIVCNTSSMPVASREASVYTGVTLAEYYRQMGLDVLLLADSTSRWAQALREMSGRLEEIPGEEAFPAYLESCIAAFYERAGVVRLRSGEK--GSVTIGGTVSPAGGNFEEPVTQATLKVVGAFHGLSRERSDARRYPAVHPLDSWSKYPSVLDARAVAY----------GRSFLRRGAEVEQMMRVVGEEGTSMEDFLVYLKGSFLDSVYLQQNSFDTVDSAVP 508          
BLAST of BQ623087 vs. ExPASy Swiss-Prot
Match: VATA_BORBZ (V-type ATP synthase alpha chain OS=Borrelia burgdorferi (strain ZS7) GN=atpA PE=3 SV=1)

HSP 1 Score: 193.741 bits (491), Expect = 8.106e-49
Identity = 99/225 (44.00%), Postives = 151/225 (67.11%), Query Frame = 2
Query:    2 VMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYD 676
            +M RT ++ NTS+MPVAAREAS+YT ITI EY+R MG ++ ++ADSTSRWA+A+RE+SGRL E+P +  +PAYL + +ASFYERAG V    G    GSVT+ G+VSP GG+F +PVT ATL +V  F GL ++ +  + FP+++ L S+SKY   ++    ++          AR  L + +++N+++++VG++ ++  D +    ++LL   YL QN+F   D
Sbjct:  291 LMDRTCIICNTSSMPVAAREASVYTAITIGEYYRQMGLDILLLADSTSRWAQAMREMSGRLEEIPGEEAFPAYLESVIASFYERAGIVVLNNGD--IGSVTVGGSVSPAGGNFEEPVTQATLKVVGAFHGLTRERSDARKFPAISPLESWSKYKGVIDQKKTEY----------ARSFLVKGNEINQMMKVVGEEGISNDDFLIYLKSELLDSCYLQQNSFDSID 503          
BLAST of BQ623087 vs. ExPASy Swiss-Prot
Match: VATA_BORBU (V-type ATP synthase alpha chain OS=Borrelia burgdorferi GN=atpA PE=3 SV=2)

HSP 1 Score: 193.741 bits (491), Expect = 8.106e-49
Identity = 99/225 (44.00%), Postives = 151/225 (67.11%), Query Frame = 2
Query:    2 VMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYD 676
            +M RT ++ NTS+MPVAAREAS+YT ITI EY+R MG ++ ++ADSTSRWA+A+RE+SGRL E+P +  +PAYL + +ASFYERAG V    G    GSVT+ G+VSP GG+F +PVT ATL +V  F GL ++ +  + FP+++ L S+SKY   ++    ++          AR  L + +++N+++++VG++ ++  D +    ++LL   YL QN+F   D
Sbjct:  291 LMDRTCIICNTSSMPVAAREASVYTAITIGEYYRQMGLDILLLADSTSRWAQAMREMSGRLEEIPGEEAFPAYLESVIASFYERAGIVVLNNGD--IGSVTVGGSVSPAGGNFEEPVTQATLKVVGAFHGLTRERSDARKFPAISPLESWSKYKGVIDQKKTEY----------ARSFLVKGNEINQMMKVVGEEGISNDDFLIYLKSELLDSCYLQQNSFDSID 503          
BLAST of BQ623087 vs. ExPASy Swiss-Prot
Match: VATA_BORAP (V-type ATP synthase alpha chain OS=Borrelia afzelii (strain PKo) GN=atpA PE=3 SV=2)

HSP 1 Score: 193.356 bits (490), Expect = 1.059e-48
Identity = 99/225 (44.00%), Postives = 151/225 (67.11%), Query Frame = 2
Query:    2 VMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYD 676
            +M RT ++ NTS+MPVAAREAS+YT ITI EY+R MG ++ ++ADSTSRWA+A+RE+SGRL E+P +  +PAYL + +ASFYERAG V    G    GSVT+ G+VSP GG+F +PVT ATL +V  F GL ++ +  + FP+++ L S+SKY   ++S   ++           R  L + +++N+++++VG++ ++  D +    ++LL   YL QN+F   D
Sbjct:  291 LMDRTCIICNTSSMPVAAREASVYTAITIGEYYRQMGLDILLLADSTSRWAQAMREMSGRLEEIPGEEAFPAYLESVIASFYERAGIVVLNNGD--IGSVTVGGSVSPAGGNFEEPVTQATLKVVGAFHGLTRERSDARKFPAISPLESWSKYKGVIDSKKTEY----------VRSFLVKGNEINQMMKVVGEEGISNEDFLIYLKSELLDSCYLQQNSFDSID 503          
BLAST of BQ623087 vs. ExPASy Swiss-Prot
Match: VATA_TREDE (V-type ATP synthase alpha chain OS=Treponema denticola GN=atpA PE=3 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 2.358e-48
Identity = 101/225 (44.89%), Postives = 150/225 (66.67%), Query Frame = 2
Query:    2 VMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYD 676
            +M+RT ++ NTS+MPVAAREAS+YTG+T+AEY+R MG +V ++ADSTSRWA+ALRE+SGRL E+P +  +PAYL + +A+FYERAG V+   G +  GSVTI G VSP GG+F +PVT ATL +V  F GL ++ +  + +P+++ L S+SKY + L     ++           R  L+R  ++ +++++VG++  +  D I      LL   YL QN+F   D
Sbjct:  292 LMERTIIICNTSSMPVAAREASVYTGVTLAEYYRQMGLDVLLLADSTSRWAQALREMSGRLEEIPGEEAFPAYLESYIAAFYERAGIVRLSDGSK--GSVTIGGTVSPAGGNFEEPVTQATLKVVGAFHGLSRERSDARKYPAIHPLDSWSKYPSVLPLEQVKY----------GRSFLRRGTEVEQMMKVVGEEGTSIEDFIIYLKGDLLDAVYLQQNSFDKVD 504          
BLAST of BQ623087 vs. ExPASy Swiss-Prot
Match: ATPB_LACJO (ATP synthase subunit beta OS=Lactobacillus johnsonii GN=atpD PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 9.025e-24
Identity = 69/227 (30.40%), Postives = 117/227 (51.54%), Query Frame = 2
Query:    2 VMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDM-GYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQFDPDFI-----NIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAF 664
            V+ +T +V    N P  AR     TG+TIAEYFRD+ G +V +  D+  R+ +A  E+S  L  MP+  GY   LA  +    ER    K        GS+T + AV  P  D++DP  + T + +     L+++L ++  +P+V+           LES     DP+ +      +  K + +LQR  +L +I+ ++G D L++ +K+ +E A+ + + +L+QN F
Sbjct:  202 VLSKTAMVFGQMNEPPGARMRVALTGLTIAEYFRDVEGLDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQERITSTK-------KGSITSIQAVYVPADDYTDPAPATTFAHLDATTNLERRLVEQGIYPAVD----------PLESTSSALDPEIVGEEHYEVAVKVQHILQRYQELQDIISVLGMDELSDDEKLIVERARKI-QFFLSQNFF 410          
The following BLAST results are available for this feature:
BLAST of BQ623087 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
VATA_BORDL6.631e-5145.34V-type ATP synthase alpha chain OS=Borrelia dutton... [more]
VATA_BORHD1.477e-5045.33V-type ATP synthase alpha chain OS=Borrelia hermsi... [more]
VATA_BORT93.291e-5045.78V-type ATP synthase alpha chain OS=Borrelia turica... [more]
VATA_BORGA3.639e-4944.44V-type ATP synthase alpha chain OS=Borrelia garini... [more]
VATA1_TREPA4.752e-4944.10V-type ATP synthase alpha chain 1 OS=Treponema pal... [more]
VATA_BORBZ8.106e-4944.00V-type ATP synthase alpha chain OS=Borrelia burgdo... [more]
VATA_BORBU8.106e-4944.00V-type ATP synthase alpha chain OS=Borrelia burgdo... [more]
VATA_BORAP1.059e-4844.00V-type ATP synthase alpha chain OS=Borrelia afzeli... [more]
VATA_TREDE2.358e-4844.89V-type ATP synthase alpha chain OS=Treponema denti... [more]
ATPB_LACJO9.025e-2430.40ATP synthase subunit beta OS=Lactobacillus johnson... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00178 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00178 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623087 ID=BQ623087; Name=BQ623087; organism=Citrus sinensis; type=EST; length=719bp
TGTCATGAAGCGTACAACACTTGTGGCCAACACTTCTAACATGCCTGTGG
CTGCTCGTGAGGCTTCGATTTATACAGGAATCACCATAGCTGAATATTTC
AGAGATATGGGGTACAATGTTAGCATGATGGCAGATTCAACTTCTCGTTG
GGCAGAAGCGTTGCGTGAAATTTCAGGACGGCTGGCAGAAATGCCTGCAG
ATAGTGGATATCCTGCTTACCTGGCTGCACGTTTGGCCTCATTTTATGAA
CGTGCTGGGAAAGTTAAATGTCTTGGTGGACCAGAACGTACTGGTAGTGT
CACAATTGTTGGTGCAGTTTCTCCTCCTGGAGGAGATTTCTCAGATCCTG
TAACATCTGCCACCCTCAGCATTGTGCAGGTCTTCTGGGGTCTGGATAAG
AAACTTGCGCAGAGAAAGCATTTTCCTTCTGTAAACTGGCTTATTTCTTA
CTCGAAGTATTCAACAGCATTAGAGTCTTTCTATGAGCAATTTGATCCGG
ATTTTATTAACATCAGGACAAAGGCTAGAGAGGTGCTGCAGAGAGAAGAT
GACCTGAATGAAATTGTGCAACTTGTCGGAAAGGATGCTTTGGCTGAAGG
AGATAAGATTACGCTAGAGACTGCTAAGCTTTTGAGGGAGGACTATCTTG
CTCAAAACGCATTTACTCCATATGACAAGTTCTGCCCTTTCTACAAGTCT
GTTTGGATGATGCGTACAT
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