BQ623087

Overview
NameBQ623087
Unique NameBQ623087
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length719
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8171 contig Csv1_Contig8171:173..891. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623087 vs. ExPASy Swiss-Prot
Match: VATA_ENCCU (V-type proton ATPase catalytic subunit A OS=Encephalitozoon cuniculi GN=VMA1 PE=1 SV=1)

HSP 1 Score: 372.474 bits (955), Expect = 1.273e-102
Identity = 182/238 (76.47%), Postives = 207/238 (86.97%), Query Frame = 2
Query:    2 VMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMR 715
            +MKRT LVANTSNMPVAAREASIYTGITI+EY RD G NVSMMADSTSRWAEALREISGRLAEMPADSGYPAYL A+LA FYERAG V CLG P RTGSVTIVGAVSPPGGDFSDPVTSATL IVQVFWGLDKKLAQRKHFPS+NW +SYSKY + LE +YE+ DP FI  RTK RE+LQ +DDL+EIVQLVGK+AL+E +K+ L+ +KL++ED+L QN ++ YD +CPF K+  M+R
Sbjct:  304 IMKRTVLVANTSNMPVAAREASIYTGITISEYLRDQGMNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLGAKLAFFYERAGSVVCLGSPRRTGSVTIVGAVSPPGGDFSDPVTSATLGIVQVFWGLDKKLAQRKHFPSINWNLSYSKYFSNLEPYYEEVDPGFIVNRTKCREILQLDDDLSEIVQLVGKNALSETEKLILDISKLIKEDFLQQNGYSRYDNYCPFTKTRLMLR 541          
BLAST of BQ623087 vs. ExPASy Swiss-Prot
Match: VATA_SCHPO (V-type proton ATPase catalytic subunit A OS=Schizosaccharomyces pombe GN=vma1 PE=2 SV=1)

HSP 1 Score: 357.836 bits (917), Expect = 3.246e-98
Identity = 171/238 (71.85%), Postives = 205/238 (86.13%), Query Frame = 2
Query:    2 VMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMR 715
            +MKRTTLVANTSNMPVAAREASIYTGIT+AEY+RD G NVSMMADSTSRWAEALREISGRLAEMPADSGYPAYL A+LASFYERAG+ +CLG P+R G+V+IVGAVSPPGGDFSDPVTSATL IVQVFWGLDKKLAQRKHFPS+N  +SYSKY  AL+ +YE+  P F  +R + ++++Q+ED + EI+QLVGK AL+E DK+TL+ A +++ D+L QN ++ YD+ CP YK+  MMR
Sbjct:  313 IMKRTTLVANTSNMPVAAREASIYTGITLAEYYRDQGKNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLGAKLASFYERAGRARCLGSPDREGTVSIVGAVSPPGGDFSDPVTSATLGIVQVFWGLDKKLAQRKHFPSINTSLSYSKYINALQPWYEERVPGFNTLRDQIKQIIQQEDSMLEIIQLVGKSALSETDKVTLDIAGIIKNDFLQQNGYSDYDRCCPLYKTYHMMR 550          
BLAST of BQ623087 vs. ExPASy Swiss-Prot
Match: VATA_NEUCR (V-type proton ATPase catalytic subunit A OS=Neurospora crassa GN=vma-1 PE=3 SV=1)

HSP 1 Score: 357.451 bits (916), Expect = 4.239e-98
Identity = 170/238 (71.43%), Postives = 205/238 (86.13%), Query Frame = 2
Query:    2 VMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMR 715
            +MKRTTL+ANTSNMPVAAREASIYTGIT+AEYFRD G NV+MMADS+SRWAEALREISGRL EMPAD G+PAYL A+LASFYERAGKV+ LG P R GSV+IVGAVSPPGGDFSDPVTSATL IVQVFWGLDKKLAQRKHFPS+N  +SYSKY T L+ +YE+  PDF  +R + R++L   ++L+++VQLVGK AL++ DKITL+ A L++ED+L QN ++ YD+FCP +K+ WMM+
Sbjct:  301 IMKRTTLIANTSNMPVAAREASIYTGITVAEYFRDQGMNVAMMADSSSRWAEALREISGRLGEMPADQGFPAYLGAKLASFYERAGKVQALGSPPREGSVSIVGAVSPPGGDFSDPVTSATLGIVQVFWGLDKKLAQRKHFPSINTSVSYSKYLTILDKWYEREYPDFPRLRDRIRQLLSDSEELDQVVQLVGKSALSDPDKITLDMATLIKEDFLQQNGYSDYDQFCPIWKTEWMMK 538          
BLAST of BQ623087 vs. ExPASy Swiss-Prot
Match: VATA_YEAST (V-type proton ATPase catalytic subunit A OS=Saccharomyces cerevisiae GN=TFP1 PE=1 SV=3)

HSP 1 Score: 342.813 bits (878), Expect = 1.080e-93
Identity = 165/238 (69.33%), Postives = 197/238 (82.77%), Query Frame = 2
Query:    2 VMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMR 715
            +MKRTTLVANTSNMPVAAREASIYTGIT+AEYFRD G NVSM+ADS+SRWAEALREISGRL EMPAD G+PAYL A+LASFYERAGK   LG P+RTGSV+IV AVSP GGDFSDPVT+ATL I QVFWGLDKKLAQRKHFPS+N  +SYSKY+  L  FY+   P+F  +R + +E+L   ++L ++VQLVGK AL++ DKITL+ A L++ED+L QN ++ YD FCP +K+  MMR
Sbjct:  766 IMKRTTLVANTSNMPVAAREASIYTGITLAEYFRDQGKNVSMIADSSSRWAEALREISGRLGEMPADQGFPAYLGAKLASFYERAGKAVALGSPDRTGSVSIVAAVSPAGGDFSDPVTTATLGITQVFWGLDKKLAQRKHFPSINTSVSYSKYTNVLNKFYDSNYPEFPVLRDRMKEILSNAEELEQVVQLVGKSALSDSDKITLDVATLIKEDFLQQNGYSTYDAFCPIWKTFDMMR 1003          
BLAST of BQ623087 vs. ExPASy Swiss-Prot
Match: VATA_CANTR (V-type proton ATPase catalytic subunit A OS=Candida tropicalis GN=VMA1 PE=3 SV=1)

HSP 1 Score: 342.428 bits (877), Expect = 1.411e-93
Identity = 164/238 (68.91%), Postives = 196/238 (82.35%), Query Frame = 2
Query:    2 VMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMR 715
            +MKRTTLVANTSNMPVAAREASIYTGIT+AEYFRD G NVSM+ADS+SRWAEALREISGRL EMPAD G+PAYL A+LASFYERAGK   LG P+R GSV+IV AVSP GGDFSDPVT++TL I QVFWGLDKKLAQRKHFPS+N  +SYSKY+  L  +Y+   P+F  +R K RE+L   ++L ++VQLVGK AL++ DKITL+ A L++ED+L QN ++ YD FCP +K+  MMR
Sbjct:  783 IMKRTTLVANTSNMPVAAREASIYTGITLAEYFRDQGKNVSMIADSSSRWAEALREISGRLGEMPADQGFPAYLGAKLASFYERAGKATALGSPDRVGSVSIVAAVSPAGGDFSDPVTTSTLGITQVFWGLDKKLAQRKHFPSINTSVSYSKYTNVLNKYYDSNYPEFPQLRDKIREILSNAEELEQVVQLVGKSALSDSDKITLDVATLIKEDFLQQNGYSSYDAFCPIWKTFDMMR 1020          
BLAST of BQ623087 vs. ExPASy Swiss-Prot
Match: VATA_ASHGO (V-type proton ATPase catalytic subunit A OS=Ashbya gossypii GN=VMA1 PE=3 SV=2)

HSP 1 Score: 334.724 bits (857), Expect = 2.942e-91
Identity = 160/238 (67.23%), Postives = 195/238 (81.93%), Query Frame = 2
Query:    2 VMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMR 715
            +MKRTTLVANTSNMPVAAREASIYTGIT+AEYFRD G NVSM+ADS+SRWAEALREISGRL EMPAD G+PAYL A+LASFYERAGK   LG P+R GSV+IV AVSP GGDFSDPVT++TL I QVFWGLDKKLAQRKHFPS+N  +SYSKY+  L  +Y+   P+F  +R + +E+L   ++L ++VQLVGK AL++ DKI L+ A L++ED+L QN ++ YD FCP +K+  MM+
Sbjct:  312 IMKRTTLVANTSNMPVAAREASIYTGITLAEYFRDQGKNVSMIADSSSRWAEALREISGRLGEMPADQGFPAYLGAKLASFYERAGKAVALGSPDRVGSVSIVAAVSPAGGDFSDPVTTSTLGITQVFWGLDKKLAQRKHFPSINTSVSYSKYTNVLNKYYDSNYPEFPVLRDRIKEILSNAEELEQVVQLVGKSALSDKDKIVLDVATLIKEDFLQQNGYSTYDAFCPIWKTYDMMK 549          
BLAST of BQ623087 vs. ExPASy Swiss-Prot
Match: VATA_METKA (V-type ATP synthase alpha chain OS=Methanopyrus kandleri GN=atpA PE=3 SV=1)

HSP 1 Score: 321.242 bits (822), Expect = 3.366e-87
Identity = 157/240 (65.42%), Postives = 193/240 (80.42%), Query Frame = 2
Query:    2 VMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALES-FYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRT 718
            +M+RT LVANTSNMPVAAREA IYTGIT+AEY+RDMGY+V++MADSTSRWAEALREISGRL EMP + GYPAYLA+RLA FYERAG+V CLG  +R GSVT+VGAVSPPGGDFS+PVT  TL IV+VFW LD KLA R+HFP++NWL SYS Y   +E  ++E+   D+  +R +A E+LQRE +L EIVQLVG DAL E +++ LE A+++RED+L QNAF   D +CP  K   M++T
Sbjct:  289 LMERTILVANTSNMPVAAREACIYTGITMAEYYRDMGYDVALMADSTSRWAEALREISGRLEEMPGEEGYPAYLASRLAEFYERAGRVVCLGSDDRVGSVTVVGAVSPPGGDFSEPVTQNTLRIVKVFWALDSKLADRRHFPAINWLQSYSLYLDDVEKWWHEEIGGDWRELRDEAMEILQRESELEEIVQLVGPDALPESERLILEVARMIREDFLQQNAFHEVDTYCPPEKQYEMLKT 528          
BLAST of BQ623087 vs. ExPASy Swiss-Prot
Match: VATA_PYRFU (V-type ATP synthase alpha chain OS=Pyrococcus furiosus GN=atpA PE=3 SV=1)

HSP 1 Score: 312.383 bits (799), Expect = 1.564e-84
Identity = 153/239 (64.02%), Postives = 191/239 (79.92%), Query Frame = 2
Query:    2 VMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALES-FYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMR 715
            +M+RT L+ANTSNMPVAAREASIYTGITIAEYFRDMGY+V++MADSTSRWAEALREISGRL EMP + GYPAYLA+RLA FYERAG+V  LG   R GSV+++GAVSPPGGDFS+PV   TL +V+VFW LD  LA+R+HFP++NWL SYS Y  A++  +++  DP++  +R KA E+LQ+E +L EIV++VG DAL E ++  L  A++LREDYL Q+AF   D +CP  K V MMR
Sbjct:  712 LMERTVLIANTSNMPVAAREASIYTGITIAEYFRDMGYDVALMADSTSRWAEALREISGRLEEMPGEEGYPAYLASRLAEFYERAGRVVTLGSDYRVGSVSVIGAVSPPGGDFSEPVVQNTLRVVKVFWALDADLARRRHFPAINWLTSYSLYVDAVQDWWHKNVDPEWRRMRDKAMELLQKEAELQEIVRIVGPDALPERERAILLVARMLREDYLQQDAFDEVDTYCPPQKQVTMMR 950          
BLAST of BQ623087 vs. ExPASy Swiss-Prot
Match: VATA_PYRAB (V-type ATP synthase alpha chain OS=Pyrococcus abyssi GN=atpA PE=3 SV=1)

HSP 1 Score: 310.457 bits (794), Expect = 5.942e-84
Identity = 152/239 (63.60%), Postives = 191/239 (79.92%), Query Frame = 2
Query:    2 VMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALES-FYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMR 715
            +M+RT L+ANTSNMPVAAREASIYTGITIAEYFRDMGY+V++MADSTSRWAEALREISGRL EMP + GYPAYLA++LA FYERAG+V  LG   R GSV+++GAVSPPGGDFS+PV   TL +V+VFW LD  LA+R+HFP++NWL SYS Y  A++  +++  DP++  +R KA E+LQ+E +L EIV++VG DAL E ++  L  A++LREDYL Q+AF   D +CP  K V MMR
Sbjct:  716 LMERTVLIANTSNMPVAAREASIYTGITIAEYFRDMGYDVALMADSTSRWAEALREISGRLEEMPGEEGYPAYLASKLAEFYERAGRVVTLGSDYRVGSVSVIGAVSPPGGDFSEPVVQNTLRVVKVFWALDADLARRRHFPAINWLTSYSLYVDAVKDWWHKNVDPEWKAMRDKAMELLQKESELQEIVRIVGPDALPERERAILLVARMLREDYLQQDAFDEVDTYCPPEKQVTMMR 954          
BLAST of BQ623087 vs. ExPASy Swiss-Prot
Match: VATA_CLONN (V-type ATP synthase alpha chain OS=Clostridium novyi (strain NT) GN=atpA PE=3 SV=1)

HSP 1 Score: 309.686 bits (792), Expect = 1.014e-83
Identity = 151/239 (63.18%), Postives = 189/239 (79.08%), Query Frame = 2
Query:    2 VMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQ-FDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMR 715
            +M+RT L+ANTSNMPVAAREA IYTGITIAEYFRDMGY+V++MADSTSRWAEALRE+SGRL EMP D GYPAYL +RLA FYERAGKV CLG  ER G++T +GAVSPPGGD S+PVT ATL IV+VFWGLD +LA R+HFP++NWL SYS Y  ++  + ++    +++++RT+A  +LQ E +L EIV+LVG DAL+E D++ LE AK +REDYL QNAF   D +    K   M++
Sbjct:  284 IMERTVLIANTSNMPVAAREACIYTGITIAEYFRDMGYSVALMADSTSRWAEALREMSGRLEEMPGDEGYPAYLGSRLADFYERAGKVVCLGDDEREGAITAIGAVSPPGGDLSEPVTQATLRIVKVFWGLDAQLAYRRHFPAINWLNSYSLYLDSIGRWMDRNVSEEWVDLRTRAMTILQEEANLEEIVRLVGIDALSESDRLKLEVAKSIREDYLMQNAFHDVDTYSSLEKQYKMLK 522          
The following BLAST results are available for this feature:
BLAST of BQ623087 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
VATA_ENCCU1.273e-10276.47V-type proton ATPase catalytic subunit A OS=Enceph... [more]
VATA_SCHPO3.246e-9871.85V-type proton ATPase catalytic subunit A OS=Schizo... [more]
VATA_NEUCR4.239e-9871.43V-type proton ATPase catalytic subunit A OS=Neuros... [more]
VATA_YEAST1.080e-9369.33V-type proton ATPase catalytic subunit A OS=Saccha... [more]
VATA_CANTR1.411e-9368.91V-type proton ATPase catalytic subunit A OS=Candid... [more]
VATA_ASHGO2.942e-9167.23V-type proton ATPase catalytic subunit A OS=Ashbya... [more]
VATA_METKA3.366e-8765.42V-type ATP synthase alpha chain OS=Methanopyrus ka... [more]
VATA_PYRFU1.564e-8464.02V-type ATP synthase alpha chain OS=Pyrococcus furi... [more]
VATA_PYRAB5.942e-8463.60V-type ATP synthase alpha chain OS=Pyrococcus abys... [more]
VATA_CLONN1.014e-8363.18V-type ATP synthase alpha chain OS=Clostridium nov... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00178 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00178 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623087 ID=BQ623087; Name=BQ623087; organism=Citrus sinensis; type=EST; length=719bp
TGTCATGAAGCGTACAACACTTGTGGCCAACACTTCTAACATGCCTGTGG
CTGCTCGTGAGGCTTCGATTTATACAGGAATCACCATAGCTGAATATTTC
AGAGATATGGGGTACAATGTTAGCATGATGGCAGATTCAACTTCTCGTTG
GGCAGAAGCGTTGCGTGAAATTTCAGGACGGCTGGCAGAAATGCCTGCAG
ATAGTGGATATCCTGCTTACCTGGCTGCACGTTTGGCCTCATTTTATGAA
CGTGCTGGGAAAGTTAAATGTCTTGGTGGACCAGAACGTACTGGTAGTGT
CACAATTGTTGGTGCAGTTTCTCCTCCTGGAGGAGATTTCTCAGATCCTG
TAACATCTGCCACCCTCAGCATTGTGCAGGTCTTCTGGGGTCTGGATAAG
AAACTTGCGCAGAGAAAGCATTTTCCTTCTGTAAACTGGCTTATTTCTTA
CTCGAAGTATTCAACAGCATTAGAGTCTTTCTATGAGCAATTTGATCCGG
ATTTTATTAACATCAGGACAAAGGCTAGAGAGGTGCTGCAGAGAGAAGAT
GACCTGAATGAAATTGTGCAACTTGTCGGAAAGGATGCTTTGGCTGAAGG
AGATAAGATTACGCTAGAGACTGCTAAGCTTTTGAGGGAGGACTATCTTG
CTCAAAACGCATTTACTCCATATGACAAGTTCTGCCCTTTCTACAAGTCT
GTTTGGATGATGCGTACAT
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