BQ623087
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of BQ623087 vs. ExPASy Swiss-Prot
Match: ATPB_CORDI (ATP synthase subunit beta OS=Corynebacterium diphtheriae GN=atpD PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 6.053e-20 Identity = 68/227 (29.96%), Postives = 114/227 (50.22%), Query Frame = 2 Query: 2 VMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGY-NVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQFDPDFIN-----IRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAF 664 V++ T LV + P R +G+T+AEYFRD+ + +V + D+ R+ +A E+S L MP+ GY LA + ER +K S+T + AV P D++DP + T + + LD+ +A + +P+VN L S S+ +P + + + +LQ+ +L +I+ ++G D L+E DKIT++ A+ L E +L QN F Sbjct: 216 VLQDTALVFGQMDEPPGVRMRVALSGLTMAEYFRDVQHQDVLLFIDNIFRFTQAGSEVSTLLGRMPSAVGYQPTLADEMGVLQERITSIK-------GKSITSLQAVYVPADDYTDPAPATTFAHLDATTELDRAIASKGIYPAVNPLTSTSRI----------LEPGIVGERHYAVAQRVINILQKNKELQDIIAILGMDELSEEDKITVQRARRL-ERFLGQNFF 424
BLAST of BQ623087 vs. ExPASy Swiss-Prot
Match: ATPB_CLOTH (ATP synthase subunit beta OS=Clostridium thermocellum (strain ATCC 27405 / DSM 1237) GN=atpD PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 6.053e-20 Identity = 68/229 (29.69%), Postives = 114/229 (49.78%), Query Frame = 2 Query: 2 VMKRTTLVANTSNMPVAAREASIYTGITIAEYFRD-MGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETA----KLLREDYLAQNAFTPY 673 V+++T LV N P +R TG+T+AEYFRD +G +V + D+ R+ +A E+S L +P+ GY LA + + ER K GS+T V AV P D +DP + T + + L + + ++ +P+V+ L S S+ E + + K +E+LQR +L +I+ ++G D L+E DK+ + A + L + + A+T Y Sbjct: 202 VIEKTALVFGQMNEPPGSRMRVGLTGLTMAEYFRDELGQDVLLFIDNIFRFIQAGSEVSALLGRIPSAVGYQPTLATEMGALQERITSTK-------KGSITSVQAVYVPADDLTDPAPATTFTHLDATTVLSRHIVEQGIYPAVDPLDSTSRVLDRRIVGDEHY-----TVARKVQEILQRYKELQDIIAILGLDELSEEDKLIVFRARKIQRFLSQPFFVAEAYTGY 418
BLAST of BQ623087 vs. ExPASy Swiss-Prot
Match: ATPB_CHLL2 (ATP synthase subunit beta OS=Chlorobium limicola (strain DSM 245 / NBRC 103803) GN=atpD PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 6.053e-20 Identity = 69/232 (29.74%), Postives = 110/232 (47.41%), Query Frame = 2 Query: 2 VMKRTTLVANTSNMPVAAREASIYTGITIAEYFRD-MGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQFDP-----DFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETA----KLLREDYLAQNAFT 667 V+++T LV N P AR+ TG++IAEYFRD +V + D+ R+ +A E+S L MP+ GY LA + +R K GSVT V A+ P D +DP + + + L + +A+ +P+V+ L S S+ DP D N +++LQR DL +I+ ++G D L++ DK+ + A + L + + AFT Sbjct: 200 VIEKTALVFGQMNEPPGARQRVALTGLSIAEYFRDEENRDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGELQDRITSTK-------NGSVTSVQAIYVPADDLTDPAPATAFAHLDATTVLSRSIAELGIYPAVDPLDSTSRI----------LDPNIVGDDHYNTAQAVKQILQRYKDLQDIIAILGMDELSDEDKLVVSRARKVQRFLSQPFFVAEAFT 414
BLAST of BQ623087 vs. ExPASy Swiss-Prot
Match: ATPB_ARCB4 (ATP synthase subunit beta OS=Arcobacter butzleri (strain RM4018) GN=atpD PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 6.053e-20 Identity = 67/222 (30.18%), Postives = 113/222 (50.90%), Query Frame = 2 Query: 2 VMKRTTLVANTSNMPVAAREASIYTGITIAEYFRD-MGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAF 664 V+ + L + P AR TG+T+AEYFRD G +V M D+ R+A++ E+S L +P+ GY LA+ + ER GS+T V AV P D +DP ++ + + L++K+A++ +P+V+ L S S+ +A + + N + VLQ+ DL +I+ ++G D L+E DK+ + A+ + E +L+Q F Sbjct: 201 VLDKVALCYGQMSEPPGARNRIALTGLTMAEYFRDEKGLDVLMFIDNIFRFAQSGSEMSALLGRIPSAVGYQPTLASEMGKLQERITSTS-------KGSITSVQAVYVPADDLTDPAPASVFAHLDATTVLNRKIAEKGIYPAVDPLDSTSRILSA-----DIIGQEHYNTARGVQSVLQKYKDLQDIIAILGMDELSESDKLVVARARKI-ERFLSQPFF 409
BLAST of BQ623087 vs. ExPASy Swiss-Prot
Match: ATPB_YERPY (ATP synthase subunit beta OS=Yersinia pseudotuberculosis serotype O:3 (strain YPIII) GN=atpD PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 7.906e-20 Identity = 68/221 (30.77%), Postives = 109/221 (49.32%), Query Frame = 2 Query: 2 VMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAF 664 V+ + +LV N P R TG+T+AE FRD G +V + D+ R+ A E+S L MP+ GY LA + ER K TGS+T V AV P D +DP + T + + L +++A +P+V+ L S S+ L E +D + + +LQR +L +I+ ++G D L+E DK+ + A+ ++ +L+Q F Sbjct: 199 VLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFIDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERITSTK-------TGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYD-----VARGVQSILQRYQELKDIIAILGMDELSEDDKLVVSRARKIQR-FLSQPFF 406
BLAST of BQ623087 vs. ExPASy Swiss-Prot
Match: ATPB_YERPS (ATP synthase subunit beta OS=Yersinia pseudotuberculosis GN=atpD PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 7.906e-20 Identity = 68/221 (30.77%), Postives = 109/221 (49.32%), Query Frame = 2 Query: 2 VMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAF 664 V+ + +LV N P R TG+T+AE FRD G +V + D+ R+ A E+S L MP+ GY LA + ER K TGS+T V AV P D +DP + T + + L +++A +P+V+ L S S+ L E +D + + +LQR +L +I+ ++G D L+E DK+ + A+ ++ +L+Q F Sbjct: 199 VLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFIDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERITSTK-------TGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYD-----VARGVQSILQRYQELKDIIAILGMDELSEDDKLVVSRARKIQR-FLSQPFF 406
BLAST of BQ623087 vs. ExPASy Swiss-Prot
Match: ATPB_YERPP (ATP synthase subunit beta OS=Yersinia pestis (strain Pestoides F) GN=atpD PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 7.906e-20 Identity = 68/221 (30.77%), Postives = 109/221 (49.32%), Query Frame = 2 Query: 2 VMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAF 664 V+ + +LV N P R TG+T+AE FRD G +V + D+ R+ A E+S L MP+ GY LA + ER K TGS+T V AV P D +DP + T + + L +++A +P+V+ L S S+ L E +D + + +LQR +L +I+ ++G D L+E DK+ + A+ ++ +L+Q F Sbjct: 199 VLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFIDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERITSTK-------TGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYD-----VARGVQSILQRYQELKDIIAILGMDELSEDDKLVVSRARKIQR-FLSQPFF 406
BLAST of BQ623087 vs. ExPASy Swiss-Prot
Match: ATPB_YERPN (ATP synthase subunit beta OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=atpD PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 7.906e-20 Identity = 68/221 (30.77%), Postives = 109/221 (49.32%), Query Frame = 2 Query: 2 VMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAF 664 V+ + +LV N P R TG+T+AE FRD G +V + D+ R+ A E+S L MP+ GY LA + ER K TGS+T V AV P D +DP + T + + L +++A +P+V+ L S S+ L E +D + + +LQR +L +I+ ++G D L+E DK+ + A+ ++ +L+Q F Sbjct: 199 VLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFIDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERITSTK-------TGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYD-----VARGVQSILQRYQELKDIIAILGMDELSEDDKLVVSRARKIQR-FLSQPFF 406
BLAST of BQ623087 vs. ExPASy Swiss-Prot
Match: ATPB_YERPG (ATP synthase subunit beta OS=Yersinia pestis bv. Antiqua (strain Angola) GN=atpD PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 7.906e-20 Identity = 68/221 (30.77%), Postives = 109/221 (49.32%), Query Frame = 2 Query: 2 VMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAF 664 V+ + +LV N P R TG+T+AE FRD G +V + D+ R+ A E+S L MP+ GY LA + ER K TGS+T V AV P D +DP + T + + L +++A +P+V+ L S S+ L E +D + + +LQR +L +I+ ++G D L+E DK+ + A+ ++ +L+Q F Sbjct: 199 VLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFIDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERITSTK-------TGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYD-----VARGVQSILQRYQELKDIIAILGMDELSEDDKLVVSRARKIQR-FLSQPFF 406
BLAST of BQ623087 vs. ExPASy Swiss-Prot
Match: ATPB_YERPE (ATP synthase subunit beta OS=Yersinia pestis GN=atpD PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 7.906e-20 Identity = 68/221 (30.77%), Postives = 109/221 (49.32%), Query Frame = 2 Query: 2 VMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAF 664 V+ + +LV N P R TG+T+AE FRD G +V + D+ R+ A E+S L MP+ GY LA + ER K TGS+T V AV P D +DP + T + + L +++A +P+V+ L S S+ L E +D + + +LQR +L +I+ ++G D L+E DK+ + A+ ++ +L+Q F Sbjct: 199 VLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFIDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERITSTK-------TGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYD-----VARGVQSILQRYQELKDIIAILGMDELSEDDKLVVSRARKIQR-FLSQPFF 406 The following BLAST results are available for this feature:
BLAST of BQ623087 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >BQ623087 ID=BQ623087; Name=BQ623087; organism=Citrus sinensis; type=EST; length=719bpback to top |