BQ623087
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of BQ623087 vs. ExPASy Swiss-Prot
Match: ATPB_COREF (ATP synthase subunit beta OS=Corynebacterium efficiens GN=atpD PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 7.906e-20 Identity = 71/225 (31.56%), Postives = 112/225 (49.78%), Query Frame = 2 Query: 2 VMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDM-GYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKY---STALESFYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAF 664 V++ T LV + P R +G+T+AEYFRD+ +V + D+ R+ +A E+S L MP+ GY LA + ER K S+T + AV P D++DP + T + + LD+ +A + +P+VN L S S+ S E YE + + +LQ+ +L +I+ ++G D L+E DKIT+ A+ L E +L QN F Sbjct: 216 VLQDTALVFGQMDEPPGVRMRVALSGLTMAEYFRDVQNQDVLLFIDNIFRFTQAGSEVSTLLGRMPSAVGYQPTLADEMGVLQERITSTK-------GRSITSLQAVYVPADDYTDPAPATTFAHLDATTELDRSIASKGIYPAVNPLTSTSRILEPSIVGERHYE--------VSQRVIGILQKNKELQDIIAILGMDELSEEDKITVARARRL-ERFLGQNFF 424
BLAST of BQ623087 vs. ExPASy Swiss-Prot
Match: ATPB_CAUSK (ATP synthase subunit beta OS=Caulobacter sp. (strain K31) GN=atpD PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 7.906e-20 Identity = 66/207 (31.88%), Postives = 103/207 (49.76%), Query Frame = 2 Query: 11 RTTLVANTSNMPVAAREASIYTGITIAEYFRDM-GYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAK 628 R LV N P AR TG++IAEYFRD G +V + D+ R+ +A E+S L +P+ GY LA + + ER GS+T V A+ P D +DP +A+ + + L + +A + FP+V+ L S S+ L E +D + +EVLQ+ L +I+ ++G D L+E DK+T+ A+ Sbjct: 279 RCALVYGQMNEPPGARARVALTGLSIAEYFRDEEGKDVLLFVDNIFRFTQAGAEVSALLGRIPSAVGYQPTLATEMGNLQERITSTN-------KGSITSVQAIYVPADDLTDPAPAASFAHLDATTVLSRDIAAQAIFPAVDPLDSTSRIMDPLIIGQEHYD-----VARSVQEVLQQYKSLKDIIAILGMDELSEEDKLTVARAR 473
BLAST of BQ623087 vs. ExPASy Swiss-Prot
Match: ATPB_VESOH (ATP synthase subunit beta OS=Vesicomyosocius okutanii subsp. Calyptogena okutanii (strain HA) GN=atpD PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.033e-19 Identity = 68/226 (30.09%), Postives = 112/226 (49.56%), Query Frame = 2 Query: 2 VMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQFDP-----DFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAF 664 V+ + +LV N P R TG+T+AEYFRD G +V + D+ R+ A E+S L MP+ GY LA+ + + ER K GS+T + AV P D +DP + T + + L +++A+ +P+V+ L+S Q DP + N+ + VLQR +L +I+ ++G D L+E DK ++ A+ ++ +L+Q F Sbjct: 197 VLNKVSLVYGQMNEPPGNRLRVALTGLTMAEYFRDEGRDVLLFIDNIYRYTLAGTEVSALLGRMPSAVGYQPTLASEMGALQERITSTK-------KGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRQVAELGIYPAVD----------PLDSTSRQLDPLIVGEEHYNVARGVQGVLQRYKELKDIIAILGMDELSEEDKRSVSRARKVQR-FLSQPFF 404
BLAST of BQ623087 vs. ExPASy Swiss-Prot
Match: ATPB_SODGM (ATP synthase subunit beta OS=Sodalis glossinidius (strain morsitans) GN=atpD PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.033e-19 Identity = 68/221 (30.77%), Postives = 109/221 (49.32%), Query Frame = 2 Query: 2 VMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAF 664 V+ + +LV N P R TG+T+AE FRD G +V + D+ R+ A E+S L MP+ GY LA + ER K TGS+T V AV P D +DP + T + + L +++A +P+V+ L S S+ L E +D + + +LQR +L +I+ ++G D L+E DK+ + A+ ++ +L+Q F Sbjct: 199 VIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFIDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERITSTK-------TGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYD-----VARGVQSILQRYQELKDIIAILGMDELSEDDKLVVSRARKIQR-FLSQPFF 406
BLAST of BQ623087 vs. ExPASy Swiss-Prot
Match: ATPB_SHESR (ATP synthase subunit beta OS=Shewanella sp. (strain MR-7) GN=atpD PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.033e-19 Identity = 68/218 (31.19%), Postives = 108/218 (49.54%), Query Frame = 2 Query: 2 VMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQ 655 V+ + +V N P R TG+T+AE FRD G +V + D+ R+ A E+S L MP+ GY LA + ER K TGS+T V AV P D +DP + T + + L +++A +P+V+ L S S+ L E +D + + VLQR +L +I+ ++G D L++ DK+T+ A+ + E +L+Q Sbjct: 201 VLDKVAMVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERITSTK-------TGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYD-----VANGVQTVLQRYKELKDIIAILGMDELSDDDKMTVSRARKI-ERFLSQ 405
BLAST of BQ623087 vs. ExPASy Swiss-Prot
Match: ATPB_SHESM (ATP synthase subunit beta OS=Shewanella sp. (strain MR-4) GN=atpD PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.033e-19 Identity = 68/218 (31.19%), Postives = 108/218 (49.54%), Query Frame = 2 Query: 2 VMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQ 655 V+ + +V N P R TG+T+AE FRD G +V + D+ R+ A E+S L MP+ GY LA + ER K TGS+T V AV P D +DP + T + + L +++A +P+V+ L S S+ L E +D + + VLQR +L +I+ ++G D L++ DK+T+ A+ + E +L+Q Sbjct: 201 VLDKVAMVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERITSTK-------TGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYD-----VANGVQTVLQRYKELKDIIAILGMDELSDDDKMTVSRARKI-ERFLSQ 405
BLAST of BQ623087 vs. ExPASy Swiss-Prot
Match: ATPB_SHEON (ATP synthase subunit beta OS=Shewanella oneidensis GN=atpD PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.033e-19 Identity = 68/218 (31.19%), Postives = 108/218 (49.54%), Query Frame = 2 Query: 2 VMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQ 655 V+ + +V N P R TG+T+AE FRD G +V + D+ R+ A E+S L MP+ GY LA + ER K TGS+T V AV P D +DP + T + + L +++A +P+V+ L S S+ L E +D + + VLQR +L +I+ ++G D L++ DK+T+ A+ + E +L+Q Sbjct: 201 VLDKVAMVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERITSTK-------TGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYD-----VANGVQTVLQRYKELKDIIAILGMDELSDDDKMTVSRARKI-ERFLSQ 405
BLAST of BQ623087 vs. ExPASy Swiss-Prot
Match: ATPB_SERP5 (ATP synthase subunit beta OS=Serratia proteamaculans (strain 568) GN=atpD PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.033e-19 Identity = 68/221 (30.77%), Postives = 108/221 (48.87%), Query Frame = 2 Query: 2 VMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAF 664 V+ + +LV N P R TG+T+AE FRD G +V + D+ R+ A E+S L MP+ GY LA + ER K TGS+T V AV P D +DP + T + + L + +A +P+V+ L S S+ L E +D + + +LQR +L +I+ ++G D L+E DK+ + A+ ++ +L+Q F Sbjct: 199 VLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERITSTK-------TGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRNIASLGIYPAVDPLDSTSRQLDPLVVGQEHYD-----VARGVQSILQRYQELKDIIAILGMDELSEEDKLVVSRARKIQR-FLSQPFF 406
BLAST of BQ623087 vs. ExPASy Swiss-Prot
Match: ATPB_RUBXD (ATP synthase subunit beta OS=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) GN=atpD PE=3 SV=2) HSP 1 Score: 97.0561 bits (240), Expect = 1.033e-19 Identity = 70/227 (30.84%), Postives = 110/227 (48.46%), Query Frame = 2 Query: 2 VMKRTTLVANTSNMPVAAREASIYTGITIAEYFRD-MGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQFDPDFI-----NIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAF 664 V+K T L+ N P AR TG+TIAEYFRD +G +V D+ R+A+A E+S + MP++ GY L + + ER K GS+T AV P D +DP + + L + L ++ FP+V+ L S S DPD + + + + +LQR +L +I+ ++G D L+E DK+ + A+ L+ +L+Q F Sbjct: 217 VLKNTALIFGQMNEPPGARFRVGLTGVTIAEYFRDVLGQDVLFFLDNIFRFAQAGNEVSALMGRMPSEVGYQPTLGTEMGALQERITSTK-------KGSITSFQAVYVPADDPTDPAPFTVFAHLDSTVELSRSLFEQAIFPAVDPLASSSTI----------LDPDVVGQEHYEVAQEVKGILQRYKELQDIIAILGIDELSEEDKVIVARARRLQR-FLSQPFF 425
BLAST of BQ623087 vs. ExPASy Swiss-Prot
Match: ATPB_RHIEC (ATP synthase subunit beta OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=atpD PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.033e-19 Identity = 64/218 (29.36%), Postives = 107/218 (49.08%), Query Frame = 2 Query: 11 RTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAF 664 + LV N P AR TG+T+AE+FRD G +V D+ R+ +A E+S L +P+ GY LA + ER TGS+T V A+ P D +DP + + + + L + +A++ +P+V+ L S S+ + E ++ + K + LQR L +I+ ++G D L+E DK+ + A+ + E +L+Q F Sbjct: 214 KAALVYGQMNEPPGARARVALTGLTVAEHFRDQGQDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGQMQERITTT-------TTGSITSVQAIYVPADDLTDPAPATSFAHLDATTVLSRSIAEKGIYPAVDPLDSTSRMLDPMVVGEEHYE-----VARKVQSTLQRYKALQDIIAILGMDELSEEDKLAVARARKI-ERFLSQPFF 418 The following BLAST results are available for this feature:
BLAST of BQ623087 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >BQ623087 ID=BQ623087; Name=BQ623087; organism=Citrus sinensis; type=EST; length=719bpback to top |