BQ623087
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of BQ623087 vs. ExPASy Swiss-Prot
Match: ATPB_DEHSB (ATP synthase subunit beta OS=Dehalococcoides sp. (strain BAV1) GN=atpD PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.033e-19 Identity = 69/227 (30.40%), Postives = 111/227 (48.90%), Query Frame = 2 Query: 2 VMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMG-YNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQFDPDFI-----NIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAF 664 V+ +TT+V N A R TG+T+AEYFRD +V + D+ R+ A E+S L MP+ GY LA + + ER K GS+T AV P D++DP AT + L++ LA++ +P+V+ L S S+ DP + + ++VLQR DL +++ ++G + L+E DK+T+ A+ ++ +L Q F Sbjct: 199 VLPKTTMVFGQMNELPAVRLRIALTGLTMAEYFRDEERQDVLLFIDNIYRYTLAGMEVSALLGRMPSAVGYQPTLATEMGALQERIASTK-------QGSITSFQAVYVPADDYTDPGVVATFGHLDAMIALERSLAEQALYPAVDPLASNSRI----------LDPQVVGEEHYKVARDVQKVLQRYKDLQDVIAILGMEELSEEDKLTVARARRIQR-FLTQPMF 407
BLAST of BQ623087 vs. ExPASy Swiss-Prot
Match: ATPB_DEHE1 (ATP synthase subunit beta OS=Dehalococcoides ethenogenes (strain 195) GN=atpD PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.033e-19 Identity = 69/227 (30.40%), Postives = 111/227 (48.90%), Query Frame = 2 Query: 2 VMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMG-YNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQFDPDFI-----NIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAF 664 V+ +TT+V N A R TG+T+AEYFRD +V + D+ R+ A E+S L MP+ GY LA + + ER K GS+T AV P D++DP AT + L++ LA++ +P+V+ L S S+ DP + + ++VLQR DL +++ ++G + L+E DK+T+ A+ ++ +L Q F Sbjct: 199 VLPKTTMVFGQMNELPAVRLRIALTGLTMAEYFRDEERQDVLLFIDNIYRYTLAGMEVSALLGRMPSAVGYQPTLATEMGALQERIASTK-------QGSITSFQAVYVPADDYTDPGVVATFGHLDAMIALERSLAEQALYPAVDPLASNSRI----------LDPQVVGEEHYQVARDVQKVLQRYKDLQDVIAILGMEELSEEDKLTVARARRIQR-FLTQPMF 407
BLAST of BQ623087 vs. ExPASy Swiss-Prot
Match: ATPB_CORA7 (ATP synthase subunit beta OS=Corynebacterium aurimucosum (strain ATCC 700975 / DSM 44827 / CN-1) GN=atpD PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.033e-19 Identity = 70/225 (31.11%), Postives = 113/225 (50.22%), Query Frame = 2 Query: 2 VMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDM-GYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKY---STALESFYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAF 664 V++ T LV + P R +G+T+AEYFRD+ +V + D+ R+ +A E+S L MP+ GY LA + ER K S+T + AV P D++DP + T + + LD+ +A + +P+VN L S S+ S E YE + + +LQ+ +L +I+ ++G D L+E DKIT++ A+ + E +L QN F Sbjct: 216 VLQDTALVFGQMDEPPGVRMRVALSGLTMAEYFRDVQNQDVLLFIDNIFRFTQAGSEVSTLLGRMPSAVGYQPTLADEMGVLQERITSTK-------GKSITSLQAVYVPADDYTDPAPATTFAHLDATTELDRGIASKGIYPAVNPLTSTSRILEPSIVGERHYE--------VAQRVIGILQKNKELQDIIAILGMDELSEEDKITVQRARRI-ERFLGQNFF 424
BLAST of BQ623087 vs. ExPASy Swiss-Prot
Match: ATPB_CHRSD (ATP synthase subunit beta OS=Chromohalobacter salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB 13768) GN=atpD PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.033e-19 Identity = 70/221 (31.67%), Postives = 109/221 (49.32%), Query Frame = 2 Query: 2 VMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAF 664 V+ + +LV N P R TG+TIAE FRD G +V + D+ R+ A E+S L MP+ GY LA + ER K TGS+T V AV P D +DP + T S + L + +A+ +P+++ L S S+ L E + N + VLQR +L +I+ ++G D L++ DK+T+ A+ ++ +L+Q F Sbjct: 196 VLDKVSLVYGQMNEPPGNRLRVALTGLTIAEKFRDDGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERITSTK-------TGSITSVQAVYVPADDLTDPSPATTFSHLDATVVLARSIAELGIYPAIDPLDSTSRQLDPLTVGEEHY-----NTARGVQGVLQRYKELKDIIAILGMDELSDEDKLTVSRARKIQR-FLSQPFF 403
BLAST of BQ623087 vs. ExPASy Swiss-Prot
Match: ATPB_BACFR (ATP synthase subunit beta OS=Bacteroides fragilis GN=atpD PE=3 SV=2) HSP 1 Score: 97.0561 bits (240), Expect = 1.033e-19 Identity = 66/229 (28.82%), Postives = 116/229 (50.66%), Query Frame = 2 Query: 11 RTTLVANTSNMPVAAREASIYTGITIAEYFRDMGY-----NVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKF 682 + TLV N P AR + +G+T+AE FRDMG ++ D+ R+ +A E+S L MP+ GY LA + + ER K TGS+T V AV P D +DP + T + + L +K+ + +P+V+ L S S+ E +D + + +++LQR +L +I+ ++G + L++ D++ + A+ ++ +L+Q FT ++F Sbjct: 236 QATLVFGQMNEPPGARASVALSGLTVAESFRDMGAKSGARDILFFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGAMQERITSTK-------TGSITSVQAVYVPADDLTDPAPATTFTHLDATTVLSRKITELGIYPAVDPLESTSRILDPHIVGQEHYD-----VAQRVKQILQRNKELQDIISILGMEELSDADRLVVNRARRVQR-FLSQ-PFTVAEQF 450
BLAST of BQ623087 vs. ExPASy Swiss-Prot
Match: ATPB_BACFN (ATP synthase subunit beta OS=Bacteroides fragilis (strain ATCC 25285 / NCTC 9343) GN=atpD PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.033e-19 Identity = 66/229 (28.82%), Postives = 116/229 (50.66%), Query Frame = 2 Query: 11 RTTLVANTSNMPVAAREASIYTGITIAEYFRDMGY-----NVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKF 682 + TLV N P AR + +G+T+AE FRDMG ++ D+ R+ +A E+S L MP+ GY LA + + ER K TGS+T V AV P D +DP + T + + L +K+ + +P+V+ L S S+ E +D + + +++LQR +L +I+ ++G + L++ D++ + A+ ++ +L+Q FT ++F Sbjct: 236 QATLVFGQMNEPPGARASVALSGLTVAESFRDMGAKSGARDILFFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGAMQERITSTK-------TGSITSVQAVYVPADDLTDPAPATTFTHLDATTVLSRKITELGIYPAVDPLESTSRILDPHIVGQEHYD-----VAQRVKQILQRNKELQDIISILGMEELSDADRLVVNRARRVQR-FLSQ-PFTVAEQF 450
BLAST of BQ623087 vs. ExPASy Swiss-Prot
Match: ATPB_SHESA (ATP synthase subunit beta OS=Shewanella sp. (strain ANA-3) GN=atpD PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.349e-19 Identity = 68/218 (31.19%), Postives = 108/218 (49.54%), Query Frame = 2 Query: 2 VMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQ 655 V+ + +V N P R TG+T+AE FRD G +V + D+ R+ A E+S L MP+ GY LA + ER K TGS+T V AV P D +DP + T + + L +++A +P+V+ L S S+ L E +D + + VLQR +L +I+ ++G D L++ DK+T+ A+ + E +L+Q Sbjct: 201 VLDKVAMVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERITSTK-------TGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYD-----VANGVQTVLQRYKELKDIIAILGMDELSDEDKMTVSRARKI-ERFLSQ 405
BLAST of BQ623087 vs. ExPASy Swiss-Prot
Match: ATPB_SHELP (ATP synthase subunit beta OS=Shewanella loihica (strain ATCC BAA-1088 / PV-4) GN=atpD PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.349e-19 Identity = 69/226 (30.53%), Postives = 108/226 (47.79%), Query Frame = 2 Query: 2 VMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQFDPDFI-----NIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAF 664 V+ + +V N P R TG+T+AE FRD G +V + D+ R+ A E+S L MP+ GY LA + ER K TGS+T V AV P D +DP + T + + L + +A +P+V+ L+S Q DP + ++ + + VLQR +L +I+ ++G D L++ DK T+ A+ + E YL+Q F Sbjct: 197 VLDKVAMVYGQMNEPPGNRLRVALTGLTMAEKFRDEGKDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERITSTK-------TGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRNIASLGIYPAVD----------PLDSTSRQLDPQVVGQEHYDVASGVQNVLQRYKELKDIIAILGMDELSDEDKTTVARARKI-EKYLSQPFF 404
BLAST of BQ623087 vs. ExPASy Swiss-Prot
Match: ATPB_MYCS5 (ATP synthase subunit beta OS=Mycoplasma synoviae (strain 53) GN=atpD PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.349e-19 Identity = 75/230 (32.61%), Postives = 115/230 (50.00%), Query Frame = 2 Query: 2 VMKRTTLVANTSNMPVAAREASIYTGITIAEYFRD-MGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQFD--PDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKF 682 V+ +T LV N P AR TG+T+AEYFRD +V + D+ R+ +A E+S L +P+ GY LA + + ER R+GS+T V AV P D +DP + T S + LD+ +A +P+++ L S S+ L E + D INI LQR +L +I+ ++G L+E DK + A+ +R ++L+Q FT +KF Sbjct: 203 VLDKTALVFGQMNEPPGARMRVALTGLTMAEYFRDKQNQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATEMGALQERITST-------RSGSITSVQAVYVPADDLTDPAPATTFSHLDAKTVLDRNVAALGIYPAIDPLESSSRLLDPLVVGQEHYKVAQDVINI-------LQRFKELQDIIAILGMGELSEEDKKIVARARKIR-NFLSQ-PFTVAEKF 416
BLAST of BQ623087 vs. ExPASy Swiss-Prot
Match: ATPB_IDILO (ATP synthase subunit beta OS=Idiomarina loihiensis GN=atpD PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.349e-19 Identity = 71/226 (31.42%), Postives = 109/226 (48.23%), Query Frame = 2 Query: 2 VMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQFDPDFI-----NIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAF 664 V+ + +LV N P R TG+TIAE FRD G +V D+ R+ A E+S L MP+ GY LA + ER K TGS+T V AV P D +DP + T + + L++ +A +P+V+ L+S Q DP I + +EVLQR +L +I+ ++G D L+E DK+++ A+ ++ +L+Q F Sbjct: 200 VLDKVSLVYGQMNEPPGNRLRVALTGLTIAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERITSTK-------TGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLNRDIASLGIYPAVD----------PLDSTSRQLDPQVIGDEHYDTAMGVQEVLQRYKELKDIIAILGMDELSEEDKLSVSRARKIQR-FLSQPFF 407 The following BLAST results are available for this feature:
BLAST of BQ623087 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >BQ623087 ID=BQ623087; Name=BQ623087; organism=Citrus sinensis; type=EST; length=719bpback to top |