BQ623101

Overview
NameBQ623101
Unique NameBQ623101
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length646
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig12771 contig Csv1_Contig12771:132..777. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623101 vs. ExPASy Swiss-Prot
Match: ISPF_YERPG (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Yersinia pestis bv. Antiqua (strain Angola) GN=ispF PE=3 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 1.264e-31
Identity = 69/134 (51.49%), Postives = 93/134 (69.40%), Query Frame = 3
Query:  246 RVGHGFDLHRL-EPGY-PLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPPGGNLKAKT 641
            R+GHGFD+H+  E G  PLIIGG+ +P+E+G  AHSDGDV LH   DA+LGA  L DIG++FPD+DP +KGA S   ++EA R +   GY++GNLD T+I Q PK++P+   +R NL+E L       N+KA T
Sbjct:    2 RIGHGFDVHKFGENGSGPLIIGGVRIPYEKGLLAHSDGDVALHAATDALLGAAALGDIGKLFPDTDPAFKGADSRGLLREAYRRILAKGYKLGNLDITIIAQAPKMAPHIPQMRVNLAEDLQCHMDDINVKATT 135          
BLAST of BQ623101 vs. ExPASy Swiss-Prot
Match: ISPF_YERPE (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Yersinia pestis GN=ispF PE=1 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 1.264e-31
Identity = 69/134 (51.49%), Postives = 93/134 (69.40%), Query Frame = 3
Query:  246 RVGHGFDLHRL-EPGY-PLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPPGGNLKAKT 641
            R+GHGFD+H+  E G  PLIIGG+ +P+E+G  AHSDGDV LH   DA+LGA  L DIG++FPD+DP +KGA S   ++EA R +   GY++GNLD T+I Q PK++P+   +R NL+E L       N+KA T
Sbjct:    2 RIGHGFDVHKFGENGSGPLIIGGVRIPYEKGLLAHSDGDVALHAATDALLGAAALGDIGKLFPDTDPAFKGADSRGLLREAYRRILAKGYKLGNLDITIIAQAPKMAPHIPQMRVNLAEDLQCHMDDINVKATT 135          
BLAST of BQ623101 vs. ExPASy Swiss-Prot
Match: ISPF_YERPA (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=ispF PE=3 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 1.264e-31
Identity = 69/134 (51.49%), Postives = 93/134 (69.40%), Query Frame = 3
Query:  246 RVGHGFDLHRL-EPGY-PLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPPGGNLKAKT 641
            R+GHGFD+H+  E G  PLIIGG+ +P+E+G  AHSDGDV LH   DA+LGA  L DIG++FPD+DP +KGA S   ++EA R +   GY++GNLD T+I Q PK++P+   +R NL+E L       N+KA T
Sbjct:    2 RIGHGFDVHKFGENGSGPLIIGGVRIPYEKGLLAHSDGDVALHAATDALLGAAALGDIGKLFPDTDPAFKGADSRGLLREAYRRILAKGYKLGNLDITIIAQAPKMAPHIPQMRVNLAEDLQCHMDDINVKATT 135          
BLAST of BQ623101 vs. ExPASy Swiss-Prot
Match: ISPF_YERP3 (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=ispF PE=3 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 1.264e-31
Identity = 69/134 (51.49%), Postives = 93/134 (69.40%), Query Frame = 3
Query:  246 RVGHGFDLHRL-EPGY-PLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPPGGNLKAKT 641
            R+GHGFD+H+  E G  PLIIGG+ +P+E+G  AHSDGDV LH   DA+LGA  L DIG++FPD+DP +KGA S   ++EA R +   GY++GNLD T+I Q PK++P+   +R NL+E L       N+KA T
Sbjct:    2 RIGHGFDVHKFGENGSGPLIIGGVRIPYEKGLLAHSDGDVALHAATDALLGAAALGDIGKLFPDTDPAFKGADSRGLLREAYRRILAKGYKLGNLDITIIAQAPKMAPHIPQMRVNLAEDLQCHMDDINVKATT 135          
BLAST of BQ623101 vs. ExPASy Swiss-Prot
Match: ISPF_VIBVU (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Vibrio vulnificus GN=ispF PE=3 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 1.264e-31
Identity = 64/132 (48.48%), Postives = 89/132 (67.42%), Query Frame = 3
Query:  246 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPPGGNLKAKT 641
            R+GHGFD+H+     P+IIGG+ VP+E+G  AHSDGDV LH + DA+LGA+   DIG+ FPD+D KWKG  S   +K+  R + E GY++GN D T+I Q PK++PY + +R  ++  L  D    N+KA T
Sbjct:    3 RIGHGFDVHKFGGEGPVIIGGVAVPYEQGLIAHSDGDVALHALSDALLGAIAAGDIGRHFPDTDDKWKGVDSRELLKDVYRRVKEQGYKLGNADVTIIAQAPKMAPYIDAMREAIAHDLETDIRNINVKATT 134          
BLAST of BQ623101 vs. ExPASy Swiss-Prot
Match: ISPF_PSEMY (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Pseudomonas mendocina (strain ymp) GN=ispF PE=3 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 1.264e-31
Identity = 62/132 (46.97%), Postives = 93/132 (70.45%), Query Frame = 3
Query:  246 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPPGGNLKAKT 641
            R+GHG+D+HR   G  + +GG+ +PH+ G  AHSDGDVLLH + DA+LGA+ L DIG+ FPD+DP +KGA S   ++  + L+   GY +GN+DAT+I Q PK++P+ +++R  ++E LG +    N+KA T
Sbjct:    2 RIGHGYDVHRFGEGDFITLGGVRIPHKFGLVAHSDGDVLLHALSDALLGAVALGDIGKHFPDTDPTFKGADSRALLRHVMSLVRGKGYAVGNVDATIIAQAPKMAPHIQSMRERIAEDLGVELDQVNVKATT 133          
BLAST of BQ623101 vs. ExPASy Swiss-Prot
Match: ISPF_PHOPR (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Photobacterium profundum GN=ispF PE=3 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 1.264e-31
Identity = 63/132 (47.73%), Postives = 90/132 (68.18%), Query Frame = 3
Query:  246 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPPGGNLKAKT 641
            R+GHGFD+H+     P+IIGG+ +P+E+G  AHSDGDV LH V DA+LGA+G  DIG+ FPD+D +WKGA S   +++    + + GY +GNLD T+I Q PK++PY + +   ++E L  D    N+KA T
Sbjct:    2 RIGHGFDVHKFGGEGPVIIGGVAIPYEQGLIAHSDGDVALHAVCDALLGAIGAGDIGRHFPDTDAEWKGADSRFLLRDVYSKVKDKGYRLGNLDVTIIAQAPKMAPYIDAMCQAIAEDLETDIGNVNVKATT 133          
BLAST of BQ623101 vs. ExPASy Swiss-Prot
Match: ISPF_HAEIN (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Haemophilus influenzae GN=ispF PE=1 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 1.264e-31
Identity = 66/132 (50.00%), Postives = 89/132 (67.42%), Query Frame = 3
Query:  246 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPPGGNLKAKT 641
            R+GHGFD+H      PLIIGG+ VP+  G  AHSDGDV LH + DAILGA  L DIG++FPD+D ++K A S   ++EA R + E GY+IGN+D T+I Q PK+ P+ + +R  ++E L  D    N+KA T
Sbjct:    3 RIGHGFDVHAFGEDRPLIIGGVEVPYHTGFIAHSDGDVALHALTDAILGAAALGDIGKLFPDTDMQYKNADSRGLLREAFRQVQEKGYKIGNVDITIIAQAPKMRPHIDAMRAKIAEDLQCDIEQVNVKATT 134          
BLAST of BQ623101 vs. ExPASy Swiss-Prot
Match: ISPF_HAEIE (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Haemophilus influenzae (strain PittEE) GN=ispF PE=3 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 1.264e-31
Identity = 66/132 (50.00%), Postives = 89/132 (67.42%), Query Frame = 3
Query:  246 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPPGGNLKAKT 641
            R+GHGFD+H      PLIIGG+ VP+  G  AHSDGDV LH + DAILGA  L DIG++FPD+D ++K A S   ++EA R + E GY+IGN+D T+I Q PK+ P+ + +R  ++E L  D    N+KA T
Sbjct:    3 RIGHGFDVHAFGEDRPLIIGGVEVPYHTGFIAHSDGDVALHALTDAILGAAALGDIGKLFPDTDMQYKNADSRGLLREAFRQVQEKGYKIGNVDITIIAQAPKMRPHIDAMRAKIAEDLQCDIEQVNVKATT 134          
BLAST of BQ623101 vs. ExPASy Swiss-Prot
Match: ISPF_EDWI9 (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Edwardsiella ictaluri (strain 93-146) GN=ispF PE=3 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 1.264e-31
Identity = 67/132 (50.76%), Postives = 87/132 (65.91%), Query Frame = 3
Query:  246 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPPGGNLKAKT 641
            R+GHGFD+HR     PLIIGG+ + H +G  AHSDGDV LH   DA+LGA  L DIG++FPD+DP +KGA S   ++EA R +   GY +GNLD TLI Q PK++P+   +R  L+E L       N+KA T
Sbjct:    2 RIGHGFDVHRFGGEGPLIIGGVRIAHPQGLLAHSDGDVALHAATDALLGAAALGDIGKLFPDTDPAYKGADSRALLREAYRSIRARGYRLGNLDITLIAQAPKMAPHIPQMRVFLAEDLQCPIDDVNVKATT 133          
The following BLAST results are available for this feature:
BLAST of BQ623101 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ISPF_YERPG1.264e-3151.492-C-methyl-D-erythritol 2,4-cyclodiphosphate synth... [more]
ISPF_YERPE1.264e-3151.492-C-methyl-D-erythritol 2,4-cyclodiphosphate synth... [more]
ISPF_YERPA1.264e-3151.492-C-methyl-D-erythritol 2,4-cyclodiphosphate synth... [more]
ISPF_YERP31.264e-3151.492-C-methyl-D-erythritol 2,4-cyclodiphosphate synth... [more]
ISPF_VIBVU1.264e-3148.482-C-methyl-D-erythritol 2,4-cyclodiphosphate synth... [more]
ISPF_PSEMY1.264e-3146.972-C-methyl-D-erythritol 2,4-cyclodiphosphate synth... [more]
ISPF_PHOPR1.264e-3147.732-C-methyl-D-erythritol 2,4-cyclodiphosphate synth... [more]
ISPF_HAEIN1.264e-3150.002-C-methyl-D-erythritol 2,4-cyclodiphosphate synth... [more]
ISPF_HAEIE1.264e-3150.002-C-methyl-D-erythritol 2,4-cyclodiphosphate synth... [more]
ISPF_EDWI91.264e-3150.762-C-methyl-D-erythritol 2,4-cyclodiphosphate synth... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00192 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00192 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623101 ID=BQ623101; Name=BQ623101; organism=Citrus sinensis; type=EST; length=646bp
AGATGGTGTTGACGATGGCCGCTCAATCATACACCACCACTCCTCTCCAC
AGCAAAATTACGAATAAGCCACTATGTCCTCCTCCGTTGAGTTTGAAGCC
TCGTAGCTTAACCGCCAAACATCTCCGCACAACACAGTCAACGTCGCTGC
CTCGTATTTCAGTTTCAGCTGCAGCCATTTCTTCCATCGAAGTTAAAGAG
TCATCGGCTTCGATCCAACCGTCCAAATCAAAATCACTGCCTTTTCGTGT
GGGCCACGGGTTTGATCTTCATAGATTGGAGCCTGGCTACCCTCTGATCA
TCGGTGGAATCAATGTTCCCCACGAGAGAGGCTGCGAGGCTCACTCTGAC
GGTGATGTTTTGCTTCACTGTGTTGTGGATGCAATTTTGGGAGCATTGGG
TCTTCCTGATATTGGTCAGATATTTCCTGATTCTGATCCTAAGTGGAAGG
GTGCACCATCCTCTGTTTTTATCAAAGAAGCTGTGAGACTCATGGATGAG
GCCGGCTATGAGATTGGCAACTTGGATGCCACGCTGATTCTTCAAAGACC
AAAATTGAGCCCATACAAGGAGACTATCCGAACCAACTTGTCTGAACTGC
TAGGAGCAGACCCCCCCGGTGGAAATCTGAAAGCGAAAACTCATGA
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