BQ623101

Overview
NameBQ623101
Unique NameBQ623101
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length646
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of BQ623101 vs. ExPASy Swiss-Prot
Match: ISPF_SALA4 (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Salmonella agona (strain SL483) GN=ispF PE=3 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 2.156e-31
Identity = 64/132 (48.48%), Postives = 89/132 (67.42%), Query Frame = 3 
Query:  246 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPPGGNLKAKT 641
            R+GHGFD+H      P+IIGG+ +P+E+G  AHSDGDV LH + DA+LGA  L DIG++FPD+DP +KGA S   ++EA R +   GY +GN+D T+I Q PK+ P+   +R  ++E LG      N+KA T
Sbjct:    2 RIGHGFDVHAFGGEGPIIIGGVRIPYEKGLLAHSDGDVALHALTDALLGAAALGDIGKLFPDTDPAFKGADSRELLREAWRRIQAKGYTLGNVDVTIIAQAPKMLPHIPQMRVFIAEDLGCHMDDVNVKATT 133
[Close]
BLAST of BQ623101 vs. ExPASy Swiss-Prot
Match: ISPF_KLEP7 (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=ispF PE=3 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 2.156e-31
Identity = 64/132 (48.48%), Postives = 89/132 (67.42%), Query Frame = 3 
Query:  246 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPPGGNLKAKT 641
            R+GHGFD+H      P+IIGG+ +P+E+G  AHSDGDV LH + DA+LGA  L DIG++FPD+DP +KGA S   ++EA R +   GY +GN+D T+I Q PK+ P+   +R  ++E LG      N+KA T
Sbjct:    2 RIGHGFDVHAFGGEGPIIIGGVRIPYEKGLLAHSDGDVALHALTDALLGAAALGDIGKLFPDTDPAFKGADSRELLREAWRRIQAKGYTLGNVDVTIIAQAPKMLPHIPQMRVFIAEDLGCHMDDVNVKATT 133
[Close]
BLAST of BQ623101 vs. ExPASy Swiss-Prot
Match: ISPF_KLEP3 (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Klebsiella pneumoniae (strain 342) GN=ispF PE=3 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 2.156e-31
Identity = 64/132 (48.48%), Postives = 89/132 (67.42%), Query Frame = 3 
Query:  246 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPPGGNLKAKT 641
            R+GHGFD+H      P+IIGG+ +P+E+G  AHSDGDV LH + DA+LGA  L DIG++FPD+DP +KGA S   ++EA R +   GY +GN+D T+I Q PK+ P+   +R  ++E LG      N+KA T
Sbjct:    2 RIGHGFDVHAFGGEGPIIIGGVRIPYEKGLLAHSDGDVALHALTDALLGAAALGDIGKLFPDTDPAFKGADSRELLREAWRRIQAKGYTLGNVDVTIIAQAPKMLPHIPQMRVFIAEDLGCHMDDVNVKATT 133
[Close]
BLAST of BQ623101 vs. ExPASy Swiss-Prot
Match: ISPF_HAEIG (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Haemophilus influenzae (strain PittGG) GN=ispF PE=3 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 2.156e-31
Identity = 65/132 (49.24%), Postives = 89/132 (67.42%), Query Frame = 3 
Query:  246 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPPGGNLKAKT 641
            R+GHGFD+H      PLIIGG+ VP+  G  AHSDGDV LH + DAILGA  L DIG++FPD+D ++K A S   ++EA R + E GY+IGN+D T+I Q PK+ P+ + +R  ++E +  D    N+KA T
Sbjct:    3 RIGHGFDVHAFGEDRPLIIGGVEVPYHTGFIAHSDGDVALHALTDAILGAAALGDIGKLFPDTDMQYKNADSRGLLREAFRQVQEKGYKIGNVDITIIAQAPKMRPHIDAMRAKIAEDIQCDIEQVNVKATT 134
[Close]
BLAST of BQ623101 vs. ExPASy Swiss-Prot
Match: ISPF_ESCF3 (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73) GN=ispF PE=3 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 2.156e-31
Identity = 64/132 (48.48%), Postives = 89/132 (67.42%), Query Frame = 3 
Query:  246 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPPGGNLKAKT 641
            R+GHGFD+H      P+IIGG+ +P+E+G  AHSDGDV LH + DA+LGA  L DIG++FPD+DP +KGA S   ++EA R +   GY +GN+D T+I Q PK+ P+   +R  ++E LG      N+KA T
Sbjct:    2 RIGHGFDVHAFGGEGPIIIGGVRIPYEKGLLAHSDGDVALHALTDALLGAAALGDIGKLFPDTDPAFKGADSRELLREAWRRIQAKGYTLGNVDVTIIAQAPKMLPHIPQMRVFIAEDLGCHMDDVNVKATT 133
[Close]
BLAST of BQ623101 vs. ExPASy Swiss-Prot
Match: ISPF_ECOSM (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=ispF PE=3 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 2.156e-31
Identity = 64/132 (48.48%), Postives = 89/132 (67.42%), Query Frame = 3 
Query:  246 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPPGGNLKAKT 641
            R+GHGFD+H      P+IIGG+ +P+E+G  AHSDGDV LH + DA+LGA  L DIG++FPD+DP +KGA S   ++EA R +   GY +GN+D T+I Q PK+ P+   +R  ++E LG      N+KA T
Sbjct:    2 RIGHGFDVHAFGGEGPIIIGGVRIPYEKGLLAHSDGDVALHALTDALLGAAALGDIGKLFPDTDPAFKGADSRELLREAWRRIQAKGYALGNVDVTIIAQAPKMLPHIPQMRVFIAEDLGCHMDDVNVKATT 133
[Close]
BLAST of BQ623101 vs. ExPASy Swiss-Prot
Match: ISPF_ECOSE (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Escherichia coli (strain SE11) GN=ispF PE=3 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 2.156e-31
Identity = 64/132 (48.48%), Postives = 89/132 (67.42%), Query Frame = 3 
Query:  246 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPPGGNLKAKT 641
            R+GHGFD+H      P+IIGG+ +P+E+G  AHSDGDV LH + DA+LGA  L DIG++FPD+DP +KGA S   ++EA R +   GY +GN+D T+I Q PK+ P+   +R  ++E LG      N+KA T
Sbjct:    2 RIGHGFDVHAFGGEGPIIIGGVRIPYEKGLLAHSDGDVALHALTDALLGAAALGDIGKLFPDTDPAFKGADSRELLREAWRRIQAKGYTLGNVDVTIIAQAPKMLPHIPQMRVFIAEDLGCHMDDVNVKATT 133
[Close]
BLAST of BQ623101 vs. ExPASy Swiss-Prot
Match: ISPF_ECOLU (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC) GN=ispF PE=3 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 2.156e-31
Identity = 64/132 (48.48%), Postives = 89/132 (67.42%), Query Frame = 3 
Query:  246 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPPGGNLKAKT 641
            R+GHGFD+H      P+IIGG+ +P+E+G  AHSDGDV LH + DA+LGA  L DIG++FPD+DP +KGA S   ++EA R +   GY +GN+D T+I Q PK+ P+   +R  ++E LG      N+KA T
Sbjct:    2 RIGHGFDVHAFGGEGPIIIGGVRIPYEKGLLAHSDGDVALHALTDALLGAAALGDIGKLFPDTDPAFKGADSRELLREAWRRIQAKGYTLGNVDVTIIAQAPKMLPHIPQMRVFIAEDLGCHMDDVNVKATT 133
[Close]
BLAST of BQ623101 vs. ExPASy Swiss-Prot
Match: ISPF_ECOLI (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Escherichia coli (strain K12) GN=ispF PE=1 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 2.156e-31
Identity = 64/132 (48.48%), Postives = 89/132 (67.42%), Query Frame = 3 
Query:  246 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPPGGNLKAKT 641
            R+GHGFD+H      P+IIGG+ +P+E+G  AHSDGDV LH + DA+LGA  L DIG++FPD+DP +KGA S   ++EA R +   GY +GN+D T+I Q PK+ P+   +R  ++E LG      N+KA T
Sbjct:    2 RIGHGFDVHAFGGEGPIIIGGVRIPYEKGLLAHSDGDVALHALTDALLGAAALGDIGKLFPDTDPAFKGADSRELLREAWRRIQAKGYTLGNVDVTIIAQAPKMLPHIPQMRVFIAEDLGCHMDDVNVKATT 133
[Close]
BLAST of BQ623101 vs. ExPASy Swiss-Prot
Match: ISPF_ECOLC (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) GN=ispF PE=3 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 2.156e-31
Identity = 64/132 (48.48%), Postives = 89/132 (67.42%), Query Frame = 3 
Query:  246 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPPGGNLKAKT 641
            R+GHGFD+H      P+IIGG+ +P+E+G  AHSDGDV LH + DA+LGA  L DIG++FPD+DP +KGA S   ++EA R +   GY +GN+D T+I Q PK+ P+   +R  ++E LG      N+KA T
Sbjct:    2 RIGHGFDVHAFGGEGPIIIGGVRIPYEKGLLAHSDGDVALHALTDALLGAAALGDIGKLFPDTDPAFKGADSRELLREAWRRIQAKGYTLGNVDVTIIAQAPKMLPHIPQMRVFIAEDLGCHMDDVNVKATT 133
The following BLAST results are available for this feature:
BLAST of BQ623101 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ISPF_SALA42.156e-3148.482-C-methyl-D-erythritol 2,4-cyclodiphosphate synth... [more]
ISPF_KLEP72.156e-3148.482-C-methyl-D-erythritol 2,4-cyclodiphosphate synth... [more]
ISPF_KLEP32.156e-3148.482-C-methyl-D-erythritol 2,4-cyclodiphosphate synth... [more]
ISPF_HAEIG2.156e-3149.242-C-methyl-D-erythritol 2,4-cyclodiphosphate synth... [more]
ISPF_ESCF32.156e-3148.482-C-methyl-D-erythritol 2,4-cyclodiphosphate synth... [more]
ISPF_ECOSM2.156e-3148.482-C-methyl-D-erythritol 2,4-cyclodiphosphate synth... [more]
ISPF_ECOSE2.156e-3148.482-C-methyl-D-erythritol 2,4-cyclodiphosphate synth... [more]
ISPF_ECOLU2.156e-3148.482-C-methyl-D-erythritol 2,4-cyclodiphosphate synth... [more]
ISPF_ECOLI2.156e-3148.482-C-methyl-D-erythritol 2,4-cyclodiphosphate synth... [more]
ISPF_ECOLC2.156e-3148.482-C-methyl-D-erythritol 2,4-cyclodiphosphate synth... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00192 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00192 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623101 ID=BQ623101; Name=BQ623101; organism=Citrus sinensis; type=EST; length=646bp
AGATGGTGTTGACGATGGCCGCTCAATCATACACCACCACTCCTCTCCAC
AGCAAAATTACGAATAAGCCACTATGTCCTCCTCCGTTGAGTTTGAAGCC
TCGTAGCTTAACCGCCAAACATCTCCGCACAACACAGTCAACGTCGCTGC
CTCGTATTTCAGTTTCAGCTGCAGCCATTTCTTCCATCGAAGTTAAAGAG
TCATCGGCTTCGATCCAACCGTCCAAATCAAAATCACTGCCTTTTCGTGT
GGGCCACGGGTTTGATCTTCATAGATTGGAGCCTGGCTACCCTCTGATCA
TCGGTGGAATCAATGTTCCCCACGAGAGAGGCTGCGAGGCTCACTCTGAC
GGTGATGTTTTGCTTCACTGTGTTGTGGATGCAATTTTGGGAGCATTGGG
TCTTCCTGATATTGGTCAGATATTTCCTGATTCTGATCCTAAGTGGAAGG
GTGCACCATCCTCTGTTTTTATCAAAGAAGCTGTGAGACTCATGGATGAG
GCCGGCTATGAGATTGGCAACTTGGATGCCACGCTGATTCTTCAAAGACC
AAAATTGAGCCCATACAAGGAGACTATCCGAACCAACTTGTCTGAACTGC
TAGGAGCAGACCCCCCCGGTGGAAATCTGAAAGCGAAAACTCATGA
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