BQ623101

Overview
NameBQ623101
Unique NameBQ623101
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length646
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623101 vs. ExPASy Swiss-Prot
Match: ISPF_AZOVD (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Azotobacter vinelandii (strain DJ / ATCC BAA-1303) GN=ispF PE=3 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 2.815e-31
Identity = 62/132 (46.97%), Postives = 91/132 (68.94%), Query Frame = 3
Query:  246 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPPGGNLKAKT 641
            R+GHG+D+HR   G  + +GG+ +PH  G  AHSDGDVLLH + DA+LGA  L DIG+ FPD+DP++KG  S V ++  V L+ E G+ +GN+DAT++ Q PK++P+ E +R +++E L       N+KA T
Sbjct:    2 RIGHGYDVHRFAEGDFVTLGGVRIPHRFGLLAHSDGDVLLHALCDALLGAAALGDIGRHFPDTDPRFKGVDSRVLLRHVVALVREKGWRVGNVDATIVAQAPKMAPHIERMRLSIAEDLQVGVEQVNVKATT 133          
BLAST of BQ623101 vs. ExPASy Swiss-Prot
Match: ISPF_ANATD (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Anaerocellum thermophilum (strain DSM 6725 / Z-1320) GN=ispF PE=3 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 2.815e-31
Identity = 60/133 (45.11%), Postives = 91/133 (68.42%), Query Frame = 3
Query:  243 FRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPPGGNLKAKT 641
            F+VG G+D+HR   G  LI+GG+ +P E+G   HSD DVL+H ++DAILGA+G  DIG++FPDS P +K   S V +KE  +L++E   +I N+D+T++ QRPK+SPY   ++  +++ L  +    N+K KT
Sbjct:    2 FKVGIGYDVHRFVEGRKLILGGVEIPFEKGLLGHSDADVLVHAIIDAILGAMGENDIGRLFPDSSPNYKDISSLVLLKEVAKLLEEKNMKIVNIDSTVVSQRPKISPYTNEMKNKIADCLKIESTQVNIKGKT 134          
BLAST of BQ623101 vs. ExPASy Swiss-Prot
Match: ISPF_XYLFT (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) GN=ispF PE=3 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 3.677e-31
Identity = 64/135 (47.41%), Postives = 89/135 (65.93%), Query Frame = 3
Query:  237 LPFRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPPGGNLKAKT 641
            L  R+G G+D+H   P   +++GG+ VPH  G  AHSDGDV+LH + DA+LGALGL DIGQ FP SD +WKGA S VF++    L+ E  + +GN+DAT I + PK++PY   +R  ++ LL   P   ++KA T
Sbjct:   13 LNVRIGQGYDVHAFGPSDHVMLGGVRVPHRCGVLAHSDGDVILHALCDAMLGALGLGDIGQHFPPSDVRWKGADSGVFVRHCNLLLRERDWCVGNVDATAICESPKIAPYVNAMREGIARLLEVQPECVSVKATT 147          
BLAST of BQ623101 vs. ExPASy Swiss-Prot
Match: ISPF_SALAR (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980) GN=ispF PE=3 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 3.677e-31
Identity = 64/132 (48.48%), Postives = 89/132 (67.42%), Query Frame = 3
Query:  246 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPPGGNLKAKT 641
            R+GHGFD+H      P+IIGG+ +P+E+G  AHSDGDV LH + DA+LGA  L DIG++FPD+DP +KGA S   ++EA R +   GY +GN+D T+I Q PK+ P+   +R  ++E LG      N+KA T
Sbjct:    2 RIGHGFDVHAFGGEGPIIIGGVRIPYEKGLLAHSDGDVALHALTDALLGAAALGDIGKLFPDTDPAFKGADSRELLREAWRRIQAKGYILGNVDVTIIAQAPKMLPHIPQMRVFIAEDLGCHMDDVNVKATT 133          
BLAST of BQ623101 vs. ExPASy Swiss-Prot
Match: ISPF_HAES1 (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Haemophilus somnus (strain 129Pt) GN=ispF PE=3 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 3.677e-31
Identity = 62/132 (46.97%), Postives = 93/132 (70.45%), Query Frame = 3
Query:  246 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPPGGNLKAKT 641
            R+GHGFD+H      P+IIGG+ +P+E+G  AHSDGDV LH + DA+LGA+ L DIG++FPD+D ++KGA S   ++ A + + + GY++GN+D T+I Q PK+ PY + +RT +++ L  D    N+KA T
Sbjct:    3 RIGHGFDVHAFGGEGPIIIGGVAIPYEKGLVAHSDGDVALHALTDALLGAMALGDIGKLFPDTDIQYKGADSRRLLRTAYQAILDKGYQVGNVDITIIAQAPKMRPYIDAMRTVIAQDLHCDIEQVNVKATT 134          
BLAST of BQ623101 vs. ExPASy Swiss-Prot
Match: ISPF_HAEI8 (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Haemophilus influenzae (strain 86-028NP) GN=ispF PE=3 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 3.677e-31
Identity = 65/132 (49.24%), Postives = 89/132 (67.42%), Query Frame = 3
Query:  246 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPPGGNLKAKT 641
            R+GHGFD+H      PLIIGG+ VP+  G  AHSDGDV LH + DAILGA  L DIG++FPD+D ++K A S   ++EA R + E GY+IGN+D T+I Q PK+ P+ + +R  ++E +  D    N+KA T
Sbjct:    3 RIGHGFDVHAFGEDRPLIIGGVEVPYHTGFIAHSDGDVALHALTDAILGAAALGDIGKLFPDTDMQYKNADSRGLLREAFRQVQEKGYKIGNVDITIIAQAPKMRPHIDAMRAKIAEDILCDIEQVNVKATT 134          
BLAST of BQ623101 vs. ExPASy Swiss-Prot
Match: ISPF_VIBHB (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Vibrio harveyi (strain ATCC BAA-1116 / BB120) GN=ispF PE=3 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 4.802e-31
Identity = 62/132 (46.97%), Postives = 89/132 (67.42%), Query Frame = 3
Query:  246 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPPGGNLKAKT 641
            R+GHGFD+H+     P+IIGG+ +P+E+G  AHSDGDV LH + DA+LGA+   DIG+ FPD+D KWKGA S   +K+  R + E GY +GN D T++ Q PK++P+ + +   ++E L  D    N+KA T
Sbjct:    3 RIGHGFDVHKFGGEGPVIIGGVAIPYEQGLIAHSDGDVALHALTDALLGAIAAGDIGRHFPDTDDKWKGADSRELLKDVYRRVKEQGYRLGNADVTIMAQAPKMAPHIDAMCAAIAEDLETDISNINVKATT 134          
BLAST of BQ623101 vs. ExPASy Swiss-Prot
Match: ISPF_VIBF1 (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Vibrio fischeri (strain ATCC 700601 / ES114) GN=ispF PE=3 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 4.802e-31
Identity = 62/132 (46.97%), Postives = 90/132 (68.18%), Query Frame = 3
Query:  246 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPPGGNLKAKT 641
            R+GHGFD+H+     P+IIGG++VP+E+G  AHSDGDV LH + DA+LGA+   DIG+ FPD+D KWKGA S   +++  R + E G+ +GN D T+I Q PK++PY + +   ++E L  +    N+KA T
Sbjct:    2 RIGHGFDVHKFGGEGPVIIGGVSVPYEQGLIAHSDGDVALHALCDALLGAIAEGDIGRHFPDTDDKWKGADSRALLRDVYRRVKEKGFALGNADVTIIAQAPKMAPYIQAMCNAIAEDLETELDNVNVKATT 133          
BLAST of BQ623101 vs. ExPASy Swiss-Prot
Match: ISPF_PASMU (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Pasteurella multocida GN=ispF PE=3 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 4.802e-31
Identity = 62/132 (46.97%), Postives = 91/132 (68.94%), Query Frame = 3
Query:  246 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPPGGNLKAKT 641
            R+GHGFD+H      P+IIGG+ +P+E+G  AHSDGDV LH + DA+LGA+ L DIG++FPD+D ++KGA S   ++EA   +   GY++GN+D T+I Q PK+ P+ + +R  ++E L  D    N+KA T
Sbjct:    3 RIGHGFDVHAFGGEGPIIIGGVAIPYEKGLLAHSDGDVALHALTDALLGAVALGDIGKLFPDTDMQYKGADSRGLLREAYTQVQAKGYKVGNVDVTIIAQAPKMRPHIDAMRAAIAEDLACDIEQVNVKATT 134          
BLAST of BQ623101 vs. ExPASy Swiss-Prot
Match: ISPF_GEOTN (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Geobacillus thermodenitrificans (strain NG80-2) GN=ispF PE=3 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 4.802e-31
Identity = 63/133 (47.37%), Postives = 91/133 (68.42%), Query Frame = 3
Query:  243 FRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPPGGNLKAKT 641
            FR+G GFD+H+   G PLIIGG+++P+E+G   HSD DVLLH V DA LGA+G  DIG+ FPD+DP++K A S+  +     L+ + GY + N D T+I Q+PK++PY E ++  ++ LL A+    N+KA T
Sbjct:    2 FRIGQGFDVHQFVEGRPLIIGGVHIPYEKGLLGHSDADVLLHAVADACLGAIGAGDIGRHFPDTDPRYKDADSAELLAHVWSLVRQEGYVLVNADCTIIAQKPKMAPYIEEMKKVIARLLEAERSQVNVKATT 134          
The following BLAST results are available for this feature:
BLAST of BQ623101 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ISPF_AZOVD2.815e-3146.972-C-methyl-D-erythritol 2,4-cyclodiphosphate synth... [more]
ISPF_ANATD2.815e-3145.112-C-methyl-D-erythritol 2,4-cyclodiphosphate synth... [more]
ISPF_XYLFT3.677e-3147.412-C-methyl-D-erythritol 2,4-cyclodiphosphate synth... [more]
ISPF_SALAR3.677e-3148.482-C-methyl-D-erythritol 2,4-cyclodiphosphate synth... [more]
ISPF_HAES13.677e-3146.972-C-methyl-D-erythritol 2,4-cyclodiphosphate synth... [more]
ISPF_HAEI83.677e-3149.242-C-methyl-D-erythritol 2,4-cyclodiphosphate synth... [more]
ISPF_VIBHB4.802e-3146.972-C-methyl-D-erythritol 2,4-cyclodiphosphate synth... [more]
ISPF_VIBF14.802e-3146.972-C-methyl-D-erythritol 2,4-cyclodiphosphate synth... [more]
ISPF_PASMU4.802e-3146.972-C-methyl-D-erythritol 2,4-cyclodiphosphate synth... [more]
ISPF_GEOTN4.802e-3147.372-C-methyl-D-erythritol 2,4-cyclodiphosphate synth... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00192 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00192 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623101 ID=BQ623101; Name=BQ623101; organism=Citrus sinensis; type=EST; length=646bp
AGATGGTGTTGACGATGGCCGCTCAATCATACACCACCACTCCTCTCCAC
AGCAAAATTACGAATAAGCCACTATGTCCTCCTCCGTTGAGTTTGAAGCC
TCGTAGCTTAACCGCCAAACATCTCCGCACAACACAGTCAACGTCGCTGC
CTCGTATTTCAGTTTCAGCTGCAGCCATTTCTTCCATCGAAGTTAAAGAG
TCATCGGCTTCGATCCAACCGTCCAAATCAAAATCACTGCCTTTTCGTGT
GGGCCACGGGTTTGATCTTCATAGATTGGAGCCTGGCTACCCTCTGATCA
TCGGTGGAATCAATGTTCCCCACGAGAGAGGCTGCGAGGCTCACTCTGAC
GGTGATGTTTTGCTTCACTGTGTTGTGGATGCAATTTTGGGAGCATTGGG
TCTTCCTGATATTGGTCAGATATTTCCTGATTCTGATCCTAAGTGGAAGG
GTGCACCATCCTCTGTTTTTATCAAAGAAGCTGTGAGACTCATGGATGAG
GCCGGCTATGAGATTGGCAACTTGGATGCCACGCTGATTCTTCAAAGACC
AAAATTGAGCCCATACAAGGAGACTATCCGAACCAACTTGTCTGAACTGC
TAGGAGCAGACCCCCCCGGTGGAAATCTGAAAGCGAAAACTCATGA
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