BQ623101

Overview
NameBQ623101
Unique NameBQ623101
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length646
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig12771 contig Csv1_Contig12771:132..777. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623101 vs. ExPASy Swiss-Prot
Match: ISPF_BACAH (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Bacillus thuringiensis (strain Al Hakam) GN=ispF PE=3 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 2.083e-34
Identity = 68/133 (51.13%), Postives = 92/133 (69.17%), Query Frame = 3
Query:  243 FRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPPGGNLKAKT 641
            FR+G GFD+H    G PLIIGGI +PHE+G   HSD DVLLH + DA LGA+   DIG+ FPD+DP +K A S+V +++    + E GYE+GNLD T+I Q+PK++P+ E++R  +SELL       N+KA T
Sbjct:    2 FRIGQGFDVHEFAEGRPLIIGGITIPHEKGLIGHSDADVLLHTIADACLGAIAAGDIGKHFPDTDPAFKDADSAVLLQKVWEFVREQGYELGNLDCTIIAQKPKMAPHIESMRKRISELLETSIDNINVKATT 134          
BLAST of BQ623101 vs. ExPASy Swiss-Prot
Match: ISPF_BACAC (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Bacillus anthracis (strain CDC 684 / NRRL 3495) GN=ispF PE=3 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 2.083e-34
Identity = 68/133 (51.13%), Postives = 92/133 (69.17%), Query Frame = 3
Query:  243 FRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPPGGNLKAKT 641
            FR+G GFD+H    G PLIIGGI +PHE+G   HSD DVLLH + DA LGA+   DIG+ FPD+DP +K A S+V +++    + E GYE+GNLD T+I Q+PK++P+ E++R  +SELL       N+KA T
Sbjct:    2 FRIGQGFDVHEFAEGRPLIIGGITIPHEKGLIGHSDADVLLHTIADACLGAIAAGDIGKHFPDTDPAFKDADSAVLLQKVWEFVREQGYELGNLDCTIIAQKPKMAPHIESMRKRISELLETSIDNINVKATT 134          
BLAST of BQ623101 vs. ExPASy Swiss-Prot
Match: ISPF_BACAA (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Bacillus anthracis (strain A0248) GN=ispF PE=3 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 2.083e-34
Identity = 68/133 (51.13%), Postives = 92/133 (69.17%), Query Frame = 3
Query:  243 FRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPPGGNLKAKT 641
            FR+G GFD+H    G PLIIGGI +PHE+G   HSD DVLLH + DA LGA+   DIG+ FPD+DP +K A S+V +++    + E GYE+GNLD T+I Q+PK++P+ E++R  +SELL       N+KA T
Sbjct:    2 FRIGQGFDVHEFAEGRPLIIGGITIPHEKGLIGHSDADVLLHTIADACLGAIAAGDIGKHFPDTDPAFKDADSAVLLQKVWEFVREQGYELGNLDCTIIAQKPKMAPHIESMRKRISELLETSIDNINVKATT 134          
BLAST of BQ623101 vs. ExPASy Swiss-Prot
Match: ISPF_RALEH (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=ispF PE=3 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 2.721e-34
Identity = 73/138 (52.90%), Postives = 96/138 (69.57%), Query Frame = 3
Query:  237 LPF--RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPPGGNLKAKTH 644
            +PF  RVG G+D+H L PG  LI+GG+ +PH+RG   HSD D LLH V DA+ GA  L DIG+ FPD+D ++ GA S V ++EA R + EAGYEIGN+DAT+I Q PKL+P+   +  NL+E LG      N+KAKT+
Sbjct:    2 MPFDIRVGQGYDVHALVPGRKLILGGVEIPHDRGLLGHSDADALLHAVTDALFGAAALGDIGRHFPDTDAQFAGADSRVLLREAARRVREAGYEIGNVDATVIAQAPKLAPHIGAMVANLAEDLGIARGRCNVKAKTN 139          
BLAST of BQ623101 vs. ExPASy Swiss-Prot
Match: ISPF_BACC1 (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Bacillus cereus (strain ATCC 10987) GN=ispF PE=3 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 2.721e-34
Identity = 67/133 (50.38%), Postives = 92/133 (69.17%), Query Frame = 3
Query:  243 FRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPPGGNLKAKT 641
            FR+G GFD+H    G PLIIGG+ +PHE+G   HSD DVLLH + DA LGA+   DIG+ FPD+DP +K A S+V +++    + E GYE+GNLD T+I Q+PK++P+ E++R  +SELL       N+KA T
Sbjct:    2 FRIGQGFDVHEFAEGRPLIIGGVTIPHEKGLIGHSDADVLLHTIADACLGAIAAGDIGKHFPDTDPAFKDADSAVLLQKVWEFVREQGYELGNLDCTIIAQKPKMAPHIESMRKRISELLETSIDNINVKATT 134          
BLAST of BQ623101 vs. ExPASy Swiss-Prot
Match: ISPF_BACC4 (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Bacillus cereus (strain B4264) GN=ispF PE=3 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 3.553e-34
Identity = 68/133 (51.13%), Postives = 92/133 (69.17%), Query Frame = 3
Query:  243 FRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPPGGNLKAKT 641
            FR+G GFD+H    G PLIIGGI +PHE+G   HSD DVLLH + DA LGA+   DIG+ FPD+DP +K A S+V +++    + E GYE+GNLD T+I Q+PK++P+ E++R  +SELL       N+KA T
Sbjct:    2 FRIGQGFDVHEFAEGRPLIIGGITIPHEKGLIGHSDADVLLHTIADACLGAIAAGDIGKHFPDTDPAFKDADSAVLLQKVWGFVREQGYELGNLDCTIIAQKPKMAPHIESMRKRISELLETSIDNINVKATT 134          
BLAST of BQ623101 vs. ExPASy Swiss-Prot
Match: ISPF_BORA1 (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Bordetella avium (strain 197N) GN=ispF PE=3 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 4.641e-34
Identity = 70/136 (51.47%), Postives = 94/136 (69.12%), Query Frame = 3
Query:  237 LPFRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPPGGNLKAKTH 644
            +PFRVG GFD+H L  G PLIIGG+ + H  G   HSD DVLLH V DAILGA GL DIG+ FPD+DP++KGA S V ++EA+  +D AG+++ N+DAT+  Q PK+ P+   +  N++  LG      N+KAKT+
Sbjct:    3 IPFRVGQGFDVHALVTGRPLIIGGVRIEHSHGLLGHSDADVLLHAVTDAILGAAGLGDIGRHFPDTDPRFKGADSRVLLREAMARVDAAGWQVVNVDATVHAQAPKIGPHAPAMVANIAADLGIAHDLVNIKAKTN 138          
BLAST of BQ623101 vs. ExPASy Swiss-Prot
Match: ISPF_GEOMG (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) GN=ispF PE=3 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 7.916e-34
Identity = 69/132 (52.27%), Postives = 95/132 (71.97%), Query Frame = 3
Query:  246 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPPGGNLKAKT 641
            R+GHG+D+H L  G  LI+GG++VP+ERG   HSD DVLLH + DAILGAL L DIG+ FPD+DP++KGA S   ++  + L  + GY +GN+DAT++ QRPKL+P+   +R NL+E L A+    N+KA T
Sbjct:    2 RIGHGYDVHCLVEGRKLILGGVDVPYERGLLGHSDADVLLHAIADAILGALALGDIGKHFPDTDPQFKGADSRKLLRHVMALAGQKGYVLGNVDATIVAQRPKLAPFIPEMRANLAEDLIAEIDRINVKATT 133          
BLAST of BQ623101 vs. ExPASy Swiss-Prot
Match: ISPF_THISH (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Thioalkalivibrio sp. (strain HL-EbGR7) GN=ispF PE=3 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 1.034e-33
Identity = 64/132 (48.48%), Postives = 93/132 (70.45%), Query Frame = 3
Query:  246 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPPGGNLKAKT 641
            R+GHG+D+H  + G  +++GG+ +PH +   AHSDGDVL+H + DA+LGA  L DIG+ FPD+DP +KGA S V ++  V L+ E GY +GN+DAT+I Q PK++P+ E +R NL++ LG      N+KA T
Sbjct:    5 RIGHGYDVHAFKAGGHVVLGGVRIPHAKAFAAHSDGDVLIHALCDALLGAAALGDIGRHFPDTDPAYKGADSRVLLRRVVELLHEQGYRVGNVDATIIAQAPKMAPHIEAMRANLADDLGVALECVNVKATT 136          
BLAST of BQ623101 vs. ExPASy Swiss-Prot
Match: ISPF_PELCD (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) GN=ispF PE=3 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 1.034e-33
Identity = 68/132 (51.52%), Postives = 91/132 (68.94%), Query Frame = 3
Query:  246 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPPGGNLKAKT 641
            R+GHG+D+H+L     LI+GG+++PH  G   HSD DVLLH + DAILGALG  DIG+ FPD+DP +KG  S   + E +RL +  GY +GNLDAT+I QRPKL+P+   +R N++E  G D    N+KA T
Sbjct:    3 RIGHGYDVHQLVAERKLILGGVDIPHTLGLLGHSDADVLLHAICDAILGALGEGDIGKHFPDTDPAYKGISSIKLLHEVMRLAETKGYRLGNLDATIIAQRPKLAPFIGNMRENIAEACGTDVSRINVKATT 134          
The following BLAST results are available for this feature:
BLAST of BQ623101 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ISPF_BACAH2.083e-3451.132-C-methyl-D-erythritol 2,4-cyclodiphosphate synth... [more]
ISPF_BACAC2.083e-3451.132-C-methyl-D-erythritol 2,4-cyclodiphosphate synth... [more]
ISPF_BACAA2.083e-3451.132-C-methyl-D-erythritol 2,4-cyclodiphosphate synth... [more]
ISPF_RALEH2.721e-3452.902-C-methyl-D-erythritol 2,4-cyclodiphosphate synth... [more]
ISPF_BACC12.721e-3450.382-C-methyl-D-erythritol 2,4-cyclodiphosphate synth... [more]
ISPF_BACC43.553e-3451.132-C-methyl-D-erythritol 2,4-cyclodiphosphate synth... [more]
ISPF_BORA14.641e-3451.472-C-methyl-D-erythritol 2,4-cyclodiphosphate synth... [more]
ISPF_GEOMG7.916e-3452.272-C-methyl-D-erythritol 2,4-cyclodiphosphate synth... [more]
ISPF_THISH1.034e-3348.482-C-methyl-D-erythritol 2,4-cyclodiphosphate synth... [more]
ISPF_PELCD1.034e-3351.522-C-methyl-D-erythritol 2,4-cyclodiphosphate synth... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00192 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00192 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623101 ID=BQ623101; Name=BQ623101; organism=Citrus sinensis; type=EST; length=646bp
AGATGGTGTTGACGATGGCCGCTCAATCATACACCACCACTCCTCTCCAC
AGCAAAATTACGAATAAGCCACTATGTCCTCCTCCGTTGAGTTTGAAGCC
TCGTAGCTTAACCGCCAAACATCTCCGCACAACACAGTCAACGTCGCTGC
CTCGTATTTCAGTTTCAGCTGCAGCCATTTCTTCCATCGAAGTTAAAGAG
TCATCGGCTTCGATCCAACCGTCCAAATCAAAATCACTGCCTTTTCGTGT
GGGCCACGGGTTTGATCTTCATAGATTGGAGCCTGGCTACCCTCTGATCA
TCGGTGGAATCAATGTTCCCCACGAGAGAGGCTGCGAGGCTCACTCTGAC
GGTGATGTTTTGCTTCACTGTGTTGTGGATGCAATTTTGGGAGCATTGGG
TCTTCCTGATATTGGTCAGATATTTCCTGATTCTGATCCTAAGTGGAAGG
GTGCACCATCCTCTGTTTTTATCAAAGAAGCTGTGAGACTCATGGATGAG
GCCGGCTATGAGATTGGCAACTTGGATGCCACGCTGATTCTTCAAAGACC
AAAATTGAGCCCATACAAGGAGACTATCCGAACCAACTTGTCTGAACTGC
TAGGAGCAGACCCCCCCGGTGGAAATCTGAAAGCGAAAACTCATGA
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