BQ623101
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of BQ623101 vs. ExPASy Swiss-Prot
Match: ISPF_MYCBO (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Mycobacterium bovis GN=ispF PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 2.641e-21 Identity = 50/121 (41.32%), Postives = 71/121 (58.68%), Query Frame = 3 Query: 246 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGA 608 RVG G D+H +EPG P + G+ P GC HSDGDV +H + DA+L A GL DIG++F DP+W+G + ++ V L+ + GY +GN +I RPK+ + + LS LL A Sbjct: 6 RVGLGTDVHPIEPGRPCWLVGLLFPSADGCAGHSDGDVAVHALCDAVLSAAGLGDIGEVFGVDDPRWQGVSGADMLRHVVVLITQHGYRVGNAVVQVIGNRPKIGWRRLEAQAVLSRLLNA 126
BLAST of BQ623101 vs. ExPASy Swiss-Prot
Match: ISPF_RHOSR (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Rhodococcus sp. (strain RHA1) GN=ispF PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 3.450e-21 Identity = 47/121 (38.84%), Postives = 70/121 (57.85%), Query Frame = 3 Query: 246 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGA 608 RVG G D+H +E G P + G+ E GC HSDGDV +H + DA+L A GL D+G +F P+W G + + E RL++E +++ N +I RPK+ P + + LS++LGA Sbjct: 2 RVGIGTDVHPIEQGRPCWMAGLLFEDENGCAGHSDGDVAVHALCDALLSAAGLGDLGSVFGTGRPEWSGVSGAAMLAEVRRLLEEDDFDVANAAVQVIGNRPKIGPRRNEAQKVLSDILGA 122
BLAST of BQ623101 vs. ExPASy Swiss-Prot
Match: ISPF_HYDS0 (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Hydrogenobaculum sp. (strain Y04AAS1) GN=ispF PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 4.505e-21 Identity = 54/133 (40.60%), Postives = 74/133 (55.64%), Query Frame = 3 Query: 243 FRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPPGGNLKAKT 641 +R+G G D H E G L +GG G + HSDGD LLH + DAILGAL DIG +FPD + K S F+ +A+ +M + Y I NLD +I +P +S ++ I +LS LL ++KAKT Sbjct: 2 YRIGIGQDAHYFEKGKKLYLGGEEFDIGYGLKGHSDGDALLHAITDAILGALAKTDIGTLFPDKSKENKNRNSVDFLNKALEIMYDMDYSIVNLDCNIIADKPNISSVRDKIIESLSRLLSIPKDNISIKAKT 134
BLAST of BQ623101 vs. ExPASy Swiss-Prot
Match: ISPF_THEFY (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Thermobifida fusca (strain YX) GN=ispF PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 5.884e-21 Identity = 50/120 (41.67%), Postives = 66/120 (55.00%), Query Frame = 3 Query: 249 VGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGA 608 VG G D+H + G PL + G+ P E G HSDGDV H DA+ A L D+G F SDP+W+GA + EA + + AGYEIGN+ +I RPK +P + LS +GA Sbjct: 2 VGVGTDVHPFQTGRPLFLAGLEWPDEVGLSGHSDGDVAAHAACDALFSACALGDLGSQFGTSDPRWRGASGVALLTEAAQRVRAAGYEIGNIAIQIIGNRPKFAPRRHEAEKVLSAAVGA 121
BLAST of BQ623101 vs. ExPASy Swiss-Prot
Match: ISPF_PSYCK (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Psychrobacter cryohalolentis (strain K5) GN=ispF PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 7.685e-21 Identity = 52/136 (38.24%), Postives = 79/136 (58.09%), Query Frame = 3 Query: 246 RVGHGFDLHRL----EPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPPGGNLKAKT 641 ++G G D+H + +++ G+ + H AHSDGDV+LH + DA+LGAL L DIGQ FPD+D G S V ++ + AGY +GN D T++ +RPKL+P+ +R N++ L D ++KA T Sbjct: 5 KIGQGIDVHAFHNNGQQQQYVVLAGVPIDHTHSLLAHSDGDVVLHALADALLGALALGDIGQHFPDTDAANAGLDSRVLLRYVYGKVLAAGYILGNADITVMCERPKLAPHNLAMRANIASDLQTDVSNISVKATT 140
BLAST of BQ623101 vs. ExPASy Swiss-Prot
Match: ISPF_THEMA (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Thermotoga maritima GN=ispF PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.004e-20 Identity = 51/121 (42.15%), Postives = 75/121 (61.98%), Query Frame = 3 Query: 240 PFRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELL 602 P +G G+D H L G L++ G+ + G HSDGDVL H ++DA+LGA L DIG FP++ ++K A S +KE V++++E G+ + N+DAT++ KLSPY+E I NL L Sbjct: 5 PMFIGFGYDRHPLVEGRRLVLAGVEIDAPLGSLGHSDGDVLSHAIIDALLGAGCLGDIGTWFPET-KEYKDANSLDLLKETVKILEERGFSVVNVDATVVASIVKLSPYREKIVENLKSAL 124
BLAST of BQ623101 vs. ExPASy Swiss-Prot
Match: ISPF_NOCFA (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Nocardia farcinica GN=ispF PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.004e-20 Identity = 49/121 (40.50%), Postives = 68/121 (56.20%), Query Frame = 3 Query: 246 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGA 608 RVG G D+H +EPG P + G+ E GC HSDGDV H + DA+L A GL D+G +F P+W + + E RL+ EAG+E+ N +I RPK+ P + + L +LL A Sbjct: 2 RVGIGSDVHPIEPGRPCWMAGLLFEGEDGCSGHSDGDVAAHALCDALLSAAGLGDVGAVFGTGRPEWADVSGAAMLTEVRRLLGEAGFEVVNAAVQVIGNRPKIGPRRAEAQRVLGDLLDA 122
BLAST of BQ623101 vs. ExPASy Swiss-Prot
Match: ISPF_MYCLE (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Mycobacterium leprae GN=ispF PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.004e-20 Identity = 50/121 (41.32%), Postives = 68/121 (56.20%), Query Frame = 3 Query: 246 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGA 608 RVG GFD+H EPG P + G+ P GC HSDGDV +H + DA+L A G DIG +F DP+W+ + ++ V L+ GYE+ N +I RPK+ P + + LS LL A Sbjct: 6 RVGLGFDVHVFEPGRPCWLVGLLFPDNDGCAGHSDGDVAVHALCDAVLSAAGQGDIGGLFAVGDPRWERVSGADMLRHVVELLLRHGYEVVNASVQVIGNRPKIGPRRTEAQRLLSALLRA 126
BLAST of BQ623101 vs. ExPASy Swiss-Prot
Match: ISPF_MYCLB (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Mycobacterium leprae (strain Br4923) GN=ispF PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.004e-20 Identity = 50/121 (41.32%), Postives = 68/121 (56.20%), Query Frame = 3 Query: 246 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGA 608 RVG GFD+H EPG P + G+ P GC HSDGDV +H + DA+L A G DIG +F DP+W+ + ++ V L+ GYE+ N +I RPK+ P + + LS LL A Sbjct: 6 RVGLGFDVHVFEPGRPCWLVGLLFPDNDGCAGHSDGDVAVHALCDAVLSAAGQGDIGGLFAVGDPRWERVSGADMLRHVVELLLRHGYEVVNASVQVIGNRPKIGPRRTEAQRLLSALLRA 126
BLAST of BQ623101 vs. ExPASy Swiss-Prot
Match: ISPF_NOCSJ (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Nocardioides sp. (strain BAA-499 / JS614) GN=ispF PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 1.712e-20 Identity = 52/122 (42.62%), Postives = 70/122 (57.38%), Query Frame = 3 Query: 246 RVGHGFDLHRLEPGYPLIIGGINVPHE-RGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGA 608 RVG G D+HRL G PL + G++ P E +G E HSD DV H DA+ A GL D+G F +DP W GA + ++E R + AG+EIGN+ +I RP+L + T LS +GA Sbjct: 6 RVGIGTDVHRLVDGVPLHLAGLHWPDEPQGLEGHSDADVAAHAACDALFSAAGLGDLGSNFGTADPAWAGASGAALLEETARRVRAAGFEIGNVAVQVIGNRPRLGGRRAEAETALSAAVGA 127 The following BLAST results are available for this feature:
BLAST of BQ623101 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >BQ623101 ID=BQ623101; Name=BQ623101; organism=Citrus sinensis; type=EST; length=646bpback to top |