BQ623101
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of BQ623101 vs. ExPASy Swiss-Prot
Match: ISPF_THENN (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Thermotoga neapolitana (strain ATCC 49049 / DSM 4359 / NS-E) GN=ispF PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.236e-20 Identity = 50/118 (42.37%), Postives = 74/118 (62.71%), Query Frame = 3 Query: 249 VGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELL 602 +G G+D H L G L++ G+ + G HSDGDVL H ++DA+LGA L DIG FP++ ++K A S +KE V++++E G+ + N+DAT++ KLSPY+E I NL L Sbjct: 8 IGFGYDRHPLVEGRRLVLAGVEIDAPLGSLGHSDGDVLSHAIIDALLGAGCLGDIGTWFPET-KEYKDANSLDLLKETVKILEERGFSVVNVDATVVASIVKLSPYREKILENLKSAL 124
BLAST of BQ623101 vs. ExPASy Swiss-Prot
Match: ISPF_RHOOB (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Rhodococcus opacus (strain B4) GN=ispF PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.236e-20 Identity = 46/121 (38.02%), Postives = 69/121 (57.02%), Query Frame = 3 Query: 246 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGA 608 RVG G D+H +E G P + G+ E GC HSDGDV +H + DA+L A GL D+G +F P+W G + + E RL+++ + + N +I RPK+ P + + LS++LGA Sbjct: 2 RVGIGTDVHPIEQGRPCWMAGLLFEDENGCAGHSDGDVAVHALCDALLSAAGLGDLGSVFGTGRPEWSGVSGAAMLAEVRRLLEQDDFGVANAAVQVIGNRPKIGPRRNEAQKVLSDILGA 122
BLAST of BQ623101 vs. ExPASy Swiss-Prot
Match: ISPF_PLAFX (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Plasmodium falciparum (isolate HB3) GN=ISPF PE=2 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 2.920e-20 Identity = 56/152 (36.84%), Postives = 87/152 (57.24%), Query Frame = 3 Query: 246 RVGHGFDLHR---LEPGY----------------PLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPPGGNLKAKTH 644 R+G G+D+H+ L+ Y L +GG+ + + +HSDGD++ H +VD+ILGALG DIG +FPD D K K S++F++ A L+ + Y+IGN+D +I Q PK+S ++ I N+S +L D ++K KTH Sbjct: 65 RIGQGYDIHKIKVLDEEYNTYANNDFNKNEQSFKTLTLGGVKINNVLVL-SHSDGDIIYHSIVDSILGALGSLDIGTLFPDKDEKNKNKNSAIFLRYARLLIYKKNYDIGNVDINVIAQVPKISNIRKNIIKNISTVLNIDESQISVKGKTH 215
BLAST of BQ623101 vs. ExPASy Swiss-Prot
Match: ISPF_PLAF7 (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Plasmodium falciparum (isolate 3D7) GN=ISPF PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 2.920e-20 Identity = 56/152 (36.84%), Postives = 87/152 (57.24%), Query Frame = 3 Query: 246 RVGHGFDLHR---LEPGY----------------PLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPPGGNLKAKTH 644 R+G G+D+H+ L+ Y L +GG+ + + +HSDGD++ H +VD+ILGALG DIG +FPD D K K S++F++ A L+ + Y+IGN+D +I Q PK+S ++ I N+S +L D ++K KTH Sbjct: 65 RIGQGYDIHKIKVLDEEYNTYANNDFNKNEQSFKTLTLGGVKINNVLVL-SHSDGDIIYHSIVDSILGALGSLDIGTLFPDKDEKNKNKNSAIFLRYARLLIYKKNYDIGNVDINVIAQVPKISNIRKNIIKNISTVLNIDESQISVKGKTH 215
BLAST of BQ623101 vs. ExPASy Swiss-Prot
Match: ISPF_ACIC1 (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) GN=ispF PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 3.814e-20 Identity = 48/121 (39.67%), Postives = 72/121 (59.50%), Query Frame = 3 Query: 246 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGA 608 RVG G D+H P PL + G++ P E G HSD DV++H + +A+L A GL D+G F ++P+W+ A + + E VRL+ +AGY +GN L+ +RPKL + L+E +GA Sbjct: 8 RVGIGVDVHPFSPDRPLWLAGLHWPGEPGLAGHSDADVVIHALCNALLSAAGLGDLGTQFGTAEPEWRDAAGTRLLTETVRLVRDAGYAVGNAAVQLLGERPKLRERRTEAEQLLTETVGA 128
BLAST of BQ623101 vs. ExPASy Swiss-Prot
Match: ISPF_RHOE4 (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Rhodococcus erythropolis (strain PR4 / NBRC 100887) GN=ispF PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 6.506e-20 Identity = 47/121 (38.84%), Postives = 69/121 (57.02%), Query Frame = 3 Query: 246 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGA 608 RVG G D+H +E G P + G+ GC HSDGDV +H + DA+L A GL D+G +F P+W G + + E RL++E + +GN +I RPK+ P + + LS++LGA Sbjct: 2 RVGLGTDVHPIEVGRPCWMAGLLFEEADGCSGHSDGDVAVHALCDALLSAAGLGDLGSVFGTGRPEWDGVSGARMLAEVRRLLEENQFTVGNAAVQVIGNRPKIGPRRGEAQKVLSDILGA 122
BLAST of BQ623101 vs. ExPASy Swiss-Prot
Match: ISPF_PSYA2 (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Psychrobacter arcticus (strain DSM 17307 / 273-4) GN=ispF PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 6.506e-20 Identity = 51/136 (37.50%), Postives = 78/136 (57.35%), Query Frame = 3 Query: 246 RVGHGFDLHRL----EPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPPGGNLKAKT 641 ++G G D+H + +++ G+ + H AHSDGDV+LH + DA+LGAL L DIGQ FPD+D G S V ++ + AGY +GN D T++ +RPKL+ + +R N++ L D ++KA T Sbjct: 5 KIGQGIDVHAFHNNGQQQQYVVLAGVPIEHTHSLLAHSDGDVVLHALADALLGALALGDIGQHFPDTDAANAGLDSRVLLRYVYGKVLAAGYMLGNADITVMCERPKLAVHNLAMRANIASDLQTDVSNISVKATT 140
BLAST of BQ623101 vs. ExPASy Swiss-Prot
Match: ISPF_MYCPA (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Mycobacterium paratuberculosis GN=ispF PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 6.506e-20 Identity = 47/121 (38.84%), Postives = 67/121 (55.37%), Query Frame = 3 Query: 246 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGA 608 R+G G D+H ++PG P + G+ GC HSDGDV H + DA+L A GL D+G +F DP+W G + ++ L G+ +GN +I RPK+ P + + LSELLGA Sbjct: 6 RIGLGVDVHPIQPGRPCRLLGLLFDDADGCAGHSDGDVGAHALCDAVLSAAGLGDVGAVFGVDDPRWAGVSGADMLRHVADLTARHGFRVGNAAVQVIGNRPKVGPRRAEAQRVLSELLGA 126
BLAST of BQ623101 vs. ExPASy Swiss-Prot
Match: ISPF_MYCA9 (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Mycobacterium abscessus (strain ATCC 19977 / DSM 44196) GN=ispF PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 6.506e-20 Identity = 48/121 (39.67%), Postives = 68/121 (56.20%), Query Frame = 3 Query: 246 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGA 608 RVG G D+H +E G P + G+ E GCE HSDGDV H + DA+L A GL D+G +F P+W G + + L+ + G++IGN +I RPK+ P + + LS L+GA Sbjct: 6 RVGIGTDVHPIEEGKPCWLLGLLFSDENGCEGHSDGDVAAHALCDALLSAAGLGDVGAVFGTGRPEWTGVSGAKMLSHVRDLLHDNGFQIGNAAVQVIGNRPKVGPRRAEAQELLSGLIGA 126
BLAST of BQ623101 vs. ExPASy Swiss-Prot
Match: ISPF_MYCA1 (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Mycobacterium avium (strain 104) GN=ispF PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 6.506e-20 Identity = 47/121 (38.84%), Postives = 67/121 (55.37%), Query Frame = 3 Query: 246 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGA 608 R+G G D+H ++PG P + G+ GC HSDGDV H + DA+L A GL D+G +F DP+W G + ++ L G+ +GN +I RPK+ P + + LSELLGA Sbjct: 6 RIGLGVDVHPIQPGRPCRLLGLLFDDADGCAGHSDGDVGAHALCDAVLSAAGLGDVGAVFGVDDPRWAGVSGADMLRHVADLTARHGFRVGNAAVQVIGNRPKVGPRRAEAQRVLSELLGA 126 The following BLAST results are available for this feature:
BLAST of BQ623101 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >BQ623101 ID=BQ623101; Name=BQ623101; organism=Citrus sinensis; type=EST; length=646bpback to top |