BQ623108

Overview
NameBQ623108
Unique NameBQ623108
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length692
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623108 vs. ExPASy Swiss-Prot
Match: VAMP7_PONAB (Vesicle-associated membrane protein 7 OS=Pongo abelii GN=VAMP7 PE=2 SV=3)

HSP 1 Score: 123.635 bits (309), Expect = 9.683e-28
Identity = 60/157 (38.22%), Postives = 97/157 (61.78%), Query Frame = 3
Query:    3 RIIEKLPAESDSRVCFSQDRYIFHILRSDGLTFLCMANDTFGRRIPFSYLEDIQMRFMKNYGRVAHYAPAYAMNDEFSRVLHQQMEFFSSNPSADTLNRVRGEVSEIRTIMVENIEKILERGDRIELLVDKTATMQDGAFHFRKQSKRLRRALWMKN 473
            +I+ K+P+E++ ++ +    Y+FH +  D + +LC+ +D F R   F++L +I+ RF   YG  A  A  YAMN EFS VL  Q++  S N   D +   + +V E++ IMV NI+ + +RG+R+ELL+DKT  + D +  F+  S+ L RA+ MKN
Sbjct:   31 QILAKIPSENN-KLTYPHGNYLFHYICQDRIVYLCITDDDFERSRAFNFLNEIKKRFQTTYGSRAQTALPYAMNSEFSSVLAAQLKHHSENKGLDKVMETQAQVDELKGIMVRNIDLVAQRGERLELLIDKTENLVDSSVTFKTTSRNLARAMCMKN 186          
BLAST of BQ623108 vs. ExPASy Swiss-Prot
Match: VA721_ARATH (Vesicle-associated membrane protein 721 OS=Arabidopsis thaliana GN=VAMP721 PE=2 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 2.637e-25
Identity = 61/157 (38.85%), Postives = 102/157 (64.97%), Query Frame = 3
Query:    9 IEKLPAESDSRVCFSQDRYIFHILRSDGLTFLCMANDTFGRRIPFSYLEDIQMRFMKNYGR-VAHYAPAYAMNDEFSRVLHQQMEFFSSNPSA-DTLNRVRGEVSEIRTIMVENIEKILERGDRIELLVDKTATMQDGAFHFRKQSKRLRRALWMKN 473
            ++KLP+ S+++  ++ D + F+ L  DG T+  +A D+ GR+IP S+LE ++  F K YG   A  A A ++N EF   L + M++   +P     L +V+ +VSE++ +M+ENIEK+L+RG++IELLVDKT  ++  A  FR    ++RR +W++N
Sbjct:   36 LQKLPS-SNNKFTYNCDGHTFNYLVEDGFTYCVVAVDSAGRQIPMSFLERVKEDFNKRYGGGKAATAQANSLNKEFGSKLKEHMQYCMDHPDEISKLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRTTGTQMRRKMWLQN 191          
BLAST of BQ623108 vs. ExPASy Swiss-Prot
Match: VA722_ARATH (Vesicle-associated membrane protein 722 OS=Arabidopsis thaliana GN=VAMP722 PE=2 SV=2)

HSP 1 Score: 114.005 bits (284), Expect = 7.672e-25
Identity = 60/157 (38.22%), Postives = 102/157 (64.97%), Query Frame = 3
Query:    9 IEKLPAESDSRVCFSQDRYIFHILRSDGLTFLCMANDTFGRRIPFSYLEDIQMRFMKNYGR-VAHYAPAYAMNDEFSRVLHQQMEFFSSNPSA-DTLNRVRGEVSEIRTIMVENIEKILERGDRIELLVDKTATMQDGAFHFRKQSKRLRRALWMKN 473
            ++KLP+ S+++  ++ D + F+ L  +G T+  +A D+ GR+IP ++LE ++  F K YG   A  A A ++N EF   L + M++   +P     L +V+ +VSE++ +M+ENIEK+L+RG++IELLVDKT  ++  A  FR Q  ++RR +W +N
Sbjct:   36 LQKLPS-SNNKFTYNCDGHTFNYLVENGFTYCVVAVDSAGRQIPMAFLERVKEDFNKRYGGGKAATAQANSLNKEFGSKLKEHMQYCMDHPDEISKLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRTQGTQMRRKMWFQN 191          
BLAST of BQ623108 vs. ExPASy Swiss-Prot
Match: VA726_ARATH (Putative vesicle-associated membrane protein 726 OS=Arabidopsis thaliana GN=VAMP726 PE=2 SV=2)

HSP 1 Score: 112.849 bits (281), Expect = 1.709e-24
Identity = 57/157 (36.31%), Postives = 103/157 (65.61%), Query Frame = 3
Query:    9 IEKLPAESDSRVCFSQDRYIFHILRSDGLTFLCMANDTFGRRIPFSYLEDIQMRFMKNYGR-VAHYAPAYAMNDEFSRVLHQQMEFFSSNPSA-DTLNRVRGEVSEIRTIMVENIEKILERGDRIELLVDKTATMQDGAFHFRKQSKRLRRALWMKN 473
            ++KLP+ S+++  ++ D + F+ L  +G T+  +  ++ GR+IP ++LE ++  F K YG   A  A A ++N EF   L + M++ + +P     L++V+ +V+E++ +M+ENIEK+L+RG++IELLVDKT  ++  A  FR Q  +++R LW +N
Sbjct:   36 LQKLPS-SNNKFTYNCDGHTFNYLADNGFTYCVVVIESAGRQIPMAFLERVKEDFNKRYGGGKASTAKANSLNKEFGSKLKEHMQYCADHPEEISKLSKVKAQVTEVKGVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRTQGTKMKRKLWFEN 191          
BLAST of BQ623108 vs. ExPASy Swiss-Prot
Match: VAM7A_DICDI (Vesicle-associated membrane protein 7A OS=Dictyostelium discoideum GN=vamp7A PE=1 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 2.915e-24
Identity = 55/157 (35.03%), Postives = 97/157 (61.78%), Query Frame = 3
Query:    3 RIIEKLPAESDSRVCFSQDRYIFHILRSDGLTFLCMANDTFGRRIPFSYLEDIQMRFMKNYGRVAHYAPAYAMNDEFSRVLHQQMEFFSSNPSADTLNRVRGEVSEIRTIMVENIEKILERGDRIELLVDKTATMQDGAFHFRKQSKRLRRALWMKN 473
            R+I K+P  S  +  ++ + + FH +  + L FLC+ ++  G +IP  +L DI+ +F+++YG+        A  D F RVL ++M+++S NP ++ +N V  +VSE +  + + IEK + RG++IE++VDKT  +Q  +F F+  S  L+R LW +N
Sbjct:   34 RLITKIPPTS--KKIYTSENHNFHYISENDLAFLCLCHEKLGVQIPSEFLSDIRQQFIRSYGQSFSQNSPTATYDPFIRVLEERMKYYS-NPKSNKMNLVMDQVSEAKGALTDAIEKTIHRGEKIEIIVDKTERLQSESFVFKSNSVALKRKLWWQN 187          
BLAST of BQ623108 vs. ExPASy Swiss-Prot
Match: VA725_ARATH (Vesicle-associated membrane protein 725 OS=Arabidopsis thaliana GN=VAMP725 PE=2 SV=2)

HSP 1 Score: 111.309 bits (277), Expect = 4.973e-24
Identity = 58/157 (36.94%), Postives = 102/157 (64.97%), Query Frame = 3
Query:    9 IEKLPAESDSRVCFSQDRYIFHILRSDGLTFLCMANDTFGRRIPFSYLEDIQMRFMKNYGR-VAHYAPAYAMNDEFSRVLHQQMEFFSSNPSA-DTLNRVRGEVSEIRTIMVENIEKILERGDRIELLVDKTATMQDGAFHFRKQSKRLRRALWMKN 473
            ++KLP+ S+++  ++ D + F+ L  +G T+  +A ++ GR+IP ++LE ++  F K YG   A  A A ++N EF   L + M++   +P     L +V+ +V+E++ +M+ENIEK+L+RG++IELLVDKT  ++  A  FR Q  ++RR +W +N
Sbjct:  101 LQKLPS-SNNKFTYNCDGHTFNYLVENGFTYCVVAVESVGRQIPMAFLERVKEDFNKRYGGGKATTAQANSLNREFGSKLKEHMQYCVDHPDEISKLAKVKAQVTEVKGVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRTQGTKIRRKMWFEN 256          
BLAST of BQ623108 vs. ExPASy Swiss-Prot
Match: VA727_ARATH (Vesicle-associated membrane protein 727 OS=Arabidopsis thaliana GN=VAMP727 PE=2 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 4.210e-23
Identity = 57/176 (32.39%), Postives = 105/176 (59.66%), Query Frame = 3
Query:    9 IEKLPAESDSRVCFSQDRYIFHILRSDGLTFLCMANDTFGRRIPFSYLEDIQMRFMKNYGRVA--------------------HYAPAYAMNDEFSRVLHQQMEFFSSNPSA-DTLNRVRGEVSEIRTIMVENIEKILERGDRIELLVDKTATMQDGAFHFRKQSKRLRRALWMKN 473
            ++KLP  S S+  +S D + F+ L  +G  FL +A+++ GR +PF +LE ++  F K Y                         ++ AY ++ EF  +L + M++  S+P     L++++ +++E++ IM++NIEK+L+RG++IELLVDKT  +Q  A  F++Q ++LRR +W+++
Sbjct:   36 LQKLPTNS-SKYTYSCDGHTFNFLVDNGFVFLVVADESTGRSVPFVFLERVKEDFKKRYEASIKNDERHPLADEDEDDDLFGDRFSVAYNLDREFGPILKEHMQYCMSHPEEMSKLSKLKAQITEVKGIMMDNIEKVLDRGEKIELLVDKTENLQFQADSFQRQGRQLRRKMWLQS 210          
BLAST of BQ623108 vs. ExPASy Swiss-Prot
Match: VA724_ARATH (Vesicle-associated membrane protein 724 OS=Arabidopsis thaliana GN=VAMP724 PE=2 SV=2)

HSP 1 Score: 106.301 bits (264), Expect = 1.600e-22
Identity = 52/157 (33.12%), Postives = 97/157 (61.78%), Query Frame = 3
Query:    9 IEKLPAESDSRVCFSQDRYIFHILRSDGLTFLCMANDTFGRRIPFSYLEDIQMRFMKNYGR-VAHYAPAYAMNDEFSRVLHQQMEFFSSNPSA-DTLNRVRGEVSEIRTIMVENIEKILERGDRIELLVDKTATMQDGAFHFRKQSKRLRRALWMKN 473
            ++KLP+ S+S+  ++ D + F+ L  DG  +  +A D+  ++I  ++LE ++  F K YG   A  A A ++N EF  V+ + M +   +    + L +V+ +VSE+++IM+ENI+K ++RG+ + +L DKT  ++  A  ++KQ  ++RR LW +N
Sbjct:   36 LQKLPSSSNSKFTYNCDHHTFNFLVEDGYAYCVVAKDSLSKQISIAFLERVKADFKKRYGGGKASTAIAKSLNKEFGPVMKEHMNYIVDHAEEIEKLIKVKAQVSEVKSIMLENIDKAIDRGENLTVLTDKTENLRSQAQEYKKQGTQVRRKLWYQN 192          
BLAST of BQ623108 vs. ExPASy Swiss-Prot
Match: VA723_ARATH (Vesicle-associated membrane protein 723 OS=Arabidopsis thaliana GN=VAMP723 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.474e-15
Identity = 50/157 (31.85%), Postives = 92/157 (58.60%), Query Frame = 3
Query:    9 IEKLPAESDSRVCFSQDRYIFHILRSDGLTFLCMANDTFGRRIPFSYLEDIQMRFMKNY-GRVAHYAPAYAMNDEFSRVLHQQMEFFSSNP-SADTLNRVRGEVSEIRTIMVENIEKILERGDRIELLVDKTATMQDGAFHFRKQSKRLRRALWMKN 473
            +E LP+ S+++  ++ D + F+ L  +G T+  +A D+ GR IP ++LE ++  F K Y G  A    A ++N EF   L + M++   +P     L + + +VSE++++M+ENIEK+L RG   E+L   ++  Q  AF+ ++   +++R  W +N
Sbjct:   36 LENLPS-SNNKFTYNCDGHTFNDLVENGFTYCVVAVDSAGREIPMAFLERVKEDFYKRYGGEKAATDQANSLNKEFGSNLKEHMQYCMDHPDEISNLAKAKAQVSEVKSLMMENIEKVLARGVICEML--GSSESQPQAFYIKR--TQMKRKKWFQN 187          
BLAST of BQ623108 vs. ExPASy Swiss-Prot
Match: SEC22_SCHPO (Protein transport protein sec22 OS=Schizosaccharomyces pombe GN=sec22 PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.228e-14
Identity = 41/156 (26.28%), Postives = 85/156 (54.49%), Query Frame = 3
Query:    6 IIEKLPAESDSRVCFSQDRYIFHILRSDGLTFLCMANDTFGRRIPFSYLEDIQMRFMKNYGRVAHY--APAYAMNDEFSRVLHQQMEFFSSNPSADTLNRVRGEVSEIRTIMVENIEKILERGDRIELLVDKTATMQDGAFHFRKQSKRLR-RALW 464
            I+++L   S+ R       Y FH L  +G+ +LC+   ++ R++ FSYLE++   F  ++G  A       YA   +F   + +    +++  + D L+++  E+ ++  +M +NIE +L RGD +E + D ++ ++  +  ++K ++R+   ALW
Sbjct:   32 ILKRLSPTSEKRASIESGDYTFHYLIDNGICYLCICEQSYPRKLAFSYLEELAGEFWNSFGEEALQPGLRPYAF-VQFDTFMQKSKRVYNTPRANDNLDKLNTELKDVTRVMTKNIEDLLYRGDSLEKMADLSSDLRYSSAKYKKAARRVNLEALW 186          
The following BLAST results are available for this feature:
BLAST of BQ623108 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 24
Match NameE-valueIdentityDescription
VAMP7_PONAB9.683e-2838.22Vesicle-associated membrane protein 7 OS=Pongo abe... [more]
VA721_ARATH2.637e-2538.85Vesicle-associated membrane protein 721 OS=Arabido... [more]
VA722_ARATH7.672e-2538.22Vesicle-associated membrane protein 722 OS=Arabido... [more]
VA726_ARATH1.709e-2436.31Putative vesicle-associated membrane protein 726 O... [more]
VAM7A_DICDI2.915e-2435.03Vesicle-associated membrane protein 7A OS=Dictyost... [more]
VA725_ARATH4.973e-2436.94Vesicle-associated membrane protein 725 OS=Arabido... [more]
VA727_ARATH4.210e-2332.39Vesicle-associated membrane protein 727 OS=Arabido... [more]
VA724_ARATH1.600e-2233.12Vesicle-associated membrane protein 724 OS=Arabido... [more]
VA723_ARATH2.474e-1531.85Vesicle-associated membrane protein 723 OS=Arabido... [more]
SEC22_SCHPO1.228e-1426.28Protein transport protein sec22 OS=Schizosaccharom... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00199 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00199 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623108 ID=BQ623108; Name=BQ623108; organism=Citrus sinensis; type=EST; length=692bp
GACGGATTATTGAGAAACTGCCGGCGGAGTCCGACTCCAGGGTGTGTTTC
TCGCAGGATCGCTACATATTTCACATACTCAGATCCGATGGCCTCACCTT
CCTCTGTATGGCCAACGACACCTTCGGCAGAAGAATTCCATTTTCATATT
TGGAGGATATTCAAATGAGGTTCATGAAAAACTATGGCAGAGTAGCCCAC
TATGCACCTGCTTATGCTATGAATGATGAGTTTTCAAGGGTATTGCATCA
GCAGATGGAATTTTTCTCCAGCAATCCTAGTGCAGATACTCTCAATCGTG
TGAGAGGGGAAGTTAGTGAGATACGCACCATCATGGTGGAGAATATTGAA
AAAATATTGGAGAGAGGTGATAGGATTGAGCTTCTTGTTGACAAAACTGC
AACAATGCAAGACGGCGCATTTCACTTTAGGAAACAGTCTAAGCGCCTTC
GTAGAGCCCTTTGGATGAAAAATGCCAAGCTATTGGCCCTCTTGACAGGC
TTAATTGTTCTGTTGCTGTACATAATAATTGCTGCTGCTTGTGGAGGCAT
CACTTTACCTTCATGCAAATCTTGAGTCGTGGTCGACTGGTGTTAAATTA
CTGCTCGGGTGGGCATTGATGTTGTTTGTTGACAATTATGTGAATTAATC
TTGGAGAGGTTCCCTTGGTTTTGGGGTCAACTATTTAAGGAG
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