BQ623110
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of BQ623110 vs. ExPASy Swiss-Prot
Match: CB22_ARATH (Chlorophyll a-b binding protein 2, chloroplastic OS=Arabidopsis thaliana GN=CAB2A PE=1 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 3.625e-71 Identity = 66/80 (82.50%), Postives = 74/80 (92.50%), Query Frame = 1 Query: 1 TFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACHACAYG 240 TFA+NRELEVIHSRWAMLGALGCVFPE+L++NGVKFGEAVWFKAG+QIFS+GGLDYLGNP+L+HAQSILAIWA G Sbjct: 91 TFARNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMG 170 HSP 2 Score: 144.821 bits (364), Expect = 3.625e-71 Identity = 73/101 (72.28%), Postives = 79/101 (78.22%), Query Frame = 2 Query: 230 VLMGFVEGYRIXXXXXXXXXXXXXXXX-AFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 529 +LMG VEGYR+ +FDPLGLA DP+ FAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENL DH+ADPV NNAWA+ATNFVPGK Sbjct: 167 ILMGAVEGYRVAGNGPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVNNNAWAFATNFVPGK 267
BLAST of BQ623110 vs. ExPASy Swiss-Prot
Match: CB21_ARATH (Chlorophyll a-b binding protein 165/180, chloroplastic OS=Arabidopsis thaliana GN=LHCP-A PE=1 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 3.625e-71 Identity = 66/80 (82.50%), Postives = 74/80 (92.50%), Query Frame = 1 Query: 1 TFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACHACAYG 240 TFA+NRELEVIHSRWAMLGALGCVFPE+L++NGVKFGEAVWFKAG+QIFS+GGLDYLGNP+L+HAQSILAIWA G Sbjct: 91 TFARNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMG 170 HSP 2 Score: 144.821 bits (364), Expect = 3.625e-71 Identity = 73/101 (72.28%), Postives = 79/101 (78.22%), Query Frame = 2 Query: 230 VLMGFVEGYRIXXXXXXXXXXXXXXXX-AFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 529 +LMG VEGYR+ +FDPLGLA DP+ FAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENL DH+ADPV NNAWA+ATNFVPGK Sbjct: 167 ILMGAVEGYRVAGNGPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVNNNAWAFATNFVPGK 267
BLAST of BQ623110 vs. ExPASy Swiss-Prot
Match: CB21_SINAL (Chlorophyll a-b binding protein 1, chloroplastic OS=Sinapis alba GN=CAB1 PE=3 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 1.784e-70 Identity = 66/80 (82.50%), Postives = 73/80 (91.25%), Query Frame = 1 Query: 1 TFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACHACAYG 240 TFA+NRELEVIH RWAMLGALGCVFPE+L++NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+L+HAQSILAIWA G Sbjct: 90 TFARNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMG 169 HSP 2 Score: 143.28 bits (360), Expect = 1.784e-70 Identity = 71/101 (70.30%), Postives = 79/101 (78.22%), Query Frame = 2 Query: 230 VLMGFVEGYRIXXXXXXXXXXXXXXXX-AFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 529 +LMG VEGYR+ +FDPLGLA DP+ FAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV NNAWA+ATNFVPGK Sbjct: 166 ILMGAVEGYRVAGEGPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 266
BLAST of BQ623110 vs. ExPASy Swiss-Prot
Match: CB21_WHEAT (Chlorophyll a-b binding protein, chloroplastic OS=Triticum aestivum GN=WHAB1.6 PE=3 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 5.159e-70 Identity = 65/80 (81.25%), Postives = 73/80 (91.25%), Query Frame = 1 Query: 1 TFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACHACAYG 240 TFAKNRELEVIH RWAMLGALGCVFPE+L++NGVKFGEA WFKAG+QIFS+GGLDYLGNP+L+HAQS+LAIWAC G Sbjct: 91 TFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAGWFKAGSQIFSDGGLDYLGNPSLVHAQSLLAIWACQVVLMG 170 HSP 2 Score: 141.354 bits (355), Expect = 5.159e-70 Identity = 71/100 (71.00%), Postives = 76/100 (76.00%), Query Frame = 2 Query: 230 VLMGFVEGYRIXXXXXXXXXXXXXXXXAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 529 VLMG VEGYRI +FDPLGLA+ P FAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP+E+L DHIADPV NNAW ATNFVPGK Sbjct: 167 VLMGAVEGYRIAGGPLGEIVDPLYPGGSFDPLGLAERPQAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLEDLADHIADPVNNNAWLIATNFVPGK 266
BLAST of BQ623110 vs. ExPASy Swiss-Prot
Match: CB48_MAIZE (Chlorophyll a-b binding protein 48, chloroplastic OS=Zea mays GN=CAB48 PE=3 SV=1) HSP 1 Score: 149.058 bits (375), Expect = 1.248e-68 Identity = 72/100 (72.00%), Postives = 78/100 (78.00%), Query Frame = 2 Query: 230 VLMGFVEGYRIXXXXXXXXXXXXXXXXAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 529 VLMG VEGY + +FDPLGL DDP++FAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPIENL DH+ DPV NNAWAYATNFVPGK Sbjct: 165 VLMGAVEGYHVAGGRLGEVVDPLYLGGSFDPLGLGDDPERFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLTDPVNNNAWAYATNFVPGK 264 HSP 2 Score: 132.494 bits (332), Expect = 1.248e-68 Identity = 60/80 (75.00%), Postives = 68/80 (85.00%), Query Frame = 1 Query: 1 TFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACHACAYG 240 TFAKNRELEVIH RWA+ LGCVFPE+L++NGVKFGE VWFKAG+QIFSEGGL + GNP+L+HAQSILAIWAC G Sbjct: 89 TFAKNRELEVIHCRWAIAVGLGCVFPELLARNGVKFGEGVWFKAGSQIFSEGGLSHPGNPSLVHAQSILAIWACQVVLMG 168
BLAST of BQ623110 vs. ExPASy Swiss-Prot
Match: CB23_HORVU (Chlorophyll a-b binding protein of LHCII type III, chloroplastic OS=Hordeum vulgare GN=LHBC PE=2 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 7.897e-62 Identity = 68/100 (68.00%), Postives = 75/100 (75.00%), Query Frame = 2 Query: 230 VLMGFVEGYRIXXXXXXXXXXXXXXXXA-FDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPG 526 +LMG VEG+RI FDPLGLADDP FAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP+ENL+DH+ DPVANNAW +AT F PG Sbjct: 168 LLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLFDHLDDPVANNAWVFATKFAPG 267 HSP 2 Score: 122.094 bits (305), Expect = 7.897e-62 Identity = 58/71 (81.69%), Postives = 64/71 (90.14%), Query Frame = 1 Query: 4 FAKNRELEVIHSRWAMLGALGCVFPEILSK-NGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAI 213 FA+NR LEVIH RWAMLGALGCVFPE+L K GV+F E VWFKAG+QIFSEGGLDYLGNPNL+HAQSILA+ Sbjct: 92 FARNRALEVIHGRWAMLGALGCVFPEVLQKWVGVEFKEPVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAV 162
BLAST of BQ623110 vs. ExPASy Swiss-Prot
Match: CB22_PINSY (Chlorophyll a-b binding protein type 2 member 2 (Fragment) OS=Pinus sylvestris PE=2 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 1.355e-61 Identity = 76/100 (76.00%), Postives = 81/100 (81.00%), Query Frame = 2 Query: 230 VLMGFVEGYRIXXXXXXXXXXXXXXXXAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 529 VLMG +EGYR+ AFDPLGLADDP+ AELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPIENLYDH+ADPVANNAWAYATNFVPGK Sbjct: 51 VLMGLIEGYRVGGGPLGEGLDPLYPGDAFDPLGLADDPEAKAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHLADPVANNAWAYATNFVPGK 150 HSP 2 Score: 100.908 bits (250), Expect = 1.355e-61 Identity = 47/54 (87.04%), Postives = 48/54 (88.89%), Query Frame = 1 Query: 79 EILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACHACAYG 240 E+L KNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWAC G Sbjct: 1 ELLVKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMG 54
BLAST of BQ623110 vs. ExPASy Swiss-Prot
Match: CB23_SOLLC (Chlorophyll a-b binding protein 13, chloroplastic OS=Solanum lycopersicum GN=CAB13 PE=1 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 5.060e-61 Identity = 70/100 (70.00%), Postives = 75/100 (75.00%), Query Frame = 2 Query: 230 VLMGFVEGYRIXXXXXXXXXXXXXXXXA-FDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPG 526 VLMG VEG+RI FDPLGLADDP FAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ +PVANNAW YAT FVPG Sbjct: 165 VLMGLVEGFRINGLPGVGEGNDLYPGGQYFDPLGLADDPTTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFVPG 264 HSP 2 Score: 117.857 bits (294), Expect = 5.060e-61 Identity = 56/71 (78.87%), Postives = 62/71 (87.32%), Query Frame = 1 Query: 4 FAKNRELEVIHSRWAMLGALGCVFPEILSK-NGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAI 213 FAKNR LEVIH RWAMLGALGC+FPE+L K V F E VWFKAG+QIFS+GGLDYLGNPNL+HAQSILA+ Sbjct: 89 FAKNRALEVIHGRWAMLGALGCIFPEVLEKWVKVDFKEPVWFKAGSQIFSDGGLDYLGNPNLVHAQSILAV 159
BLAST of BQ623110 vs. ExPASy Swiss-Prot
Match: CB2_CHLMO (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Chlamydomonas moewusii PE=2 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 5.012e-58 Identity = 66/98 (67.35%), Postives = 73/98 (74.49%), Query Frame = 2 Query: 230 VLMGFVEGYRIXXXXXXXXXXXXXXXXAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVP 523 VLMG +EGYR+ +FDPLGLADDPD FAELKVKE+KNGRLAMFS FGFFVQAIVTGKGPI+NL DH+ADP NNA+A AT F P Sbjct: 157 VLMGLIEGYRVNGGPAGEGLDPLYPGESFDPLGLADDPDTFAELKVKEIKNGRLAMFSCFGFFVQAIVTGKGPIQNLADHLADPGTNNAFAAATKFTP 254 HSP 2 Score: 111.694 bits (278), Expect = 5.012e-58 Identity = 57/81 (70.37%), Postives = 64/81 (79.01%), Query Frame = 1 Query: 1 TFAKNRELEVIHSRWAMLGALGCVFPEILSKN-GVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACHACAYG 240 TF K RELEVIH+RWA+LGALG + PE+LS GVKFGE VWFKAGAQIFSEGGLDYLG+P LIHAQ+I+A A G Sbjct: 80 TFKKYRELEVIHARWALLGALGILTPELLSTYAGVKFGEPVWFKAGAQIFSEGGLDYLGSPALIHAQNIVATLAVQVVLMG 160
BLAST of BQ623110 vs. ExPASy Swiss-Prot
Match: CB2_MALDO (Chlorophyll a-b binding protein AB10, chloroplastic OS=Malus domestica PE=3 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 2.234e-55 Identity = 62/80 (77.50%), Postives = 66/80 (82.50%), Query Frame = 1 Query: 1 TFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACHACAYG 240 TFAKNRELEVIHSR AM ALGC+FPE+LS G FGEAVWFKAGAQIFSEGGLDYLGNP+L+HAQSILAIW G Sbjct: 94 TFAKNRELEVIHSRCAMSAALGCIFPELLSVMGQGFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWTTKVILMG 173 HSP 2 Score: 108.997 bits (271), Expect = 2.234e-55 Identity = 60/99 (60.61%), Postives = 68/99 (68.69%), Query Frame = 2 Query: 230 VLMGFVEGYRIXXXXXXXXXXXXXXXXAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPG 526 +LMG VEGYRI +FD LGLA+D + FAELKVKELKNGRLAMFSMFGFFVQAIV+ K +ENL DH+ V NNA + TNFVPG Sbjct: 170 ILMGAVEGYRIARGPLGEVTDPLYPG-SFDSLGLAEDTEAFAELKVKELKNGRLAMFSMFGFFVQAIVSRKDRLENLADHLGWTVNNNALSNVTNFVPG 267 The following BLAST results are available for this feature:
BLAST of BQ623110 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 74
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Sequences
The
following sequences are available for this feature:
EST sequence >BQ623110 ID=BQ623110; Name=BQ623110; organism=Citrus sinensis; type=EST; length=623bpback to top |