BQ623112

Overview
NameBQ623112
Unique NameBQ623112
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length689
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8605 contig Csv1_Contig8605:591..1279. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623112 vs. ExPASy Swiss-Prot
Match: CP3A5_HUMAN (Cytochrome P450 3A5 OS=Homo sapiens GN=CYP3A5 PE=1 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 4.776e-19
Identity = 60/209 (28.71%), Postives = 103/209 (49.28%), Query Frame = 3
Query:   12 SDEEIVDFLVALLVAGYETTSTIMTLAVKFLTETPLALAQLKEEHDEIRAKKSKQEPLEWNDYKSMPFTQCVVNETLRVANIISGVFRRAMTDINIKGYTIPKGWRVFASFRAVHLDHDHFKDARSFNPWRWQNNSGATSPVNVFTPFGGGPRLCPGYELARVELSVFLHHLVTRFSWVPAEQDKLVFFSTTR--TQKRYPIIVHVEMK 632
            SD E+    +  + AGYETTS++++  +  L   P    +L++E D +   K+   P  ++    M +   VVNETLR+  +   + R    D+ I G  IPKG  V     A+H D  ++ +   F P R+     +  P  ++TPFG GPR C G   A + + + L  ++  FS+ P ++ ++     T+   Q   PI++ V+ +
Sbjct:  291 SDLELAAQSIIFIFAGYETTSSVLSFTLYELATHPDVQQKLQKEIDAVLPNKA---PPTYDAVVQMEYLDMVVNETLRLFPVAIRLERTCKKDVEINGVFIPKGSMVVIPTYALHHDPKYWTEPEEFRPERFSKKKDSIDPY-IYTPFGTGPRNCIGMRFALMNMKLALIRVLQNFSFKPCKETQIPLKLDTQGLLQPEKPIVLKVDSR 495          
BLAST of BQ623112 vs. ExPASy Swiss-Prot
Match: CP2DI_RAT (Cytochrome P450 2D18 OS=Rattus norvegicus GN=Cyp2d18 PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 4.776e-19
Identity = 63/188 (33.51%), Postives = 98/188 (52.13%), Query Frame = 3
Query:    9 FSDEEIVDFLVALLVAGYETTSTIMTLAVKFLTETPLALAQLKEEHDEIRAKKSKQEPLEWNDYKSMPFTQCVVNETLRVANIIS-GVFRRAMTDINIKGYTIPKGWRVFASFRAVHLDHDHFKDARSFNPWRWQNNSGATSPVNVFTPFGGGPRLCPGYELARVELSVFLHHLVTRFSW-VPAEQDK 566
            F+DE +   +  L +AG  TTST +T A+ F+   P    ++++E DE+  +  + E     D   MPFT  V++E  R A+I+  GV  +   DI ++G+ IPKG  +  +  +V  D   ++    F+P  + +  G       F PF  G R C G  LAR+EL +F   L+ RFS+ VPA Q +
Sbjct:  293 FNDENLRVVVADLFMAGMVTTSTTLTWALLFMILRPDVQCRVQQEIDEVIGQVRRPEMA---DQARMPFTNAVIHEVQRFADILPLGVPHKTSRDIEVQGFLIPKGTTLIINLSSVLKDETVWEKPLRFHPEHFLDAQGNFVKHEAFMPFSAGRRACLGEPLARMELFLFFTCLLQRFSFSVPAGQPR 477          
BLAST of BQ623112 vs. ExPASy Swiss-Prot
Match: CP17A_ORYLA (Steroid 17-alpha-hydroxylase/17,20 lyase OS=Oryzias latipes GN=cyp17a1 PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 4.776e-19
Identity = 59/189 (31.22%), Postives = 102/189 (53.97%), Query Frame = 3
Query:    6 GFSDEEIVDFLVALLVAGYETTSTIMTLAVKFLTETPLALAQLKEEHDEIRAKKSKQEPLEWNDYKSMPFTQCVVNETLRVANIISGVFRR-AMTDINIKGYTIPKGWRVFASFRAVHLDHDHFKDARSFNPWRWQNNSGA--TSPVNVFTPFGGGPRLCPGYELARVELSVFLHHLVTRFSW-VPAEQ 560
            G SD+ ++  +  +  AG ETT+T++  A+ +L   P    Q++EE D    K     P + +D  S+PF +  + E LR+  +   +    A++D ++  +T+ KG RV  +  ++H D   + +   FNP R+ +  G+  T P + + PFG G R+C G  LA++EL +FL  ++ RF+  VP  Q
Sbjct:  295 GLSDDHLLMTVGDIFGAGVETTTTVLKWAITYLIHYPEVQKQIQEELDR---KVGVDRPPQLSDRGSLPFLEATIREVLRIRPVAPLLIPHVALSDTSLGDFTVRKGTRVVINLWSLHHDEKEWTNPDLFNPGRFLSADGSSLTLPSSSYLPFGAGLRVCLGEALAKMELFLFLSWILQRFTLSVPPSQ 480          
BLAST of BQ623112 vs. ExPASy Swiss-Prot
Match: CP3A4_HUMAN (Cytochrome P450 3A4 OS=Homo sapiens GN=CYP3A4 PE=1 SV=4)

HSP 1 Score: 94.3597 bits (233), Expect = 6.237e-19
Identity = 61/209 (29.19%), Postives = 102/209 (48.80%), Query Frame = 3
Query:   12 SDEEIVDFLVALLVAGYETTSTIMTLAVKFLTETPLALAQLKEEHDEIRAKKSKQEPLEWNDYKSMPFTQCVVNETLRVANIISGVFRRAMTDINIKGYTIPKGWRVFASFRAVHLDHDHFKDARSFNPWRWQNNSGATSPVNVFTPFGGGPRLCPGYELARVELSVFLHHLVTRFSWVPAEQDKLVFFSTT--RTQKRYPIIVHVEMK 632
            SD E+V   +  + AGYETTS++++  +  L   P    +L+EE D +   K+   P  ++    M +   VVNETLR+  I   + R    D+ I G  IPKG  V     A+H D  ++ +   F P R+   +       ++TPFG GPR C G   A + + + L  ++  FS+ P ++ ++    +     Q   P+++ VE +
Sbjct:  291 SDLELVAQSIIFIFAGYETTSSVLSFIMYELATHPDVQQKLQEEIDAVLPNKA---PPTYDTVLQMEYLDMVVNETLRLFPIAMRLERVCKKDVEINGMFIPKGVVVMIPSYALHRDPKYWTEPEKFLPERFSKKNKDNIDPYIYTPFGSGPRNCIGMRFALMNMKLALIRVLQNFSFKPCKETQIPLKLSLGGLLQPEKPVVLKVESR 496          
BLAST of BQ623112 vs. ExPASy Swiss-Prot
Match: CP3A2_RAT (Cytochrome P450 3A2 OS=Rattus norvegicus GN=Cyp3a2 PE=1 SV=2)

HSP 1 Score: 93.9745 bits (232), Expect = 8.146e-19
Identity = 62/187 (33.16%), Postives = 96/187 (51.34%), Query Frame = 3
Query:   12 SDEEIVDFLVALLVAGYETTSTIMTLAVKFLTETPLALAQLKEEHDEIRAKKSKQEPLEWNDYKSMPFTQCVVNETLRVANIISGVFRRAMTDINIKGYTIPKGWRVFASFRAVHLDHDHFKDARSFNPWRW-QNNSGATSPVNVFTPFGGGPRLCPGYELARVELSVFLHHLVTRFSWVPAEQDKL 569
            SD EI+   V  + AGYETTS+ ++  + FL   P    +L+EE D     K+   P  ++    M +   V+NETLR+  I + + R    DI + G  IPKG  V     A+H D  H+     F+P R+ + N G+  P  V+ PFG GPR C G   A + + + L  ++  FS+ P ++ ++
Sbjct:  292 SDVEIIAQSVIFIFAGYETTSSTLSFVLYFLATHPDIQKKLQEEIDGALPSKA---PPTYDIVMEMEYLDMVLNETLRLYPIGNRLERVCKKDIELDGLFIPKGSVVTIPTYALHHDPQHWPKPEEFHPERFSKENKGSIDPY-VYLPFGNGPRNCIGMRFALMNMKLALTKVLQNFSFQPCKETQI 474          
BLAST of BQ623112 vs. ExPASy Swiss-Prot
Match: CP343_HUMAN (Cytochrome P450 3A43 OS=Homo sapiens GN=CYP3A43 PE=1 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 8.146e-19
Identity = 61/209 (29.19%), Postives = 101/209 (48.33%), Query Frame = 3
Query:   12 SDEEIVDFLVALLVAGYETTSTIMTLAVKFLTETPLALAQLKEEHDEIRAKKSKQEPLEWNDYKSMPFTQCVVNETLRVANIISGVFRRAMTDINIKGYTIPKGWRVFASFRAVHLDHDHFKDARSFNPWRWQNNSGATSPVNVFTPFGGGPRLCPGYELARVELSVFLHHLVTRFSWVPAEQDK--LVFFSTTRTQKRYPIIVHVEMK 632
            SD E+V   + ++ A Y+TTST +   +  L   P    +L+EE D +   K+   P+ ++    M +   VVNETLR+  ++S V R    DI I G  IPKG  V     A+H D  ++ +   F P R+   +  +  +  + PFG GPR C G   A   + + +   +  FS+ P ++ +  L   +    Q   PI++ V ++
Sbjct:  291 SDLELVAQSIIIIFAAYDTTSTTLPFIMYELATHPDVQQKLQEEIDAVLPNKA---PVTYDALVQMEYLDMVVNETLRLFPVVSRVTRVCKKDIEINGVFIPKGLAVMVPIYALHHDPKYWTEPEKFCPERFSKKNKDSIDLYRYIPFGAGPRNCIGMRFALTNIKLAVIRALQNFSFKPCKETQIPLKLDNLPILQPEKPIVLKVHLR 496          
BLAST of BQ623112 vs. ExPASy Swiss-Prot
Match: CP2F2_MOUSE (Cytochrome P450 2F2 OS=Mus musculus GN=Cyp2f2 PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 8.146e-19
Identity = 58/170 (34.12%), Postives = 86/170 (50.59%), Query Frame = 3
Query:   45 LLVAGYETTSTIMTLAVKFLTETPLALAQLKEEHDEIRAKKSKQEPLEWNDYKSMPFTQCVVNETLRVANIIS-GVFRRAMTDINIKGYTIPKGWRVFASFRAVHLDHDHFKDARSFNPWRWQNNSGATSPVNVFTPFGGGPRLCPGYELARVELSVFLHHLVTRFSWVP 551
            LL  G ET  T +  A   L + P   A+++EE D +   +S+   LE  D  SMP+T  V++E  R A++I   +  R   D   +G+ IPKG  V      VH D D FK  + FNP  + +++ +      F PF  G RLC G  LAR+EL ++   ++  F+  P
Sbjct:  295 LLFGGTETVGTTLRHAFLILMKYPKVQARVQEEIDRV-VGRSRMPTLE--DRTSMPYTDAVIHEVQRFADVIPMNLPHRVTRDTPFRGFLIPKGTDVITLLNTVHYDSDQFKTPQEFNPEHFLDDNHSFKKSPAFMPFSAGRRLCLGEPLARMELFIYFTSILQNFTLQP 461          
BLAST of BQ623112 vs. ExPASy Swiss-Prot
Match: CP2J3_RAT (Cytochrome P450 2J3 OS=Rattus norvegicus GN=Cyp2j3 PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.389e-18
Identity = 60/188 (31.91%), Postives = 95/188 (50.53%), Query Frame = 3
Query:    9 FSDEEIVDFLVALLVAGYETTSTIMTLAVKFLTETPLALAQLKEEHDEIRAKKSKQEPLEWNDYKSMPFTQCVVNETLRVANIIS-GVFRRAMTDINIKGYTIPKGWRVFASFRAVHLDHDHFKDARSFNPWRWQNNSGATSPVNVFTPFGGGPRLCPGYELARVELSVFLHHLVTRFSWVPAEQDKL 569
            F++E ++   + L  AG ETTST +  A+  +   P    +++ E D +  +  +Q  L   D  SMP+T  V++E  R+ NII   V R    D  + G+ +PKG  +  +  A+H D   +    +FNP  +  N G       F PF  G R C G +LAR EL +F+  L+ +F++ P   +KL
Sbjct:  296 FNEENLICSTLDLFFAGTETTSTTLRWALLCMALYPEVQEKMQAEIDRVIGQ-GRQPNLA--DRDSMPYTNAVIHEVQRIGNIIPFNVPREVAVDTYLAGFNLPKGTMILTNLTALHRDPKEWATPDTFNPEHFLEN-GQFKKRESFLPFSMGKRACLGEQLARSELFIFITSLIQKFTFKPPVNEKL 479          
BLAST of BQ623112 vs. ExPASy Swiss-Prot
Match: CP2F2_RAT (Cytochrome P450 2F2 OS=Rattus norvegicus GN=Cyp2f2 PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.389e-18
Identity = 59/170 (34.71%), Postives = 87/170 (51.18%), Query Frame = 3
Query:   45 LLVAGYETTSTIMTLAVKFLTETPLALAQLKEEHDEIRAKKSKQEPLEWNDYKSMPFTQCVVNETLRVANIIS-GVFRRAMTDINIKGYTIPKGWRVFASFRAVHLDHDHFKDARSFNPWRWQNNSGATSPVNVFTPFGGGPRLCPGYELARVELSVFLHHLVTRFSWVP 551
            LL  G ET  T +  A   L + P   A+++EE D +   +S+   LE  D  SMP+T  V++E  R A++I   +  R + D   +G+ IPKG  V      VH D D FK  + FNP  + + + +      F PF  G RLC G  LAR+EL ++L  ++  F+  P
Sbjct:  295 LLFGGTETVGTTLRHAFLILMKYPKVQARVQEEIDCV-VGRSRMPTLE--DRASMPYTDAVIHEVQRFADVIPMNLPHRVIRDTPFRGFLIPKGTDVITLLNTVHYDSDQFKTPQEFNPEHFLDANQSFKKSPAFMPFSAGRRLCLGEPLARMELFIYLTSILQNFTLHP 461          
BLAST of BQ623112 vs. ExPASy Swiss-Prot
Match: CP2D4_RAT (Cytochrome P450 2D4 OS=Rattus norvegicus GN=Cyp2d4 PE=2 SV=2)

HSP 1 Score: 93.2041 bits (230), Expect = 1.389e-18
Identity = 62/188 (32.98%), Postives = 97/188 (51.60%), Query Frame = 3
Query:    9 FSDEEIVDFLVALLVAGYETTSTIMTLAVKFLTETPLALAQLKEEHDEIRAKKSKQEPLEWNDYKSMPFTQCVVNETLRVANIIS-GVFRRAMTDINIKGYTIPKGWRVFASFRAVHLDHDHFKDARSFNPWRWQNNSGATSPVNVFTPFGGGPRLCPGYELARVELSVFLHHLVTRFSW-VPAEQDK 566
            F+DE +   +  L +AG  TTST +T A+ F+   P    ++++E DE+  +  + E     D   MPFT  V++E  R A+I+  GV  +   DI ++G+ IPKG  +  +  +V  D   ++    F+P  + +  G       F PF  G R C G  LAR+EL +F   L+ RFS+ VP  Q +
Sbjct:  293 FNDENLRVVVADLFMAGMVTTSTTLTWALLFMILHPDVQCRVQQEIDEVIGQVRRPEMA---DQARMPFTNAVIHEVQRFADILPLGVPHKTSRDIEVQGFLIPKGTTLITNLSSVLKDETVWEKPLRFHPEHFLDAQGNFVKHEAFMPFSAGRRACLGEPLARMELFLFFTCLLQRFSFSVPTGQPR 477          
The following BLAST results are available for this feature:
BLAST of BQ623112 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 422
Match NameE-valueIdentityDescription
CP3A5_HUMAN4.776e-1928.71Cytochrome P450 3A5 OS=Homo sapiens GN=CYP3A5 PE=1... [more]
CP2DI_RAT4.776e-1933.51Cytochrome P450 2D18 OS=Rattus norvegicus GN=Cyp2d... [more]
CP17A_ORYLA4.776e-1931.22Steroid 17-alpha-hydroxylase/17,20 lyase OS=Oryzia... [more]
CP3A4_HUMAN6.237e-1929.19Cytochrome P450 3A4 OS=Homo sapiens GN=CYP3A4 PE=1... [more]
CP3A2_RAT8.146e-1933.16Cytochrome P450 3A2 OS=Rattus norvegicus GN=Cyp3a2... [more]
CP343_HUMAN8.146e-1929.19Cytochrome P450 3A43 OS=Homo sapiens GN=CYP3A43 PE... [more]
CP2F2_MOUSE8.146e-1934.12Cytochrome P450 2F2 OS=Mus musculus GN=Cyp2f2 PE=2... [more]
CP2J3_RAT1.389e-1831.91Cytochrome P450 2J3 OS=Rattus norvegicus GN=Cyp2j3... [more]
CP2F2_RAT1.389e-1834.71Cytochrome P450 2F2 OS=Rattus norvegicus GN=Cyp2f2... [more]
CP2D4_RAT1.389e-1832.98Cytochrome P450 2D4 OS=Rattus norvegicus GN=Cyp2d4... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00203 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00203 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623112 ID=BQ623112; Name=BQ623112; organism=Citrus sinensis; type=EST; length=689bp
ACGATGGCTTTTCCGATGAGGAGATCGTTGATTTCTTGGTGGCTTTGTTG
GTGGCTGGCTATGAAACAACGTCCACCATCATGACTCTTGCTGTTAAGTT
CCTCACTGAGACTCCTCTCGCTTTGGCTCAACTAAAGGAGGAGCATGATG
AGATAAGGGCAAAGAAGAGCAAGCAAGAGCCTCTCGAATGGAATGATTAT
AAGTCAATGCCGTTCACTCAATGTGTTGTCAATGAAACTCTGAGAGTGGC
CAACATAATCAGTGGGGTTTTTAGAAGAGCAATGACAGATATCAACATCA
AAGGTTACACTATACCGAAGGGGTGGAGAGTTTTTGCATCATTCAGGGCT
GTACATTTAGACCATGACCATTTCAAAGATGCTCGCTCTTTCAACCCATG
GAGATGGCAGAATAATTCAGGAGCAACGAGTCCAGTAAATGTATTCACTC
CGTTCGGCGGTGGGCCACGGCTGTGCCCTGGATATGAACTTGCGAGGGTT
GAGCTCTCTGTTTTTCTTCACCACTTAGTTACTCGTTTCAGCTGGGTACC
AGCTGAACAAGATAAGTTGGTATTCTTTTCAACAACAAGAACCCAGAAGA
GGTACCCCATCATTGTGCACGTCGAAATGAAAGTTAAAGCCCTGTAAAGA
ATAAAGGAGAACCAGCAGGGTGGAGTAAGAAATGCTAAA
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