BQ623112

Overview
NameBQ623112
Unique NameBQ623112
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length689
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8605 contig Csv1_Contig8605:591..1279. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623112 vs. ExPASy Swiss-Prot
Match: CP2C8_HUMAN (Cytochrome P450 2C8 OS=Homo sapiens GN=CYP2C8 PE=1 SV=2)

HSP 1 Score: 93.2041 bits (230), Expect = 1.389e-18
Identity = 58/179 (32.40%), Postives = 92/179 (51.40%), Query Frame = 3
Query:    9 FSDEEIVDFLVALLVAGYETTSTIMTLAVKFLTETPLALAQLKEEHDEIRAKKSKQEPLEWNDYKSMPFTQCVVNETLRVANII-SGVFRRAMTDINIKGYTIPKGWRVFASFRAVHLDHDHFKDARSFNPWRWQNNSGATSPVNVFTPFGGGPRLCPGYELARVELSVFLHHLVTRFS 542
            F+ E +V  +  L VAG ETTST +   +  L + P   A+++EE D +  +   + P    D   MP+T  VV+E  R ++++ +GV     TD   + Y IPKG  + A   +V  D   F +   F+P  + + +G     + F PF  G R+C G  LAR+EL +FL  ++  F+
Sbjct:  282 FNIENLVGTVADLFVAGTETTSTTLRYGLLLLLKHPEVTAKVQEEIDHVIGRH--RSPC-MQDRSHMPYTDAVVHEIQRYSDLVPTGVPHAVTTDTKFRNYLIPKGTTIMALLTSVLHDDKEFPNPNIFDPGHFLDKNGNFKKSDYFMPFSAGKRICAGEGLARMELFLFLTTILQNFN 457          
BLAST of BQ623112 vs. ExPASy Swiss-Prot
Match: CP3AV_MESAU (Cytochrome P450 3A31 OS=Mesocricetus auratus GN=CYP3A31 PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.815e-18
Identity = 62/207 (29.95%), Postives = 103/207 (49.76%), Query Frame = 3
Query:   12 SDEEIVDFLVALLVAGYETTSTIMTLAVKFLTETPLALAQLKEEHDEIRAKKSKQEPLEWNDYKSMPFTQCVVNETLRVANIISGVFRRAMTDINIKGYTIPKGWRVFASFRAVHLDHDHFKDARSFNPWRW-QNNSGATSPVNVFTPFGGGPRLCPGYELARVELSVFLHHLVTRFSWVPAEQDKLVFFSTTRT--QKRYPIIVHV 623
            SD EI+   +  + AGY+TTS+ ++ A+  L   P    +L+EE D     K++     ++    M +   V+NETLR+  I S + R    D+ + G  +PKG  V     A+H D  ++ +   F P R+ + N G+  P  +F PFG GPR C G   A + + + L  ++  FS  P ++ ++    + +   Q   PII+ V
Sbjct:  289 SDMEIIAQSIIFIFAGYDTTSSTLSFALYLLATHPDVQKKLQEEIDIALPNKARPS---YDKVMEMEYLDMVLNETLRLYPIGSRLERVCKQDVEMDGVFVPKGSIVMVPVFALHYDPQYWPEPEKFRPERFSKENKGSIDPY-IFLPFGNGPRNCIGMRFALMNMKLALTKVLQNFSLQPCKETQIPMKLSRKAMLQPEKPIILKV 491          
BLAST of BQ623112 vs. ExPASy Swiss-Prot
Match: CP26A_MOUSE (Cytochrome P450 26A1 OS=Mus musculus GN=Cyp26a1 PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.815e-18
Identity = 55/169 (32.54%), Postives = 81/169 (47.93%), Query Frame = 3
Query:   45 LLVAGYETTSTIMTLAVKFLTETPLALAQLKEEHDE--IRAKKSKQEPLEWNDYKSMPFTQCVVNETLRVANIISGVFRRAMTDINIKGYTIPKGWRVFASFRAVHLDHDHFKDARSFNPWRWQNNSGATSPVNVFTPFGGGPRLCPGYELARVELSVFLHHLVTRFSW 545
            LL  G+ETT++  T  + +L   P  L +++EE     +  K ++   L+    + + +  CV+ ETLR+   + G FR A+    + GY IPKGW V  S    H   D F +   FNP R+       +    F PFGGG R C G E A++ L +F   L     W
Sbjct:  297 LLFGGHETTASAATSLITYLGLYPHVLQKVREEIKSKGLLCKSNQDNKLDMETLEQLKYIGCVIKETLRLNPPVPGGFRVALKTFELNGYQIPKGWNVIYSICDTHDVADIFTNKEEFNPDRFIVPHPEDASRFSFIPFGGGLRSCVGKEFAKILLKIFTVELARHCDW 465          
BLAST of BQ623112 vs. ExPASy Swiss-Prot
Match: CP341_MOUSE (Cytochrome P450 3A41 OS=Mus musculus GN=Cyp3a41a PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.370e-18
Identity = 59/187 (31.55%), Postives = 95/187 (50.80%), Query Frame = 3
Query:   12 SDEEIVDFLVALLVAGYETTSTIMTLAVKFLTETPLALAQLKEEHDEIRAKKSKQEPLEWNDYKSMPFTQCVVNETLRVANIISGVFRRAMTDINIKGYTIPKGWRVFASFRAVHLDHDHFKDARSFNPWRW-QNNSGATSPVNVFTPFGGGPRLCPGYELARVELSVFLHHLVTRFSWVPAEQDKL 569
            SD EI    +  + AGYETTS+ ++  +  L   P    +L+EE DE    K+   P  ++    M +   V+NETLR+  I + + R    D+ + G  IPKG  V     A+H D  H+ +   F P R+ + N G+  P  ++ PFG GPR C G   A + + + L  ++  FS+ P ++ ++
Sbjct:  292 SDMEITAQSIVFIFAGYETTSSTLSFTLYCLATHPDIQKKLQEEIDETLPNKA---PPTYDTVMEMEYLDMVLNETLRLYPIGNRLERFCKKDVELNGVYIPKGSTVMIPSYALHHDPQHWPEPEEFQPERFSKENKGSIDPY-LYMPFGIGPRNCIGMRFAFMTMKLALTKVMQNFSFQPCQETQI 474          
BLAST of BQ623112 vs. ExPASy Swiss-Prot
Match: CP2CK_MACFA (Cytochrome P450 2C20 OS=Macaca fascicularis GN=CYP2C20 PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.370e-18
Identity = 57/179 (31.84%), Postives = 92/179 (51.40%), Query Frame = 3
Query:    9 FSDEEIVDFLVALLVAGYETTSTIMTLAVKFLTETPLALAQLKEEHDEIRAKKSKQEPLEWNDYKSMPFTQCVVNETLRVANII-SGVFRRAMTDINIKGYTIPKGWRVFASFRAVHLDHDHFKDARSFNPWRWQNNSGATSPVNVFTPFGGGPRLCPGYELARVELSVFLHHLVTRFS 542
            F+ E +V  +  L VAG ETTST +   +  L + P   A+++EE D +  +   + P    D   MP+T  V++E  R  +++ +GV     TDI  + Y IPKG  +     +V  D   F + + F+P  + + +G     + F PF  G R+C G  LAR+EL +FL  ++  F+
Sbjct:  282 FTIENLVGTVADLFVAGTETTSTTLRYGLLLLLKHPEVTAKVQEEIDHVIGRH--RSPC-MQDRSHMPYTDAVIHEIQRYIDLVPTGVPHAVTTDIKFRNYLIPKGTIIITLLTSVLHDDKEFPNPKIFDPGHFLDENGNFKKSDYFMPFSAGKRICAGEGLARMELFLFLTTILQNFN 457          
BLAST of BQ623112 vs. ExPASy Swiss-Prot
Match: CP2J2_HUMAN (Cytochrome P450 2J2 OS=Homo sapiens GN=CYP2J2 PE=1 SV=2)

HSP 1 Score: 92.0485 bits (227), Expect = 3.095e-18
Identity = 58/188 (30.85%), Postives = 92/188 (48.94%), Query Frame = 3
Query:    9 FSDEEIVDFLVALLVAGYETTSTIMTLAVKFLTETPLALAQLKEEHDEIRAKKSKQEPLEWNDYKSMPFTQCVVNETLRVANIIS-GVFRRAMTDINIKGYTIPKGWRVFASFRAVHLDHDHFKDARSFNPWRWQNNSGATSPVNVFTPFGGGPRLCPGYELARVELSVFLHHLVTRFSWVPAEQDKL 569
            F +E ++   + L  AG ETTST +  A+ ++   P    +++ E D +  +  +         +SMP+T  V++E  R+ NII   V R    D  + GY +PKG  +  +  A+H D   +    +FNP  +  N G       F PF  G R C G +LAR EL +F   L+ +F++ P   +KL
Sbjct:  296 FHEENLICSTLDLFFAGTETTSTTLRWALLYMALYPEIQEKVQAEIDRVIGQGQQPSTAA---RESMPYTNAVIHEVQRMGNIIPLNVPREVTVDTTLAGYHLPKGTMILTNLTALHRDPTEWATPDTFNPDHFLEN-GQFKKREAFMPFSIGKRACLGEQLARTELFIFFTSLMQKFTFRPPNNEKL 479          
BLAST of BQ623112 vs. ExPASy Swiss-Prot
Match: CP2CJ_HUMAN (Cytochrome P450 2C19 OS=Homo sapiens GN=CYP2C19 PE=1 SV=3)

HSP 1 Score: 92.0485 bits (227), Expect = 3.095e-18
Identity = 59/179 (32.96%), Postives = 91/179 (50.84%), Query Frame = 3
Query:    9 FSDEEIVDFLVALLVAGYETTSTIMTLAVKFLTETPLALAQLKEEHDEIRAKKSKQEPLEWNDYKSMPFTQCVVNETLRVANIISGVFRRAMT-DINIKGYTIPKGWRVFASFRAVHLDHDHFKDARSFNPWRWQNNSGATSPVNVFTPFGGGPRLCPGYELARVELSVFLHHLVTRFS 542
            F+ E +V     LL AG ETTST +  A+  L + P   A+++EE + +  +   + P    D   MP+T  VV+E  R  ++I      A+T D+  + Y IPKG  +  S  +V  D+  F +   F+P  + +  G     N F PF  G R+C G  LAR+EL +FL  ++  F+
Sbjct:  282 FTIENLVITAADLLGAGTETTSTTLRYALLLLLKHPEVTAKVQEEIERVVGRN--RSPC-MQDRGHMPYTDAVVHEVQRYIDLIPTSLPHAVTCDVKFRNYLIPKGTTILTSLTSVLHDNKEFPNPEMFDPRHFLDEGGNFKKSNYFMPFSAGKRICVGEGLARMELFLFLTFILQNFN 457          
BLAST of BQ623112 vs. ExPASy Swiss-Prot
Match: CP239_MOUSE (Cytochrome P450 2C39 OS=Mus musculus GN=Cyp2c39 PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 3.095e-18
Identity = 61/187 (32.62%), Postives = 92/187 (49.20%), Query Frame = 3
Query:    9 FSDEEIVDFLVALLVAGYETTSTIMTLAVKFLTETPLALAQLKEEHDEIRAKKSKQEPLEWNDYKSMPFTQCVVNETLRVANIISGVFRRAMT-DINIKGYTIPKGWRVFASFRAVHLDHDHFKDARSFNPWRWQNNSGATSPVNVFTPFGGGPRLCPGYELARVELSVFLHHLVTRFSWVPAEQDK 566
            FS E +   +  L  AG ETTST +  A+  L + P   A+++EE D +  +   + P    D   MP+T  +++E  R  N++     RA+T DI  + Y IPKG  V  S  +V  D   F +   F+P  + + +G     + F PF  G R+C G  LAR+EL +FL  ++  F   P    K
Sbjct:  282 FSLENLACTINNLFAAGTETTSTTLRYALLLLMKYPDVTAKVQEEIDHVIGRH--RSPC-MQDRNHMPYTDAMIHEVQRFINLVPNNIPRAVTCDIKFRNYLIPKGTTVVTSLTSVLHDSKEFPNPELFDPGHFLDANGNFKKSDHFMPFSAGKRVCAGEGLARMELFLFLTTILQNFKLKPLVHPK 465          
BLAST of BQ623112 vs. ExPASy Swiss-Prot
Match: CP3A9_RAT (Cytochrome P450 3A9 OS=Rattus norvegicus GN=Cyp3a9 PE=2 SV=2)

HSP 1 Score: 91.6633 bits (226), Expect = 4.043e-18
Identity = 59/186 (31.72%), Postives = 90/186 (48.39%), Query Frame = 3
Query:   12 SDEEIVDFLVALLVAGYETTSTIMTLAVKFLTETPLALAQLKEEHDEIRAKKSKQEPLEWNDYKSMPFTQCVVNETLRVANIISGVFRRAMTDINIKGYTIPKGWRVFASFRAVHLDHDHFKDARSFNPWRWQNNSGATSPVNVFTPFGGGPRLCPGYELARVELSVFLHHLVTRFSWVPAEQDKL 569
            SD EIV   V  + AGYETTS+ ++  +  L   P    +L+   DEI A    +    ++    M +   VVNETLR+  I   + R   TD+ I G  IPKG  V     A+H D  ++ +   F P R+   +       ++ PFG GPR C G   A + + V L  ++  FS+ P ++ ++
Sbjct:  291 SDVEIVAQSVIFIFAGYETTSSALSFVLYLLAIHPDIQKKLQ---DEIDAALPNKAHATYDTLLQMEYLDMVVNETLRLYPIAGRLERVCKTDVEINGVFIPKGTVVMIPTFALHKDPHYWPEPEEFRPERFSKKNQDNINPYMYLPFGNGPRNCIGMRFALMNMKVALFRVLQNFSFQPCKETQI 473          
BLAST of BQ623112 vs. ExPASy Swiss-Prot
Match: CP3A7_HUMAN (Cytochrome P450 3A7 OS=Homo sapiens GN=CYP3A7 PE=1 SV=2)

HSP 1 Score: 91.6633 bits (226), Expect = 4.043e-18
Identity = 60/211 (28.44%), Postives = 103/211 (48.82%), Query Frame = 3
Query:   12 SDEEIVDFLVALLVAGYETTSTIMTLAVKFLTETPLALAQLKEEHDEIRAKKSKQEPLEWNDYKSMPFTQCVVNETLRVANIISGVFRRAMTDINIKGYTIPKGWRVFASFRAVHLDHDHFKDARSFNPWRWQNNSGATSPVNVFTPFGGGPRLCPGYELARVELSVFLHHLVTRFSWVPAEQD----KLVFFSTTRTQKRYPIIVHVEMK 632
            SD E++   +  + AGYETTS++++  +  L   P    ++++E D +   K+   P  ++    + +   VVNETLR+  +   + R    D+ I G  IPKG  V      +H D  ++++   F P R+   +       ++TPFG GPR C G   A V + + L  ++  FS+ P ++     KL F     T+K  PI++  E +
Sbjct:  291 SDLELMAQSIIFIFAGYETTSSVLSFIIYELATHPDVQQKVQKEIDTVLPNKA---PPTYDTVLQLEYLDMVVNETLRLFPVAMRLERVCKKDVEINGMFIPKGVVVMIPSYVLHHDPKYWREPEKFLPERFSKKNKDNIDPYIYTPFGSGPRNCIGMRFALVNMKLALVRVLQNFSFKPCKETQIPLKLRFGGLLLTEK--PIVLKAESR 496          
The following BLAST results are available for this feature:
BLAST of BQ623112 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 422
Match NameE-valueIdentityDescription
CP2C8_HUMAN1.389e-1832.40Cytochrome P450 2C8 OS=Homo sapiens GN=CYP2C8 PE=1... [more]
CP3AV_MESAU1.815e-1829.95Cytochrome P450 3A31 OS=Mesocricetus auratus GN=CY... [more]
CP26A_MOUSE1.815e-1832.54Cytochrome P450 26A1 OS=Mus musculus GN=Cyp26a1 PE... [more]
CP341_MOUSE2.370e-1831.55Cytochrome P450 3A41 OS=Mus musculus GN=Cyp3a41a P... [more]
CP2CK_MACFA2.370e-1831.84Cytochrome P450 2C20 OS=Macaca fascicularis GN=CYP... [more]
CP2J2_HUMAN3.095e-1830.85Cytochrome P450 2J2 OS=Homo sapiens GN=CYP2J2 PE=1... [more]
CP2CJ_HUMAN3.095e-1832.96Cytochrome P450 2C19 OS=Homo sapiens GN=CYP2C19 PE... [more]
CP239_MOUSE3.095e-1832.62Cytochrome P450 2C39 OS=Mus musculus GN=Cyp2c39 PE... [more]
CP3A9_RAT4.043e-1831.72Cytochrome P450 3A9 OS=Rattus norvegicus GN=Cyp3a9... [more]
CP3A7_HUMAN4.043e-1828.44Cytochrome P450 3A7 OS=Homo sapiens GN=CYP3A7 PE=1... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00203 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00203 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623112 ID=BQ623112; Name=BQ623112; organism=Citrus sinensis; type=EST; length=689bp
ACGATGGCTTTTCCGATGAGGAGATCGTTGATTTCTTGGTGGCTTTGTTG
GTGGCTGGCTATGAAACAACGTCCACCATCATGACTCTTGCTGTTAAGTT
CCTCACTGAGACTCCTCTCGCTTTGGCTCAACTAAAGGAGGAGCATGATG
AGATAAGGGCAAAGAAGAGCAAGCAAGAGCCTCTCGAATGGAATGATTAT
AAGTCAATGCCGTTCACTCAATGTGTTGTCAATGAAACTCTGAGAGTGGC
CAACATAATCAGTGGGGTTTTTAGAAGAGCAATGACAGATATCAACATCA
AAGGTTACACTATACCGAAGGGGTGGAGAGTTTTTGCATCATTCAGGGCT
GTACATTTAGACCATGACCATTTCAAAGATGCTCGCTCTTTCAACCCATG
GAGATGGCAGAATAATTCAGGAGCAACGAGTCCAGTAAATGTATTCACTC
CGTTCGGCGGTGGGCCACGGCTGTGCCCTGGATATGAACTTGCGAGGGTT
GAGCTCTCTGTTTTTCTTCACCACTTAGTTACTCGTTTCAGCTGGGTACC
AGCTGAACAAGATAAGTTGGTATTCTTTTCAACAACAAGAACCCAGAAGA
GGTACCCCATCATTGTGCACGTCGAAATGAAAGTTAAAGCCCTGTAAAGA
ATAAAGGAGAACCAGCAGGGTGGAGTAAGAAATGCTAAA
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