BQ623112

Overview
NameBQ623112
Unique NameBQ623112
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length689
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8605 contig Csv1_Contig8605:591..1279. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623112 vs. ExPASy Swiss-Prot
Match: C340_ORYLA (Cytochrome P450 3A40 OS=Oryzias latipes GN=cyp3a40 PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.006e-17
Identity = 58/202 (28.71%), Postives = 93/202 (46.04%), Query Frame = 3
Query:    6 GFSDEEIVDFLVALLVAGYETTSTIMTLAVKFLTETPLALAQLKEEHDEIRAKKSKQEPLEWNDYKSMPFTQCVVNETLRVANIISGVFRRAMTDINIKGYTIPKGWRVFASFRAVHLDHDHFKDARSFNPWRWQNNSGATSPVNVFTPFGGGPRLCPGYELARVELSVFLHHLVTRFSW-------VPAEQDKLVFFSTTR 590
            G SD EI+   +  + AGYETTS+ +T     L   P  + +L++E D     K+   P+++     M +  CVVNE+LR+  I + + R A   + + G  IPK   V      +H D + + +   F P R+   +  T     + PFG GPR C G   A V + + +  ++  + +       VP E D   F +  R
Sbjct:  290 GLSDHEILSQAMIFIFAGYETTSSSLTFLAYNLATNPEVMKKLQKEIDATFPNKA---PVQYVPLMEMEYLDCVVNESLRLYPIAARLERVAKATVEVNGLVIPKDMVVMVPTWPLHRDPELWPEPEKFKPERFSKENKDTFDPYTYMPFGAGPRNCIGMRFALVMMKLAVVEILQTYDFSVCKETEVPFEMDVQGFLAPKR 488          
BLAST of BQ623112 vs. ExPASy Swiss-Prot
Match: CP2DG_CAVPO (Cytochrome P450 2D16 OS=Cavia porcellus GN=CYP2D16 PE=1 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.620e-17
Identity = 61/188 (32.45%), Postives = 93/188 (49.47%), Query Frame = 3
Query:    9 FSDEEIVDFLVALLVAGYETTSTIMTLAVKFLTETPLALAQLKEEHDEIRAKKSKQEPLEWNDYKSMPFTQCVVNETLRVANIIS-GVFRRAMTDINIKGYTIPKGWRVFASFRAVHLDHDHFKDARSFNPWRWQNNSGATSPVNVFTPFGGGPRLCPGYELARVELSVFLHHLVTRFSW-VPAEQDK 566
            F+DE +   +  L  AG  TTS  ++ A+  +   P     ++EE DE+  +    E     D   MPFT  V++E  R A+I+  GV      D  ++G+ IPKG  +F +  +V  D   ++    F+P  + +  G       F PF  GPR+C G  LAR+EL +F   L+ RFS+ VP  Q +
Sbjct:  293 FNDENLRLLVSDLFGAGMVTTSVTLSWALLLMILHPDVQRHVQEEIDEVIGQVRCPEMA---DQAHMPFTNAVIHEVQRFADIVPMGVPHMTSRDTEVQGFLIPKGTMLFTNLSSVLKDETVWEKPLHFHPGHFLDAEGRFVKREAFMPFSAGPRICLGEPLARMELFLFFTSLLQRFSFSVPEGQPR 477          
BLAST of BQ623112 vs. ExPASy Swiss-Prot
Match: CP3AH_CAVPO (Cytochrome P450 3A17 OS=Cavia porcellus GN=CYP3A17 PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.422e-17
Identity = 61/206 (29.61%), Postives = 98/206 (47.57%), Query Frame = 3
Query:   12 SDEEIVDFLVALLVAGYETTSTIMTLAVKFLTETPLALAQLKEEHDEIRAKKSKQEPLEWNDYKSMPFTQCVVNETLRVANIISGVFRRAMTDINIKGYTIPKGWRVFASFRAVHLDHDHFKDARSFNPWRWQNNSGATSPVNVFTPFGGGPRLCPGYELARVELSVFLHHLVTRFSWVPAEQDK--LVFFSTTRTQKRYPIIVHV 623
            SD EI+   +  +VAGYETTS+ +   +  L   P    +L++E D+    K+      ++    M +   VVNETLR+  + + + R +  D  I G + PKG  V     A+H D  ++ +   F P R+   +       ++ PFG GPR C G  +A + L + L  L+  FS+   ++ +  L   S    Q   PII+ V
Sbjct:  291 SDVEILAQSIFFIVAGYETTSSTLCFIMYSLATHPDVQKKLQQEIDKTLPNKAFPT---YDVMMEMEYLDMVVNETLRLYPVTNRIERMSKKDFEINGMSFPKGTGVMIPSFALHRDSKYWPEPDEFRPERFSKKNKENIDPYIYMPFGNGPRNCIGMRMALMNLKLALIRLLQNFSFYTCKETQIPLRLGSQVILQPAKPIILKV 493          
BLAST of BQ623112 vs. ExPASy Swiss-Prot
Match: CY250_MOUSE (Cytochrome P450 2C50 OS=Mus musculus GN=Cyp2c50 PE=1 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 4.470e-17
Identity = 56/184 (30.43%), Postives = 89/184 (48.37%), Query Frame = 3
Query:   18 EEIVDFLVALLVAGYETTSTIMTLAVKFLTETPLALAQLKEEHDEIRAKKSKQEPLEWNDYKSMPFTQCVVNETLRVANIISGVFRRAMT-DINIKGYTIPKGWRVFASFRAVHLDHDHFKDARSFNPWRWQNNSGATSPVNVFTPFGGGPRLCPGYELARVELSVFLHHLVTRFSWVPAEQDK 566
            E +   +  L  AG ETTST +  A+  L + P   A+++EE + +  K   + P    D   MP+T  +++E  R  +++       +T DI  + Y IPKG  V  S  +V  D   F +   F+P  + + +G     + F PF  G R+C G  LAR+EL +FL  ++  F+  P    K
Sbjct:  285 EHLAITVTDLFSAGTETTSTTLRYALLLLLKYPHVTAKVQEEIEHVIGKH--RSPC-MQDRSRMPYTDAMIHEVQRFIDLVPNSLPHEVTCDIKFRNYFIPKGTNVITSLSSVLRDSKEFPNPEKFDPGHFLDENGKFKKSDYFMPFSTGKRICAGEGLARMELFLFLTSILQNFNLKPLVHPK 465          
BLAST of BQ623112 vs. ExPASy Swiss-Prot
Match: CP3AF_CAVPO (Cytochrome P450 3A15 OS=Cavia porcellus GN=CYP3A15 PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 4.470e-17
Identity = 59/206 (28.64%), Postives = 98/206 (47.57%), Query Frame = 3
Query:   12 SDEEIVDFLVALLVAGYETTSTIMTLAVKFLTETPLALAQLKEEHDEIRAKKSKQEPLEWNDYKSMPFTQCVVNETLRVANIISGVFRRAMTDINIKGYTIPKGWRVFASFRAVHLDHDHFKDARSFNPWRWQNNSGATSPVNVFTPFGGGPRLCPGYELARVELSVFLHHLVTRFSWVPAEQDK--LVFFSTTRTQKRYPIIVHV 623
            SD EI+   +  + AGYET+S+ ++  +  L   P    +L +E D+    K+      ++    M +   VVNETLR+  + + + R +  D  I G + PKG  V     A+H D  ++ +   F P R+   +       ++ PFG GPR C G  +A + L + L  L+  FS+ P ++ +  L   S    Q   P+I+ V
Sbjct:  291 SDVEILAQSIIFIFAGYETSSSTLSCIMYSLATHPDVQKKLHQEIDKTLPNKAFPT---YDVMMEMEYLDMVVNETLRLYPVANRIERMSKKDFEINGMSFPKGTLVMIPSFALHRDSKYWPEPDEFRPERFSKKNKENIDPYIYMPFGNGPRNCIGRRMALMNLKLALIRLLQNFSFYPCKETQIPLRLSSEALLQPEKPLILKV 493          
BLAST of BQ623112 vs. ExPASy Swiss-Prot
Match: CP3AO_SHEEP (Cytochrome P450 3A24 OS=Ovis aries GN=CYP3A24 PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 5.838e-17
Identity = 55/186 (29.57%), Postives = 90/186 (48.39%), Query Frame = 3
Query:   12 SDEEIVDFLVALLVAGYETTSTIMTLAVKFLTETPLALAQLKEEHDEIRAKKSKQEPLEWNDYKSMPFTQCVVNETLRVANIISGVFRRAMTDINIKGYTIPKGWRVFASFRAVHLDHDHFKDARSFNPWRWQNNSGATSPVNVFTPFGGGPRLCPGYELARVELSVFLHHLVTRFSWVPAEQDKL 569
            SD+E++   V  + AGYETTS  ++  +  L   P    +L+EE D     K+   P  ++    M +   VVNETLR+  I   + R    D+ I G +IPKG  V      +H D   + +   F P R+   +  +    V+ PFG GPR C G   A + + + +  ++  FS+ P ++ ++
Sbjct:  291 SDQELMAQSVIFIFAGYETTSNTLSFLLYILATHPDVQQKLQEEIDATFPNKA---PPTYDVLAQMEYLDMVVNETLRMFPIAVRLDRLCKKDVEIHGVSIPKGTAVTVPIFVLHRDPQLWPEPEEFRPERFSKKNKDSINPYVYLPFGTGPRNCIGMRFAIMNMKLAIVRVLQNFSFKPCKETQI 473          
BLAST of BQ623112 vs. ExPASy Swiss-Prot
Match: CP2F3_CAPHI (Cytochrome P450 2F3 OS=Capra hircus GN=CYP2F3 PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 5.838e-17
Identity = 55/170 (32.35%), Postives = 82/170 (48.24%), Query Frame = 3
Query:   45 LLVAGYETTSTIMTLAVKFLTETPLALAQLKEEHDEIRAKKSKQEPLEWNDYKSMPFTQCVVNETLRVANIIS-GVFRRAMTDINIKGYTIPKGWRVFASFRAVHLDHDHFKDARSFNPWRWQNNSGATSPVNVFTPFGGGPRLCPGYELARVELSVFLHHLVTRFSWVP 551
            LL  G ET  T +  A + L + P    +++EE D +  ++         D   MP+T  V++E  R A+II   +  R   D N +G+TIP+G  V      VH D   F   + FNP  + + + +      F PF  G RLC G  LAR+EL ++L  ++  FS  P
Sbjct:  295 LLFGGTETVGTTLRHAFRLLMKYPEVQVRVQEEIDRVVGRERLPTV---EDRAEMPYTDAVIHEVQRFADIIPMSLPHRVTRDTNFRGFTIPRGTDVITLLNTVHYDPSQFLKPKEFNPEHFLDANMSFKKSPAFMPFSAGRRLCLGEALARMELFLYLTAILQSFSLQP 461          
BLAST of BQ623112 vs. ExPASy Swiss-Prot
Match: CP2A5_MOUSE (Cytochrome P450 2A5 OS=Mus musculus GN=Cyp2a5 PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 5.838e-17
Identity = 60/188 (31.91%), Postives = 94/188 (50.00%), Query Frame = 3
Query:   45 LLVAGYETTSTIMTLAVKFLTETPLALAQLKEEHDEIRAKKSKQEPLEWNDYKSMPFTQCVVNETLRVANIIS-GVFRRAMTDINIKGYTIPKGWRVFASFRAVHLDHDHFKDARSFNPWRWQNNSGATSPVNVFTPFGGGPRLCPGYELARVELSVFLHHLVTRFSW--VPAEQD-----KLVFFST 584
            L  AG ET ST +      L + P   A++ EE D +  +  + +   + D   MP+T+ V++E  R A++I  G+ RR   D   + + +PKG  VF    +V  D   F + + FNP  + ++ G     + F PF  G R C G  LAR+EL +FL +++  F +    A QD     +LV F+T
Sbjct:  298 LFFAGTETVSTTLRYGFLLLMKHPDIEAKVHEEIDRVIGRNRQPK---YEDRMKMPYTEAVIHEIQRFADMIPMGLARRVTKDTKFRDFLLPKGTEVFPMLGSVLKDPKFFSNPKDFNPKHFLDDKGQFKKNDAFVPFSIGKRYCFGEGLARMELFLFLTNIMQNFHFKSTQAPQDIDVSPRLVGFAT 482          
BLAST of BQ623112 vs. ExPASy Swiss-Prot
Match: C81F1_ARATH (Cytochrome P450 81F1 OS=Arabidopsis thaliana GN=CYP81F1 PE=2 SV=2)

HSP 1 Score: 87.8113 bits (216), Expect = 5.838e-17
Identity = 54/194 (27.84%), Postives = 100/194 (51.55%), Query Frame = 3
Query:    9 FSDEEIVDFLVALLVAGYETTSTIMTLAVKFLTETPLALAQLKEEHDEIRAKKSKQEPLEWNDYKSMPFTQCVVNETLRVANIISGVFRRAMTD-INIKGYTIPKGWRVFASFRAVHLDHDHFKDARSFNPWRWQNNSGATSPVNVFTPFGGGPRLCPGYELARVELSVFLHHLVTRFSWVPAEQDKLVFFSTT 587
            ++D  I   ++++++AG ET++  +  A+  L   P  L + + E DE   K  K   ++ +D   +P+ Q VV+ET R+  +   +  R+ TD + I GY +P+   V  +  A+H D + +++   FNP R+ +  G+   V    PFG G R CPG  L +  +++ L  L+  F W   + +++    +T
Sbjct:  285 YTDVIIKGLMMSMMLAGTETSAVTLEWAMANLLRNPEVLEKARSEIDE---KIGKDRLIDESDIAVLPYLQNVVSETFRLFPVAPFLIPRSPTDDMKIGGYDVPRDTIVMVNAWAIHRDPEIWEEPEKFNPDRYNDGCGSDYYVYKLMPFGNGRRTCPGAGLGQRIVTLALGSLIQCFEWENVKGEEMDMSEST 475          
BLAST of BQ623112 vs. ExPASy Swiss-Prot
Match: CP2CR_MESAU (Cytochrome P450 2C27 OS=Mesocricetus auratus GN=CYP2C27 PE=2 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 7.624e-17
Identity = 56/178 (31.46%), Postives = 90/178 (50.56%), Query Frame = 3
Query:    9 FSDEEIVDFLVALLVAGYETTSTIMTLAVKFLTETPLALAQLKEEHDEIRAKKSKQEPLEWNDYKSMPFTQCVVNETLRVANIISGVFRRAMT-DINIKGYTIPKGWRVFASFRAVHLDHDHFKDARSFNPWRWQNNSGATSPVNVFTPFGGGPRLCPGYELARVELSVFLHHLVTRF 539
            F+ E +   +  L  AG ETTST +  A+  L + P   A+++EE D++  +   + P    D   MP+T  +++E  R  ++I      A+T DI  + Y IPKG  +  S  +V  D   F +   F+P  + + +G     + F PF  G R+C G  LAR+EL +FL  ++  F
Sbjct:  282 FTLENLATTVRDLFAAGTETTSTTLRYALLLLLKHPHVTAKVQEEIDQVVGRH--RNPC-MQDRSHMPYTDAMIHEVQRFIDLIPTNLPHAVTCDIKFRDYFIPKGTTIITSLSSVLHDSKEFPNPEVFDPGHFLDKNGKFKKSDYFMPFSTGKRMCAGEGLARMELFLFLTTILQNF 456          
The following BLAST results are available for this feature:
BLAST of BQ623112 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 422
Match NameE-valueIdentityDescription
C340_ORYLA2.006e-1728.71Cytochrome P450 3A40 OS=Oryzias latipes GN=cyp3a40... [more]
CP2DG_CAVPO2.620e-1732.45Cytochrome P450 2D16 OS=Cavia porcellus GN=CYP2D16... [more]
CP3AH_CAVPO3.422e-1729.61Cytochrome P450 3A17 OS=Cavia porcellus GN=CYP3A17... [more]
CY250_MOUSE4.470e-1730.43Cytochrome P450 2C50 OS=Mus musculus GN=Cyp2c50 PE... [more]
CP3AF_CAVPO4.470e-1728.64Cytochrome P450 3A15 OS=Cavia porcellus GN=CYP3A15... [more]
CP3AO_SHEEP5.838e-1729.57Cytochrome P450 3A24 OS=Ovis aries GN=CYP3A24 PE=2... [more]
CP2F3_CAPHI5.838e-1732.35Cytochrome P450 2F3 OS=Capra hircus GN=CYP2F3 PE=2... [more]
CP2A5_MOUSE5.838e-1731.91Cytochrome P450 2A5 OS=Mus musculus GN=Cyp2a5 PE=2... [more]
C81F1_ARATH5.838e-1727.84Cytochrome P450 81F1 OS=Arabidopsis thaliana GN=CY... [more]
CP2CR_MESAU7.624e-1731.46Cytochrome P450 2C27 OS=Mesocricetus auratus GN=CY... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00203 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00203 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623112 ID=BQ623112; Name=BQ623112; organism=Citrus sinensis; type=EST; length=689bp
ACGATGGCTTTTCCGATGAGGAGATCGTTGATTTCTTGGTGGCTTTGTTG
GTGGCTGGCTATGAAACAACGTCCACCATCATGACTCTTGCTGTTAAGTT
CCTCACTGAGACTCCTCTCGCTTTGGCTCAACTAAAGGAGGAGCATGATG
AGATAAGGGCAAAGAAGAGCAAGCAAGAGCCTCTCGAATGGAATGATTAT
AAGTCAATGCCGTTCACTCAATGTGTTGTCAATGAAACTCTGAGAGTGGC
CAACATAATCAGTGGGGTTTTTAGAAGAGCAATGACAGATATCAACATCA
AAGGTTACACTATACCGAAGGGGTGGAGAGTTTTTGCATCATTCAGGGCT
GTACATTTAGACCATGACCATTTCAAAGATGCTCGCTCTTTCAACCCATG
GAGATGGCAGAATAATTCAGGAGCAACGAGTCCAGTAAATGTATTCACTC
CGTTCGGCGGTGGGCCACGGCTGTGCCCTGGATATGAACTTGCGAGGGTT
GAGCTCTCTGTTTTTCTTCACCACTTAGTTACTCGTTTCAGCTGGGTACC
AGCTGAACAAGATAAGTTGGTATTCTTTTCAACAACAAGAACCCAGAAGA
GGTACCCCATCATTGTGCACGTCGAAATGAAAGTTAAAGCCCTGTAAAGA
ATAAAGGAGAACCAGCAGGGTGGAGTAAGAAATGCTAAA
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