BQ623112

Overview
NameBQ623112
Unique NameBQ623112
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length689
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8605 contig Csv1_Contig8605:591..1279. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623112 vs. ExPASy Swiss-Prot
Match: CP2A4_MOUSE (Cytochrome P450 2A4 OS=Mus musculus GN=Cyp2a4 PE=2 SV=2)

HSP 1 Score: 87.4261 bits (215), Expect = 7.624e-17
Identity = 53/166 (31.93%), Postives = 84/166 (50.60%), Query Frame = 3
Query:   45 LLVAGYETTSTIMTLAVKFLTETPLALAQLKEEHDEIRAKKSKQEPLEWNDYKSMPFTQCVVNETLRVANIIS-GVFRRAMTDINIKGYTIPKGWRVFASFRAVHLDHDHFKDARSFNPWRWQNNSGATSPVNVFTPFGGGPRLCPGYELARVELSVFLHHLVTRF 539
            L  AG ET ST +      L + P   A++ EE D +  +  + +   + D   MP+T+ V++E  R A++I  G+ RR   D   + + +PKG  VF    +V  D   F + + FNP  + ++ G     + F PF  G R C G  LAR+EL +FL +++  F
Sbjct:  298 LFFAGTETVSTTLRYGFLLLMKYPDIEAKVHEEIDRVIGRNRQPK---YEDRMKMPYTEAVIHEIQRFADLIPMGLARRVTKDTKFRDFLLPKGTEVFPMLGSVLKDPKFFSNPKDFNPKHFLDDKGQFKKSDAFVPFSIGKRYCFGEGLARMELFLFLTNIMQNF 460          
BLAST of BQ623112 vs. ExPASy Swiss-Prot
Match: C13A5_CAEEL (Putative cytochrome P450 CYP13A5 OS=Caenorhabditis elegans GN=cyp-13A5 PE=2 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 7.624e-17
Identity = 58/196 (29.59%), Postives = 98/196 (50.00%), Query Frame = 3
Query:   18 EEIVDFLVALLVAGYETTSTIMTLAVKFLTETPLALAQLKEEHDEIRAKKSKQEPLEWNDYKSMPFTQCVVNETLRVANIISGVF-RRAMTDINIKGYTIPKGWRVFASFRAVHLDHDHF-KDARSFNPWRWQNNSGATSPVNVFTPFGGGPRLCPGYELARVELSVFLHHLVTRFSWVPAEQD----KLVFFSTT 587
            +EI+  L   L+AGY+TT+  ++ +   L   P    +L+EE D    ++     + ++    + + +CVV E LR+  + S V  R+ M + N+ G  I KG  V      +H D   + +DA  F P RW++          + PFG GPR+C G  LA +E  + L H++ ++++  + Q     KLV  +TT
Sbjct:  314 DEIIGQLFVFLLAGYDTTALSLSYSSYLLARHPEIQKKLQEEVD----RECPNPEVTFDQISKLKYMECVVKEALRMYPLASIVHNRKCMKETNVLGVQIEKGTNVQVDTWTLHYDPKVWGEDANEFRPERWESGDELFYAKGGYLPFGMGPRICIGMRLAMMEKKMLLTHILKKYTFETSTQTEIPLKLVGSATT 505          
BLAST of BQ623112 vs. ExPASy Swiss-Prot
Match: CP3AR_ONCMY (Cytochrome P450 3A27 OS=Oncorhynchus mykiss GN=cyp3a27 PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 9.958e-17
Identity = 53/193 (27.46%), Postives = 90/193 (46.63%), Query Frame = 3
Query:    6 GFSDEEIVDFLVALLVAGYETTSTIMTLAVKFLTETPLALAQLKEEHDEIRAKKSKQEPLEWNDYKSMPFTQCVVNETLRVANIISGVFRRAMTDINIKGYTIPKGWRVFASFRAVHLDHDHFKDARSFNPWRWQNNSGATSPVNVFTPFGGGPRLCPGYELARVELSVFLHHLVTRFSW-------VPAEQD 563
            G +D EI+   +  + AGYET+S+ M+     L      + +L+EE D +   K+   P+++     M +  CV+NE+LR+  I   + R A   + I G  IPK   V      +H D + + D   F P R+   +  +     + PFG GPR C G   A + + + +  ++  F++       +P E D
Sbjct:  294 GLTDHEILSQAMIFIFAGYETSSSTMSFLAYNLATNHHVMTKLQEEIDTVFPNKA---PIQYEALMQMDYLDCVLNESLRLYPIAPRLERVAKKTVEINGIVIPKDCIVLVPTWTLHRDPEIWSDPEEFKPERFSKENKESIDPYTYMPFGAGPRNCIGMRFALIMIKLAMVEILQSFTFSVCDETEIPLEMD 483          
BLAST of BQ623112 vs. ExPASy Swiss-Prot
Match: CP2K1_ONCMY (Cytochrome P450 2K1 OS=Oncorhynchus mykiss GN=cyp2k1 PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 9.958e-17
Identity = 57/182 (31.32%), Postives = 92/182 (50.55%), Query Frame = 3
Query:    9 FSDEEIVDFLVALLVAGYETTSTIMTLAVKFLTETPLALAQLKEEHDEIRAKKSKQEPLEWNDYKSMPFTQCVVNETLRVANIIS-GVFRRAMTDINIKGYTIPKGWRVFASFRAVHLDHDHFKDARSFNPWRWQNNSGATSPVNVFTPFGGGPRLCPGYELARVELSVFLHHLVTRFSWVP 551
            + D+ +V  +  L  AG +TT T +   +  +T+ P    Q++EE   +    S+Q  +E  D K++P+T  V++ET R+ANI+   V      D+  +GY I KG  V     +V  D   ++   +FNP  + +  G     + F  F  G R+C G  LAR+EL +F   L+ RF + P
Sbjct:  295 YHDDNLVFSVGNLFSAGTDTTGTTLRWGLLLMTKYPHIQDQVQEEISRVIG--SRQTLVE--DRKNLPYTDAVIHETQRLANIVPMSVPHTTSRDVTFQGYFIKKGTSVIPLLTSVLQDDSEWESPNTFNPSHFLDEQGGFVKRDAFMAFSAGRRVCLGEGLARMELFLFFTSLLQRFRFSP 472          
BLAST of BQ623112 vs. ExPASy Swiss-Prot
Match: CP2CN_RAT (Cytochrome P450 2C23 OS=Rattus norvegicus GN=Cyp2c23 PE=2 SV=2)

HSP 1 Score: 87.0409 bits (214), Expect = 9.958e-17
Identity = 52/167 (31.14%), Postives = 79/167 (47.31%), Query Frame = 3
Query:   45 LLVAGYETTSTIMTLAVKFLTETPLALAQLKEEHDEIRAKKSKQEPLEWNDYKSMPFTQCVVNETLRVANIISGVFRRAMT-DINIKGYTIPKGWRVFASFRAVHLDHDHFKDARSFNPWRWQNNSGATSPVNVFTPFGGGPRLCPGYELARVELSVFLHHLVTRFS 542
            L  AG ETTST +   +  L + P   A++ EE D +  +    +P    D   +P+T  V++E  R   ++      A+  D   + Y IPKG  V     +V LD   F +   F+P  + + +G     + F PF  G R C G  LAR+EL +F   L+ +FS
Sbjct:  298 LFTAGTETTSTTLRFGLLLLMKYPEVQAKVHEELDRVIGR---HQPPSMKDKMKLPYTDAVLHEIQRYITLLPSSLPHAVVQDTKFRDYVIPKGTTVLPMLSSVMLDQKEFANPEKFDPGHFLDKNGCFKKTDYFVPFSLGKRACVGESLARMELFLFFTTLLQKFS 461          
BLAST of BQ623112 vs. ExPASy Swiss-Prot
Match: CP2C9_HUMAN (Cytochrome P450 2C9 OS=Homo sapiens GN=CYP2C9 PE=1 SV=3)

HSP 1 Score: 87.0409 bits (214), Expect = 9.958e-17
Identity = 56/179 (31.28%), Postives = 89/179 (49.72%), Query Frame = 3
Query:    9 FSDEEIVDFLVALLVAGYETTSTIMTLAVKFLTETPLALAQLKEEHDEIRAKKSKQEPLEWNDYKSMPFTQCVVNETLRVANIISGVFRRAMT-DINIKGYTIPKGWRVFASFRAVHLDHDHFKDARSFNPWRWQNNSGATSPVNVFTPFGGGPRLCPGYELARVELSVFLHHLVTRFS 542
            F+ E + +  V L  AG ETTST +  A+  L + P   A+++EE + +  +   + P    D   MP+T  VV+E  R  +++      A+T DI  + Y IPKG  +  S  +V  D+  F +   F+P  + +  G       F PF  G R+C G  LA +EL +FL  ++  F+
Sbjct:  282 FTIESLENTAVDLFGAGTETTSTTLRYALLLLLKHPEVTAKVQEEIERVIGRN--RSPC-MQDRSHMPYTDAVVHEVQRYIDLLPTSLPHAVTCDIKFRNYLIPKGTTILISLTSVLHDNKEFPNPEMFDPHHFLDEGGNFKKSKYFMPFSAGKRICVGEALAGMELFLFLTSILQNFN 457          
BLAST of BQ623112 vs. ExPASy Swiss-Prot
Match: CP242_PIG (Cytochrome P450 2C42 (Fragment) OS=Sus scrofa GN=CYP2C42 PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 9.958e-17
Identity = 55/179 (30.73%), Postives = 89/179 (49.72%), Query Frame = 3
Query:    9 FSDEEIVDFLVALLVAGYETTSTIMTLAVKFLTETPLALAQLKEEHDEIRAKKSKQEPLEWNDYKSMPFTQCVVNETLRVANIISGVFRRAMT-DINIKGYTIPKGWRVFASFRAVHLDHDHFKDARSFNPWRWQNNSGATSPVNVFTPFGGGPRLCPGYELARVELSVFLHHLVTRFS 542
            ++ E ++  +  +  AG ETTST M   +  L + P   A+++EE D +  +          D   MP+T  VV+E  R  +++      A+T DI  + Y IPKG  +  S  +V  D   F +   F+P  + + SG     + F PF  G R+C G  LAR+EL +FL  ++ +F+
Sbjct:  119 YTIENLIATVSDMFSAGTETTSTTMRYGLLLLLKHPEVTAKVQEEIDRVIGR---HRSACMQDRSHMPYTDAVVHEIQRYIDLVPTNLPHAVTCDIKFRNYLIPKGTTILTSLTSVLYDCKAFPNPEVFDPGHFLDESGNFKKSDYFMPFSTGKRICVGEGLARMELFLFLTTILQKFN 294          
BLAST of BQ623112 vs. ExPASy Swiss-Prot
Match: C135B_MYCTU (Putative cytochrome P450 135B1 OS=Mycobacterium tuberculosis GN=CYP135B1 PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 9.958e-17
Identity = 64/206 (31.07%), Postives = 93/206 (45.15%), Query Frame = 3
Query:   12 SDEEIVDFLVALLVAGYETTSTIMTLAVKFLTETPLALAQLKEEHDEIRAKKSKQEPLEWNDYKSMPFTQCVVNETLRVANIISGVFRRAMTDINIKGYTIPKGWRVFASFRAVHLDHDHFKDARSFNPWRWQNNSGATSPVNVFTPFGGGPRLCPGYELARVELSVFLHHLVTRFSWVPAEQDKLVFFSTTRTQKRYPIIVHVEM 629
            ++ E+ D L+ LLVAG++TT+T ++ A++ LT  P+ LA+  +  D   A           D     +   V  ETLR+  ++  V R     + + GY +P G  V  +   VH     + D   F+P R     GAT     + PFGGG R C G   A VE+ V L  ++ R           V  STT T    P + HV M
Sbjct:  247 TERELRDQLITLLVAGHDTTATGLSWALERLTRHPVTLAKAVQAADASAA----------GDPAGDEYLDAVAKETLRIRPVVYDVGRVLTEAVEVAGYRLPAGVMVVPAIGLVHASAQLYPDPERFDPDRM---VGATLSPTTWLPFGGGNRRCLGATFAMVEMRVVLREILRR-----------VELSTTTTSGERPKLKHVIM 428          
BLAST of BQ623112 vs. ExPASy Swiss-Prot
Match: C135B_MYCBO (Putative cytochrome P450 135B1 OS=Mycobacterium bovis GN=CYP135B1 PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 9.958e-17
Identity = 64/206 (31.07%), Postives = 93/206 (45.15%), Query Frame = 3
Query:   12 SDEEIVDFLVALLVAGYETTSTIMTLAVKFLTETPLALAQLKEEHDEIRAKKSKQEPLEWNDYKSMPFTQCVVNETLRVANIISGVFRRAMTDINIKGYTIPKGWRVFASFRAVHLDHDHFKDARSFNPWRWQNNSGATSPVNVFTPFGGGPRLCPGYELARVELSVFLHHLVTRFSWVPAEQDKLVFFSTTRTQKRYPIIVHVEM 629
            ++ E+ D L+ LLVAG++TT+T ++ A++ LT  P+ LA+  +  D   A           D     +   V  ETLR+  ++  V R     + + GY +P G  V  +   VH     + D   F+P R     GAT     + PFGGG R C G   A VE+ V L  ++ R           V  STT T    P + HV M
Sbjct:  247 TERELRDQLITLLVAGHDTTATGLSWALERLTRHPVTLAKAVQAADASAA----------GDPAGDEYLDAVAKETLRIRPVVYDVGRVLTEAVEVAGYRLPAGVMVVPAIGLVHASAQLYPDPERFDPDRM---VGATLSPTTWLPFGGGNRRCLGATFAMVEMRVVLREILRR-----------VELSTTTTSGERPKLKHVIM 428          
BLAST of BQ623112 vs. ExPASy Swiss-Prot
Match: CP2J1_RABIT (Cytochrome P450 2J1 OS=Oryctolagus cuniculus GN=CYP2J1 PE=1 SV=2)

HSP 1 Score: 86.6557 bits (213), Expect = 1.301e-16
Identity = 58/189 (30.69%), Postives = 96/189 (50.79%), Query Frame = 3
Query:    9 FSDEEIVDFLVALLVAGYETTSTIMTLAVKFLTETPLALAQLKEE-HDEIRAKKSKQEPLEWNDYKSMPFTQCVVNETLRVANIIS-GVFRRAMTDINIKGYTIPKGWRVFASFRAVHLDHDHFKDARSFNPWRWQNNSGATSPVNVFTPFGGGPRLCPGYELARVELSVFLHHLVTRFSWVPAEQDKL 569
            F++E ++   + L +AG ETTS  M   + F+   P    +++E+ H EI +   + +       +S+P+T  V++E  R+ NI+   V R    D  + GY +PKG  V  +  A+H D + +    +FNP  +  N G       F PF  G R C G +LA+ EL +F   L+ +F++ P   +KL
Sbjct:  296 FNEENLICSTLDLFLAGTETTSD-MRWGLLFMALYP----EIQEKVHAEIDSVIGQWQQPSMASRESLPYTNAVIHEVQRMGNILPLNVPREVTVDTTLAGYHLPKGTVVLTNLTALHKDPEEWATPDTFNPEHFLEN-GQFKKKEAFIPFSIGKRACLGEQLAKSELFIFFTSLMQKFTFKPPSDEKL 478          
The following BLAST results are available for this feature:
BLAST of BQ623112 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 422
Match NameE-valueIdentityDescription
CP2A4_MOUSE7.624e-1731.93Cytochrome P450 2A4 OS=Mus musculus GN=Cyp2a4 PE=2... [more]
C13A5_CAEEL7.624e-1729.59Putative cytochrome P450 CYP13A5 OS=Caenorhabditis... [more]
CP3AR_ONCMY9.958e-1727.46Cytochrome P450 3A27 OS=Oncorhynchus mykiss GN=cyp... [more]
CP2K1_ONCMY9.958e-1731.32Cytochrome P450 2K1 OS=Oncorhynchus mykiss GN=cyp2... [more]
CP2CN_RAT9.958e-1731.14Cytochrome P450 2C23 OS=Rattus norvegicus GN=Cyp2c... [more]
CP2C9_HUMAN9.958e-1731.28Cytochrome P450 2C9 OS=Homo sapiens GN=CYP2C9 PE=1... [more]
CP242_PIG9.958e-1730.73Cytochrome P450 2C42 (Fragment) OS=Sus scrofa GN=C... [more]
C135B_MYCTU9.958e-1731.07Putative cytochrome P450 135B1 OS=Mycobacterium tu... [more]
C135B_MYCBO9.958e-1731.07Putative cytochrome P450 135B1 OS=Mycobacterium bo... [more]
CP2J1_RABIT1.301e-1630.69Cytochrome P450 2J1 OS=Oryctolagus cuniculus GN=CY... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00203 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00203 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623112 ID=BQ623112; Name=BQ623112; organism=Citrus sinensis; type=EST; length=689bp
ACGATGGCTTTTCCGATGAGGAGATCGTTGATTTCTTGGTGGCTTTGTTG
GTGGCTGGCTATGAAACAACGTCCACCATCATGACTCTTGCTGTTAAGTT
CCTCACTGAGACTCCTCTCGCTTTGGCTCAACTAAAGGAGGAGCATGATG
AGATAAGGGCAAAGAAGAGCAAGCAAGAGCCTCTCGAATGGAATGATTAT
AAGTCAATGCCGTTCACTCAATGTGTTGTCAATGAAACTCTGAGAGTGGC
CAACATAATCAGTGGGGTTTTTAGAAGAGCAATGACAGATATCAACATCA
AAGGTTACACTATACCGAAGGGGTGGAGAGTTTTTGCATCATTCAGGGCT
GTACATTTAGACCATGACCATTTCAAAGATGCTCGCTCTTTCAACCCATG
GAGATGGCAGAATAATTCAGGAGCAACGAGTCCAGTAAATGTATTCACTC
CGTTCGGCGGTGGGCCACGGCTGTGCCCTGGATATGAACTTGCGAGGGTT
GAGCTCTCTGTTTTTCTTCACCACTTAGTTACTCGTTTCAGCTGGGTACC
AGCTGAACAAGATAAGTTGGTATTCTTTTCAACAACAAGAACCCAGAAGA
GGTACCCCATCATTGTGCACGTCGAAATGAAAGTTAAAGCCCTGTAAAGA
ATAAAGGAGAACCAGCAGGGTGGAGTAAGAAATGCTAAA
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