BQ623115

Overview
NameBQ623115
Unique NameBQ623115
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length551
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig642 contig Csv1_Contig642:47..597. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623115 vs. ExPASy Swiss-Prot
Match: ADH1_YEAST (Alcohol dehydrogenase 1 OS=Saccharomyces cerevisiae GN=ADH1 PE=1 SV=4)

HSP 1 Score: 69.3218 bits (168), Expect = 1.369e-11
Identity = 35/107 (32.71%), Postives = 57/107 (53.27%), Query Frame = 3
Query:  177 TCKAAVAWEPNKALVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGL-FPCILGHEAAGIVESVGEGVTEVQPGDHV-IPCYQAECRECKFCKSGKTNLC 491
            T K  + +E +  L  +D+ V  P+A E+ I + ++ +CHTD + W G  P  +  P + GHE AG+V  +GE V   + GD+  I      C  C++C+ G  + C
Sbjct:    6 TQKGVIFYESHGKLEHKDIPVPKPKANELLINVKYSGVCHTDLHAWHGDWPLPVKLPLVGGHEGAGVVVGMGENVKGWKIGDYAGIKWLNGSCMACEYCELGNESNC 112          
BLAST of BQ623115 vs. ExPASy Swiss-Prot
Match: YJMD_BACSU (Uncharacterized zinc-type alcohol dehydrogenase-like protein yjmD OS=Bacillus subtilis GN=yjmD PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 2.335e-11
Identity = 29/81 (35.80%), Postives = 47/81 (58.02%), Query Frame = 3
Query:  258 EVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKV 500
            EV +K+    +C +D + + G +P    P ++GHE  G VE+VG  V  ++PGDHV+    + C  C  C+ G+ N+C K+
Sbjct:   27 EVLVKVKRVGICGSDMHIYHGTNPLATLPRVIGHEVTGQVEAVGANVQSLKPGDHVVIEPISYCGSCYACRKGRPNVCAKL 107          
BLAST of BQ623115 vs. ExPASy Swiss-Prot
Match: CADH3_ORYSJ (Probable cinnamyl alcohol dehydrogenase 3 OS=Oryza sativa subsp. japonica GN=CAD3 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 3.050e-11
Identity = 31/79 (39.24%), Postives = 45/79 (56.96%), Query Frame = 3
Query:  258 EVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHV-IPCYQAECRECKFCKSGKTNLC 491
            +V IKILF  +CH+D +    +    ++P + GHE AG+V  VG+ VT  + GD V + C    CR C+ C +G  N C
Sbjct:   42 DVAIKILFCGICHSDLHCIKNEWKHSIYPLVPGHEIAGVVTEVGKNVTRFKAGDRVGVGCMVNSCRSCESCNNGFENHC 120          
BLAST of BQ623115 vs. ExPASy Swiss-Prot
Match: YAHK_ECOLI (Uncharacterized zinc-type alcohol dehydrogenase-like protein yahK OS=Escherichia coli (strain K12) GN=yahK PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 3.984e-11
Identity = 34/109 (31.19%), Postives = 56/109 (51.38%), Query Frame = 3
Query:  183 KAAVAWEPNKALVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHV-IPCYQAECRECKFCKSGKTNLCGKVRG 506
            KA  A+   + L   D+    P   +V+I+I +  +CH+D +    +    ++PC+ GHE  G V +VG+ V +  PGD V + C    C+ C+ C+ G  N C  + G
Sbjct:    4 KAVGAYSAKQPLEPMDITRREPGPNDVKIEIAYCGVCHSDLHQVRSEWAGTVYPCVPGHEIVGRVVAVGDQVEKYAPGDLVGVGCIVDSCKHCEECEDGLENYCDHMTG 112          
BLAST of BQ623115 vs. ExPASy Swiss-Prot
Match: ADH1_KLUMA (Alcohol dehydrogenase 1 OS=Kluyveromyces marxianus GN=ADH1 PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 3.984e-11
Identity = 36/109 (33.03%), Postives = 55/109 (50.46%), Query Frame = 3
Query:  177 TCKAAVAWEPNKALVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDP-EGLFPCILGHEAAGIVESVGEGVTEVQPGDHV-IPCYQAECRECKFCKSGKTNLCGK 497
            T K  + +E    L  +D+ V  P+  E+ I + ++ +CHTD + W G  P +   P + GHE AGIV ++GE VT  + GD+  I      C  C+ C+      C K
Sbjct:    6 TQKGVIFYEHGGELQYKDIPVPKPKPNELLINVKYSGVCHTDLHAWQGDWPLDTKLPLVGGHEGAGIVVAMGENVTGWEIGDYAGIKWLNGSCMSCEECELSNEPNCPK 114          
BLAST of BQ623115 vs. ExPASy Swiss-Prot
Match: ADH3_YEAST (Alcohol dehydrogenase 3, mitochondrial OS=Saccharomyces cerevisiae GN=ADH3 PE=1 SV=2)

HSP 1 Score: 67.3958 bits (163), Expect = 5.203e-11
Identity = 35/107 (32.71%), Postives = 54/107 (50.47%), Query Frame = 3
Query:  177 TCKAAVAWEPNKALVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGL-FPCILGHEAAGIVESVGEGVTEVQPGDHV-IPCYQAECRECKFCKSGKTNLC 491
            T K  + +E    L  +D+ V  P+  E+ I + ++ +CHTD + W G  P  +  P + GHE AG+V  +G  V   + GD   I      C  C+FC+SG  + C
Sbjct:   33 TQKGVIFYENKGKLHYKDIPVPEPKPNEILINVKYSGVCHTDLHAWHGDWPLPVKLPLVGGHEGAGVVVKLGSNVKGWKVGDLAGIKWLNGSCMTCEFCESGHESNC 139          
BLAST of BQ623115 vs. ExPASy Swiss-Prot
Match: ADH1_ASPFN (Alcohol dehydrogenase 1 OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / NRRL 3357 / JCM 12722 / SRRC 167) GN=adh1 PE=2 SV=2)

HSP 1 Score: 67.3958 bits (163), Expect = 5.203e-11
Identity = 35/104 (33.65%), Postives = 54/104 (51.92%), Query Frame = 3
Query:  186 AAVAWEPNKALVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGL-FPCILGHEAAGIVESVGEGVTEVQPGDHV-IPCYQAECRECKFCKSGKTNLC 491
            A VA +    L+ + + V  P   E+ +K+ ++ +CHTD +   G  P  +  P + GHE AG+V + G+ VTE + GDH  +      C  C+FCK     LC
Sbjct:    9 AQVAEQKGGPLIYKQIPVPKPGPDEILVKVRYSGVCHTDLHALKGDWPLPVKMPLVGGHEGAGVVVARGDLVTEFEIGDHAGLKWLNGSCLACEFCKQADEPLC 112          
BLAST of BQ623115 vs. ExPASy Swiss-Prot
Match: ADHB_BACSU (Uncharacterized zinc-type alcohol dehydrogenase-like protein adhB OS=Bacillus subtilis GN=adhB PE=3 SV=2)

HSP 1 Score: 67.0106 bits (162), Expect = 6.795e-11
Identity = 37/102 (36.27%), Postives = 58/102 (56.86%), Query Frame = 3
Query:  189 AVAWEPNKALVIEDVQVAP-PQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLC 491
            AV ++  K +V++DV      ++ ++ IK+  TA+C +D +   G  P      ++GHE  GIVE VG GVT+++ GD VI  +   C EC FCK+   + C
Sbjct:    3 AVTYQGIKNVVVKDVPDPKIEKSDDMIIKVTSTAICGSDLHLIHGFIPNMQEDYVIGHEPMGIVEEVGSGVTKLKKGDRVIIPFNIACGECFFCKNQLESQC 104          
BLAST of BQ623115 vs. ExPASy Swiss-Prot
Match: ADH1_ZYMMO (Alcohol dehydrogenase 1 OS=Zymomonas mobilis GN=adhA PE=1 SV=2)

HSP 1 Score: 66.6254 bits (161), Expect = 8.875e-11
Identity = 39/112 (34.82%), Postives = 61/112 (54.46%), Query Frame = 3
Query:  183 KAAVAWEPNKALVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGK--DPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHV-IPCYQAECRECKFCKSGKTNLCGKVRGA 509
            KAAV  + +  + ++D ++ P + GE  +++ +  +CHTD +  +G   D  G    I GHE  GIV+ VGEGVT ++ GD   +  +   C  C++C SG   LC  V  A
Sbjct:    2 KAAVITKDH-TIEVKDTKLRPLKYGEALLEMEYCGVCHTDLHVKNGDFGDETGR---ITGHEGIGIVKQVGEGVTSLKVGDRASVAWFFKGCGHCEYCVSGNETLCRNVENA 109          
BLAST of BQ623115 vs. ExPASy Swiss-Prot
Match: ADH1_KLULA (Alcohol dehydrogenase 1 OS=Kluyveromyces lactis GN=ADH1 PE=3 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 8.875e-11
Identity = 34/107 (31.78%), Postives = 54/107 (50.47%), Query Frame = 3
Query:  177 TCKAAVAWEPNKALVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDP-EGLFPCILGHEAAGIVESVGEGVTEVQPGDHV-IPCYQAECRECKFCKSGKTNLC 491
            T K  + +E    L  +D+ V  P+A E+ I + ++ +CHTD + W G  P     P + GHE AG+V ++GE V   + GD   I      C  C++C+    + C
Sbjct:    8 TQKGVIFYENGGELQYKDIPVPKPKANELLINVKYSGVCHTDLHAWKGDWPLPTKLPLVGGHEGAGVVVAMGENVKGWKIGDFAGIKWLNGSCMSCEYCELSNESNC 114          
The following BLAST results are available for this feature:
BLAST of BQ623115 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 140
Match NameE-valueIdentityDescription
ADH1_YEAST1.369e-1132.71Alcohol dehydrogenase 1 OS=Saccharomyces cerevisia... [more]
YJMD_BACSU2.335e-1135.80Uncharacterized zinc-type alcohol dehydrogenase-li... [more]
CADH3_ORYSJ3.050e-1139.24Probable cinnamyl alcohol dehydrogenase 3 OS=Oryza... [more]
YAHK_ECOLI3.984e-1131.19Uncharacterized zinc-type alcohol dehydrogenase-li... [more]
ADH1_KLUMA3.984e-1133.03Alcohol dehydrogenase 1 OS=Kluyveromyces marxianus... [more]
ADH3_YEAST5.203e-1132.71Alcohol dehydrogenase 3, mitochondrial OS=Saccharo... [more]
ADH1_ASPFN5.203e-1133.65Alcohol dehydrogenase 1 OS=Aspergillus flavus (str... [more]
ADHB_BACSU6.795e-1136.27Uncharacterized zinc-type alcohol dehydrogenase-li... [more]
ADH1_ZYMMO8.875e-1134.82Alcohol dehydrogenase 1 OS=Zymomonas mobilis GN=ad... [more]
ADH1_KLULA8.875e-1131.78Alcohol dehydrogenase 1 OS=Kluyveromyces lactis GN... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00206 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00206 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623115 ID=BQ623115; Name=BQ623115; organism=Citrus sinensis; type=EST; length=551bp
AATAGAGGGAGCTACTTTAGAAAAATCTCACCTCTGTTGCCGGCAGCCAC
TCTCAGATCGTGTCACGTCCCTTTTGAATAATAATATCTATCTGCATCTA
CTCGTTTCTTTTTGTGGTCTGTTTTTCATTCTCATTTTCATTGTCAGCAG
CCATGTCTACTGAAGGTCAAGTCATCACATGCAAAGCGGCGGTGGCCTGG
GAACCCAACAAGGCATTGGTGATTGAGGATGTGCAGGTTGCTCCGCCTCA
GGCTGGCGAGGTCCGAATCAAGATTCTCTTCACTGCTCTCTGCCACACTG
ATGCTTACACCTGGAGCGGCAAGGATCCTGAAGGTCTCTTCCCCTGTATC
CTAGGTCATGAGGCTGCTGGGATTGTGGAGAGTGTTGGTGAAGGTGTGAC
CGAGGTTCAACCAGGTGATCATGTCATCCCTTGTTACCAGGCAGAATGCC
GAGAGTGCAAGTTTTGCAAGTCTGGAAAGACTAACCTCTGTGGTAAGGTT
AGGGGTGCCACTGGTGCTGGTGTCATGATGAATGACCGCAAGAGCCGTTT
C
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