BQ623115

Overview
NameBQ623115
Unique NameBQ623115
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length551
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig642 contig Csv1_Contig642:47..597. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623115 vs. ExPASy Swiss-Prot
Match: FADH2_SCHPO (Putative S-(hydroxymethyl)glutathione dehydrogenase 2 OS=Schizosaccharomyces pombe GN=SPCC13B11.04c PE=2 SV=2)

HSP 1 Score: 175.637 bits (444), Expect = 1.357e-43
Identity = 87/131 (66.41%), Postives = 99/131 (75.57%), Query Frame = 3
Query:  159 TEGQVITCKAAVAWEPNKALVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRF 551
            T G++I CKAAVAW+P   L IE+VQV PP+  EVRIKI+ + +CHTDAYT SGKDPEGLFP ILGHE AGIVESVG  VT VQ GD VI  Y  EC+ CKFCKSGKTNLCG++R   G G +M D  SRF
Sbjct:    6 TAGKIINCKAAVAWQPAAPLSIENVQVFPPRVHEVRIKIVNSGVCHTDAYTLSGKDPEGLFPVILGHEGAGIVESVGPQVTTVQVGDPVIALYTPECKTCKFCKSGKTNLCGRIRTTQGKG-LMPDGTSRF 135          
BLAST of BQ623115 vs. ExPASy Swiss-Prot
Match: ADH1_PETHY (Alcohol dehydrogenase 1 OS=Petunia hybrida GN=ADH1 PE=3 SV=1)

HSP 1 Score: 175.637 bits (444), Expect = 1.357e-43
Identity = 81/132 (61.36%), Postives = 102/132 (77.27%), Query Frame = 3
Query:  156 STEGQVITCKAAVAWEPNKALVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRF 551
            +T GQVI CKAAVAWE  K LVIE+V+VAPPQ  EVR+KILFT+LCHTD Y W  K    LFP I GHEA GIVESVGEGVT+++PGDHV+P +  EC++C+ CKS ++N+C  +R  T  GVM++D ++RF
Sbjct:    4 NTAGQVIRCKAAVAWEAGKPLVIEEVEVAPPQKMEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLKPGDHVLPVFTGECQQCRHCKSEESNMCDLLRINTDRGVMIHDGQTRF 135          
BLAST of BQ623115 vs. ExPASy Swiss-Prot
Match: ADH3_HORVU (Alcohol dehydrogenase 3 OS=Hordeum vulgare GN=ADH3 PE=3 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 1.772e-43
Identity = 83/133 (62.41%), Postives = 100/133 (75.19%), Query Frame = 3
Query:  153 MSTEGQVITCKAAVAWEPNKALVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRF 551
            M+T G+VI CKAAVAWE  K L IE+V+VAPPQA EVR+KIL+TALCHTD Y W  K    +FP ILGHEA GIVESVGEGVTE+ PGDHV+P +  EC++C  CKS ++NLC  +R     GVM+ D +SRF
Sbjct:    1 MATAGKVIKCKAAVAWEAGKPLSIEEVEVAPPQAMEVRVKILYTALCHTDVYFWEAKGQTPVFPRILGHEAGGIVESVGEGVTELVPGDHVLPVFTGECKDCAHCKSEESNLCDLLRINVDRGVMIGDGQSRF 133          
BLAST of BQ623115 vs. ExPASy Swiss-Prot
Match: ADH2_MAIZE (Alcohol dehydrogenase 2 OS=Zea mays GN=ADH2 PE=2 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 1.772e-43
Identity = 83/133 (62.41%), Postives = 99/133 (74.44%), Query Frame = 3
Query:  153 MSTEGQVITCKAAVAWEPNKALVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRF 551
            M+T G+VI C+AAV WE  K L IE+V+VAPPQA EVRIKIL+TALCHTD Y W  K    +FP ILGHEA GIVESVGEGVT+V PGDHV+P +  EC+EC  CKS ++N+C  +R     GVM+ D KSRF
Sbjct:    1 MATAGKVIKCRAAVTWEAGKPLSIEEVEVAPPQAMEVRIKILYTALCHTDVYFWEAKGQTPVFPRILGHEAGGIVESVGEGVTDVAPGDHVLPVFTGECKECAHCKSEESNMCDLLRINVDRGVMIGDGKSRF 133          
BLAST of BQ623115 vs. ExPASy Swiss-Prot
Match: ADHX_RAT (Alcohol dehydrogenase class-3 OS=Rattus norvegicus GN=Adh5 PE=1 SV=2)

HSP 1 Score: 174.866 bits (442), Expect = 2.314e-43
Identity = 87/128 (67.97%), Postives = 99/128 (77.34%), Query Frame = 3
Query:  168 QVITCKAAVAWEPNKALVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRF 551
            QVI CKAAVAWE  K L IE+++VAPPQA EVRIKI+ TA+CHTDAYT SG DPEG FP ILGHE AGIVESVGEGVT+++ GD VIP Y  +C ECKFC + KTNLC K+R   G G +M D  SRF
Sbjct:    4 QVIRCKAAVAWEAGKPLSIEEIEVAPPQAHEVRIKIIATAVCHTDAYTLSGADPEGCFPVILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKG-LMPDGTSRF 130          
BLAST of BQ623115 vs. ExPASy Swiss-Prot
Match: ADHX_MYXGL (Alcohol dehydrogenase class-3 OS=Myxine glutinosa PE=1 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 2.314e-43
Identity = 85/129 (65.89%), Postives = 100/129 (77.52%), Query Frame = 3
Query:  162 EGQVITCKAAVAWEPNKALVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSR 548
            +GQVI CKAAVAWE  K L +E+++VAPP+A EVR+K+L TA+CHTDAYT SG DPEG FP +LGHE AGIVESVGEGVT+ +PGD VIP Y  +C ECKFC + KTNLC K+R   G G MM D  SR
Sbjct:    4 DGQVIHCKAAVAWEAKKPLSLEEIEVAPPKAHEVRMKVLATAVCHTDAYTLSGVDPEGSFPVVLGHEGAGIVESVGEGVTKFKPGDSVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKG-MMPDGTSR 131          
BLAST of BQ623115 vs. ExPASy Swiss-Prot
Match: ADHX_MOUSE (Alcohol dehydrogenase class-3 OS=Mus musculus GN=Adh5 PE=1 SV=3)

HSP 1 Score: 174.096 bits (440), Expect = 3.947e-43
Identity = 87/128 (67.97%), Postives = 99/128 (77.34%), Query Frame = 3
Query:  168 QVITCKAAVAWEPNKALVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRF 551
            QVI CKAAVAWE  K L IE+++VAPP+A EVRIKIL TA+CHTDAYT SG DPEG FP ILGHE AGIVESVGEGVT+++ GD VIP Y  +C ECKFC + KTNLC K+R   G G +M D  SRF
Sbjct:    4 QVIRCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKILATAVCHTDAYTLSGADPEGCFPVILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKG-LMPDGTSRF 130          
BLAST of BQ623115 vs. ExPASy Swiss-Prot
Match: ADHX_UROHA (Alcohol dehydrogenase class-3 OS=Uromastyx hardwickii PE=1 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 5.155e-43
Identity = 86/127 (67.72%), Postives = 98/127 (77.17%), Query Frame = 3
Query:  171 VITCKAAVAWEPNKALVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRF 551
            VI CKAAVAWE  K L IE+++VAPP+A EVR+KI+ TA+CHTDAYT SG DPEG FP ILGHE AGIVESVGEGVT+ +PGD VIP Y  +C ECKFC + KTNLC K+R   G GV M D  SRF
Sbjct:    4 VIKCKAAVAWEAGKPLSIEEIEVAPPKAHEVRVKIIATAVCHTDAYTLSGADPEGSFPVILGHEGAGIVESVGEGVTKFKPGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGV-MPDGTSRF 129          
BLAST of BQ623115 vs. ExPASy Swiss-Prot
Match: ADHX_HUMAN (Alcohol dehydrogenase class-3 OS=Homo sapiens GN=ADH5 PE=1 SV=4)

HSP 1 Score: 172.17 bits (435), Expect = 1.500e-42
Identity = 85/128 (66.41%), Postives = 99/128 (77.34%), Query Frame = 3
Query:  168 QVITCKAAVAWEPNKALVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRF 551
            +VI CKAAVAWE  K L IE+++VAPP+A EVRIKI+ TA+CHTDAYT SG DPEG FP ILGHE AGIVESVGEGVT+++ GD VIP Y  +C ECKFC + KTNLC K+R   G G +M D  SRF
Sbjct:    4 EVIKCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGCFPVILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKG-LMPDGTSRF 130          
BLAST of BQ623115 vs. ExPASy Swiss-Prot
Match: ADHX_OCTVU (Alcohol dehydrogenase class-3 OS=Octopus vulgaris PE=1 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 1.959e-42
Identity = 83/129 (64.34%), Postives = 98/129 (75.97%), Query Frame = 3
Query:  165 GQVITCKAAVAWEPNKALVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRF 551
            G+ I C AA+AWE  K L IE+V+VAPP++GEVRIKIL + +CHTDAYT  G DPEG+FP ILGHE AGIVES+GEGVT V+PGD VIP Y  +C ECKFC + KTNLC K+R   G GV M D  +RF
Sbjct:    5 GKPIKCMAAIAWEAKKPLSIEEVEVAPPKSGEVRIKILHSGVCHTDAYTLEGIDPEGIFPVILGHEGAGIVESIGEGVTSVKPGDTVIPLYVPQCYECKFCLNPKTNLCQKIRVTQGKGV-MPDGTTRF 132          
The following BLAST results are available for this feature:
BLAST of BQ623115 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 140
Match NameE-valueIdentityDescription
FADH2_SCHPO1.357e-4366.41Putative S-(hydroxymethyl)glutathione dehydrogenas... [more]
ADH1_PETHY1.357e-4361.36Alcohol dehydrogenase 1 OS=Petunia hybrida GN=ADH1... [more]
ADH3_HORVU1.772e-4362.41Alcohol dehydrogenase 3 OS=Hordeum vulgare GN=ADH3... [more]
ADH2_MAIZE1.772e-4362.41Alcohol dehydrogenase 2 OS=Zea mays GN=ADH2 PE=2 S... [more]
ADHX_RAT2.314e-4367.97Alcohol dehydrogenase class-3 OS=Rattus norvegicus... [more]
ADHX_MYXGL2.314e-4365.89Alcohol dehydrogenase class-3 OS=Myxine glutinosa ... [more]
ADHX_MOUSE3.947e-4367.97Alcohol dehydrogenase class-3 OS=Mus musculus GN=A... [more]
ADHX_UROHA5.155e-4367.72Alcohol dehydrogenase class-3 OS=Uromastyx hardwic... [more]
ADHX_HUMAN1.500e-4266.41Alcohol dehydrogenase class-3 OS=Homo sapiens GN=A... [more]
ADHX_OCTVU1.959e-4264.34Alcohol dehydrogenase class-3 OS=Octopus vulgaris ... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00206 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00206 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623115 ID=BQ623115; Name=BQ623115; organism=Citrus sinensis; type=EST; length=551bp
AATAGAGGGAGCTACTTTAGAAAAATCTCACCTCTGTTGCCGGCAGCCAC
TCTCAGATCGTGTCACGTCCCTTTTGAATAATAATATCTATCTGCATCTA
CTCGTTTCTTTTTGTGGTCTGTTTTTCATTCTCATTTTCATTGTCAGCAG
CCATGTCTACTGAAGGTCAAGTCATCACATGCAAAGCGGCGGTGGCCTGG
GAACCCAACAAGGCATTGGTGATTGAGGATGTGCAGGTTGCTCCGCCTCA
GGCTGGCGAGGTCCGAATCAAGATTCTCTTCACTGCTCTCTGCCACACTG
ATGCTTACACCTGGAGCGGCAAGGATCCTGAAGGTCTCTTCCCCTGTATC
CTAGGTCATGAGGCTGCTGGGATTGTGGAGAGTGTTGGTGAAGGTGTGAC
CGAGGTTCAACCAGGTGATCATGTCATCCCTTGTTACCAGGCAGAATGCC
GAGAGTGCAAGTTTTGCAAGTCTGGAAAGACTAACCTCTGTGGTAAGGTT
AGGGGTGCCACTGGTGCTGGTGTCATGATGAATGACCGCAAGAGCCGTTT
C
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