BQ623115

Overview
NameBQ623115
Unique NameBQ623115
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length551
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig642 contig Csv1_Contig642:47..597. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623115 vs. ExPASy Swiss-Prot
Match: FRMA_ECOL5 (S-(hydroxymethyl)glutathione dehydrogenase OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=frmA PE=3 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 5.898e-39
Identity = 76/123 (61.79%), Postives = 92/123 (74.80%), Query Frame = 3
Query:  183 KAAVAWEPNKALVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRF 551
            +AAVA+ P K L I ++ VAPP+ GEV IK+  T +CHTDA+T SG DPEG+FP +LGHE AG+V  VGEGVT V+PGDHVIP Y AEC EC+FC+SGKTNLC  VR   G G +M D  +RF
Sbjct:    4 RAAVAFAPGKPLEIVEIDVAPPKKGEVLIKVTHTGVCHTDAFTLSGDDPEGVFPVVLGHEGAGVVVEVGEGVTSVKPGDHVIPLYTAECGECEFCRSGKTNLCVAVRETQGKG-LMPDGTTRF 125          
BLAST of BQ623115 vs. ExPASy Swiss-Prot
Match: FRMA_ECOK1 (S-(hydroxymethyl)glutathione dehydrogenase OS=Escherichia coli O1:K1 / APEC GN=frmA PE=3 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 5.898e-39
Identity = 76/123 (61.79%), Postives = 92/123 (74.80%), Query Frame = 3
Query:  183 KAAVAWEPNKALVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRF 551
            +AAVA+ P K L I ++ VAPP+ GEV IK+  T +CHTDA+T SG DPEG+FP +LGHE AG+V  VGEGVT V+PGDHVIP Y AEC EC+FC+SGKTNLC  VR   G G +M D  +RF
Sbjct:    4 RAAVAFAPGKPLEIVEIDVAPPKKGEVLIKVTHTGVCHTDAFTLSGDDPEGVFPVVLGHEGAGVVVEVGEGVTSVKPGDHVIPLYTAECGECEFCRSGKTNLCVAVRETQGKG-LMPDGTTRF 125          
BLAST of BQ623115 vs. ExPASy Swiss-Prot
Match: FRMA_ECOHS (S-(hydroxymethyl)glutathione dehydrogenase OS=Escherichia coli O9:H4 (strain HS) GN=frmA PE=3 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 5.898e-39
Identity = 76/123 (61.79%), Postives = 92/123 (74.80%), Query Frame = 3
Query:  183 KAAVAWEPNKALVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRF 551
            +AAVA+ P K L I ++ VAPP+ GEV IK+  T +CHTDA+T SG DPEG+FP +LGHE AG+V  VGEGVT V+PGDHVIP Y AEC EC+FC+SGKTNLC  VR   G G +M D  +RF
Sbjct:    4 RAAVAFAPGKPLEIVEIDVAPPKKGEVLIKVTHTGVCHTDAFTLSGDDPEGVFPVVLGHEGAGVVVEVGEGVTSVKPGDHVIPLYTAECGECEFCRSGKTNLCVAVRETQGKG-LMPDGTTRF 125          
BLAST of BQ623115 vs. ExPASy Swiss-Prot
Match: FRMA_ECO57 (S-(hydroxymethyl)glutathione dehydrogenase OS=Escherichia coli O157:H7 GN=frmA PE=3 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 5.898e-39
Identity = 76/123 (61.79%), Postives = 92/123 (74.80%), Query Frame = 3
Query:  183 KAAVAWEPNKALVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRF 551
            +AAVA+ P K L I ++ VAPP+ GEV IK+  T +CHTDA+T SG DPEG+FP +LGHE AG+V  VGEGVT V+PGDHVIP Y AEC EC+FC+SGKTNLC  VR   G G +M D  +RF
Sbjct:    4 RAAVAFAPGKPLEIVEIDVAPPKKGEVLIKVTHTGVCHTDAFTLSGDDPEGVFPVVLGHEGAGVVVEVGEGVTSVKPGDHVIPLYTAECGECEFCRSGKTNLCVAVRETQGKG-LMPDGTTRF 125          
BLAST of BQ623115 vs. ExPASy Swiss-Prot
Match: FRMA_ECO24 (S-(hydroxymethyl)glutathione dehydrogenase OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=frmA PE=3 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 5.898e-39
Identity = 76/123 (61.79%), Postives = 92/123 (74.80%), Query Frame = 3
Query:  183 KAAVAWEPNKALVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRF 551
            +AAVA+ P K L I ++ VAPP+ GEV IK+  T +CHTDA+T SG DPEG+FP +LGHE AG+V  VGEGVT V+PGDHVIP Y AEC EC+FC+SGKTNLC  VR   G G +M D  +RF
Sbjct:    4 RAAVAFAPGKPLEIVEIDVAPPKKGEVLIKVTHTGVCHTDAFTLSGDDPEGVFPVVLGHEGAGVVVEVGEGVTSVKPGDHVIPLYTAECGECEFCRSGKTNLCVAVRETQGKG-LMPDGTTRF 125          
BLAST of BQ623115 vs. ExPASy Swiss-Prot
Match: FRMA_SYNY3 (S-(hydroxymethyl)glutathione dehydrogenase OS=Synechocystis sp. (strain PCC 6803) GN=frmA PE=3 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 7.703e-39
Identity = 80/123 (65.04%), Postives = 90/123 (73.17%), Query Frame = 3
Query:  183 KAAVAWEPNKALVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRF 551
            +AAVA+E  K L I ++ VAPPQ GEV +KI  T +CHTDA+T SG DPEGLFP +LGHE AGIV  VGEGVT VQ GDHVIP Y AEC +C FC+SGKTNLC  VR   G GV M D  SRF
Sbjct:    4 RAAVAFEVGKPLQIVEIDVAPPQQGEVLVKITHTGVCHTDAFTLSGDDPEGLFPVVLGHEGAGIVVEVGEGVTSVQLGDHVIPLYTAECGKCLFCRSGKTNLCVAVRATQGKGV-MPDGTSRF 125          
BLAST of BQ623115 vs. ExPASy Swiss-Prot
Match: FRMA_PASPI (S-(hydroxymethyl)glutathione dehydrogenase OS=Pasteurella piscicida GN=frmA PE=3 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 7.703e-39
Identity = 79/123 (64.23%), Postives = 89/123 (72.36%), Query Frame = 3
Query:  183 KAAVAWEPNKALVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRF 551
            +AAVA+ P   L I ++ VAPP+ GEV +KI  T +CHTDAYT SG DPEGLFP +LGHE AG+V  VGEGVT V+PGDHVIP Y AEC EC FC SGKTNLC  VR   G GV M D  SRF
Sbjct:    4 RAAVAFGPGLPLEIVEIDVAPPKKGEVLVKISHTGVCHTDAYTLSGDDPEGLFPVVLGHEGAGVVVEVGEGVTSVKPGDHVIPLYTAECGECDFCTSGKTNLCVAVRETQGKGV-MPDATSRF 125          
BLAST of BQ623115 vs. ExPASy Swiss-Prot
Match: FRMA_ECOL6 (S-(hydroxymethyl)glutathione dehydrogenase OS=Escherichia coli O6 GN=frmA PE=3 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 1.112e-37
Identity = 74/123 (60.16%), Postives = 90/123 (73.17%), Query Frame = 3
Query:  183 KAAVAWEPNKALVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRF 551
            +AAVA+ P K L I ++ VAPP+ GEV IK+  T +CHTDA+T SG DPEG+FP +LGHE AG+V  VGEGVT V+PGDHVIP Y   C EC+FC+SGKTNLC  VR   G G +M D  +RF
Sbjct:    4 RAAVAFAPGKPLEIVEIDVAPPKKGEVLIKVTHTGVCHTDAFTLSGDDPEGVFPVVLGHEGAGVVVEVGEGVTSVKPGDHVIPLYTEXCGECEFCRSGKTNLCVAVRETQGKG-LMPDGTTRF 125          
BLAST of BQ623115 vs. ExPASy Swiss-Prot
Match: ADH4_HUMAN (Alcohol dehydrogenase 4 OS=Homo sapiens GN=ADH4 PE=1 SV=4)

HSP 1 Score: 155.221 bits (391), Expect = 1.897e-37
Identity = 78/136 (57.35%), Postives = 95/136 (69.85%), Query Frame = 3
Query:  153 MSTEGQVITCKAAVAWEPNKALVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKV---RGATGAGVMMNDRKSRF 551
            M T+G+VI CKAA+AWE  K L IE+V+VAPP+A EVRI+I+ T+LCHTDA     K     FP I+GHEAAGIVES+G GVT V+PGD VIP Y   CR+CKFC S  TNLCGK+   +       +M D+ SRF
Sbjct:    1 MGTKGKVIKCKAAIAWEAGKPLCIEEVEVAPPKAHEVRIQIIATSLCHTDATVIDSKFEGLAFPVIVGHEAAGIVESIGPGVTNVKPGDKVIPLYAPLCRKCKFCLSPLTNLCGKISNLKSPASDQQLMEDKTSRF 136          
BLAST of BQ623115 vs. ExPASy Swiss-Prot
Match: ADHL4_ARATH (Alcohol dehydrogenase-like 4 OS=Arabidopsis thaliana GN=At1g64710 PE=2 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 4.227e-37
Identity = 75/134 (55.97%), Postives = 95/134 (70.90%), Query Frame = 3
Query:  153 MSTEGQVITCKAAVAWEPNKALVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGK-DPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRF 551
            M T+G+VITCKAAVAW   + LV+EDV+V PPQ  EVRI+ILFT++CHTD   W G+ + +  +P ILGHEAAGIVESVGEGV E+  GDHV+P +  EC +C+ CK    NLC + R      VM+ D K+RF
Sbjct:    1 METQGKVITCKAAVAWGAGEPLVMEDVKVDPPQRLEVRIRILFTSICHTDLSAWKGENEAQRAYPRILGHEAAGIVESVGEGVEEMMAGDHVLPIFTGECGDCRVCKRDGANLCERFRVDPMKKVMVTDGKTRF 134          
The following BLAST results are available for this feature:
BLAST of BQ623115 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 140
Match NameE-valueIdentityDescription
FRMA_ECOL55.898e-3961.79S-(hydroxymethyl)glutathione dehydrogenase OS=Esch... [more]
FRMA_ECOK15.898e-3961.79S-(hydroxymethyl)glutathione dehydrogenase OS=Esch... [more]
FRMA_ECOHS5.898e-3961.79S-(hydroxymethyl)glutathione dehydrogenase OS=Esch... [more]
FRMA_ECO575.898e-3961.79S-(hydroxymethyl)glutathione dehydrogenase OS=Esch... [more]
FRMA_ECO245.898e-3961.79S-(hydroxymethyl)glutathione dehydrogenase OS=Esch... [more]
FRMA_SYNY37.703e-3965.04S-(hydroxymethyl)glutathione dehydrogenase OS=Syne... [more]
FRMA_PASPI7.703e-3964.23S-(hydroxymethyl)glutathione dehydrogenase OS=Past... [more]
FRMA_ECOL61.112e-3760.16S-(hydroxymethyl)glutathione dehydrogenase OS=Esch... [more]
ADH4_HUMAN1.897e-3757.35Alcohol dehydrogenase 4 OS=Homo sapiens GN=ADH4 PE... [more]
ADHL4_ARATH4.227e-3755.97Alcohol dehydrogenase-like 4 OS=Arabidopsis thalia... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00206 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00206 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623115 ID=BQ623115; Name=BQ623115; organism=Citrus sinensis; type=EST; length=551bp
AATAGAGGGAGCTACTTTAGAAAAATCTCACCTCTGTTGCCGGCAGCCAC
TCTCAGATCGTGTCACGTCCCTTTTGAATAATAATATCTATCTGCATCTA
CTCGTTTCTTTTTGTGGTCTGTTTTTCATTCTCATTTTCATTGTCAGCAG
CCATGTCTACTGAAGGTCAAGTCATCACATGCAAAGCGGCGGTGGCCTGG
GAACCCAACAAGGCATTGGTGATTGAGGATGTGCAGGTTGCTCCGCCTCA
GGCTGGCGAGGTCCGAATCAAGATTCTCTTCACTGCTCTCTGCCACACTG
ATGCTTACACCTGGAGCGGCAAGGATCCTGAAGGTCTCTTCCCCTGTATC
CTAGGTCATGAGGCTGCTGGGATTGTGGAGAGTGTTGGTGAAGGTGTGAC
CGAGGTTCAACCAGGTGATCATGTCATCCCTTGTTACCAGGCAGAATGCC
GAGAGTGCAAGTTTTGCAAGTCTGGAAAGACTAACCTCTGTGGTAAGGTT
AGGGGTGCCACTGGTGCTGGTGTCATGATGAATGACCGCAAGAGCCGTTT
C
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