BQ623115

Overview
NameBQ623115
Unique NameBQ623115
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length551
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig642 contig Csv1_Contig642:47..597. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623115 vs. ExPASy Swiss-Prot
Match: ADH1_GEOAT (Alcohol dehydrogenase 1 OS=Geomys attwateri GN=ADH1 PE=2 SV=3)

HSP 1 Score: 132.109 bits (331), Expect = 1.720e-30
Identity = 70/133 (52.63%), Postives = 89/133 (66.92%), Query Frame = 3
Query:  153 MSTEGQVITCKAAVAWEPNKALVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRF 551
            MST G+VI C+AAV WE NK   IE+V+VAPP+A EVRIKI+ T +C +D +  +G     L P ILGHEA GIVES+GEGVT V+PGD VIP +  +C +C+ CK  ++NLC         G +M D  SRF
Sbjct:    1 MSTAGKVIKCRAAVLWEKNKPFSIEEVEVAPPKAYEVRIKIVATGICRSDDHVVNGSIITPL-PAILGHEAGGIVESIGEGVTTVKPGDKVIPLFVPQCGKCRACKHPESNLCTHGDLGRAQGTLM-DGTSRF 131          
BLAST of BQ623115 vs. ExPASy Swiss-Prot
Match: ADH1A_UROHA (Alcohol dehydrogenase 1A OS=Uromastyx hardwickii PE=1 SV=2)

HSP 1 Score: 132.109 bits (331), Expect = 1.720e-30
Identity = 72/133 (54.14%), Postives = 90/133 (67.67%), Query Frame = 3
Query:  159 TEGQVITCKAAVAWEPNKALVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLC--GKVRGATGAGVMMNDRKSRF 551
            T G+VI CKAA+AWE  K L IE ++VAPP+A EVRIKIL T +C +D +  SG     L P +LGHEAAG+VESVGEGVT V+PGD VIP +  +C +C  C+S + NLC    +  ATG   +M D  SRF
Sbjct:    2 TAGKVIKCKAAIAWEIKKPLSIEQIEVAPPKAHEVRIKILATGICRSDDHVISGAFKMPL-PMVLGHEAAGVVESVGEGVTCVKPGDKVIPLFVPQCGKCSSCRSTRGNLCTSNDLSAATG---LMPDGTSRF 130          
BLAST of BQ623115 vs. ExPASy Swiss-Prot
Match: ADH1_CHICK (Alcohol dehydrogenase 1 OS=Gallus gallus GN=ADH1 PE=1 SV=2)

HSP 1 Score: 131.724 bits (330), Expect = 2.246e-30
Identity = 69/133 (51.88%), Postives = 90/133 (67.67%), Query Frame = 3
Query:  153 MSTEGQVITCKAAVAWEPNKALVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRF 551
            MST G+VI CKAAV WE NK   +E+V+VAPP+A EVRIKI+ T +C +D +  +G      FP ILGHEAAG++ESVGE VT ++PGD VIP +  +C EC+ C S K NLC K   ++    +M D  +RF
Sbjct:    1 MSTVGKVIKCKAAVLWEANKPFSLEEVEVAPPKAHEVRIKIVATGICRSDDHVVTGALAMP-FPIILGHEAAGVIESVGEKVTSLKPGDAVIPLFVPQCGECRSCLSTKGNLCIKNDLSSSPTGLMADGTTRF 132          
BLAST of BQ623115 vs. ExPASy Swiss-Prot
Match: ADH1B_PANTR (Alcohol dehydrogenase 1B OS=Pan troglodytes GN=ADH1B PE=2 SV=3)

HSP 1 Score: 131.724 bits (330), Expect = 2.246e-30
Identity = 67/115 (58.26%), Postives = 82/115 (71.30%), Query Frame = 3
Query:  153 MSTEGQVITCKAAVAWEPNKALVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGK 497
            MST G+VI CKAAV WE  K   IEDV+VAPP+A EVRIK++   +C TD +  SG     L P ILGHEAAGIVESVGEGVT V+PGD VIP +  +C +C+ CK+ ++N C K
Sbjct:    1 MSTAGKVIKCKAAVLWEVKKPFSIEDVEVAPPKAYEVRIKMVAVGICRTDDHVVSGNLVTPL-PAILGHEAAGIVESVGEGVTTVKPGDKVIPLFTPQCGKCRVCKNPESNYCLK 114          
BLAST of BQ623115 vs. ExPASy Swiss-Prot
Match: ADH1_MOUSE (Alcohol dehydrogenase 1 OS=Mus musculus GN=Adh1 PE=2 SV=2)

HSP 1 Score: 131.339 bits (329), Expect = 2.934e-30
Identity = 64/115 (55.65%), Postives = 82/115 (71.30%), Query Frame = 3
Query:  153 MSTEGQVITCKAAVAWEPNKALVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGK 497
            MST G+VI CKAAV WE +K   IED++VAPP+A EVRIK++ T +C +D +  SG     L P +LGHE AGIVESVGEGVT V+PGD VIP +  +C EC+ CK  ++N C +
Sbjct:    1 MSTAGKVIKCKAAVLWELHKPFTIEDIEVAPPKAHEVRIKMVATGVCRSDDHVVSGTLVTPL-PAVLGHEGAGIVESVGEGVTCVKPGDKVIPLFSPQCGECRICKHPESNFCSR 114          
BLAST of BQ623115 vs. ExPASy Swiss-Prot
Match: ADH1B_HUMAN (Alcohol dehydrogenase 1B OS=Homo sapiens GN=ADH1B PE=1 SV=2)

HSP 1 Score: 131.339 bits (329), Expect = 2.934e-30
Identity = 67/115 (58.26%), Postives = 82/115 (71.30%), Query Frame = 3
Query:  153 MSTEGQVITCKAAVAWEPNKALVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGK 497
            MST G+VI CKAAV WE  K   IEDV+VAPP+A EVRIK++   +C TD +  SG     L P ILGHEAAGIVESVGEGVT V+PGD VIP +  +C +C+ CK+ ++N C K
Sbjct:    1 MSTAGKVIKCKAAVLWEVKKPFSIEDVEVAPPKAYEVRIKMVAVGICRTDDHVVSGNLVTPL-PVILGHEAAGIVESVGEGVTTVKPGDKVIPLFTPQCGKCRVCKNPESNYCLK 114          
BLAST of BQ623115 vs. ExPASy Swiss-Prot
Match: ADH1B_UROHA (Alcohol dehydrogenase 1B OS=Uromastyx hardwickii PE=1 SV=2)

HSP 1 Score: 130.954 bits (328), Expect = 3.832e-30
Identity = 68/132 (51.52%), Postives = 87/132 (65.91%), Query Frame = 3
Query:  156 STEGQVITCKAAVAWEPNKALVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRF 551
            ST G+VI CKAAV WEP K   I +++VAPP+A EVRIKIL + +C +D +  SG      FP ILGHEAAG+VESVGEGVT ++PGD VIP +  +C EC  C+  + N+C K       G ++ D  SRF
Sbjct:    1 STAGKVIKCKAAVVWEPKKPFSIVEIEVAPPKAHEVRIKILASGICRSDDHVLSGALKVN-FPIILGHEAAGVVESVGEGVTSMKPGDKVIPIFLPQCGECNSCRHPRGNVCKKSELGPFTG-LLYDGTSRF 130          
BLAST of BQ623115 vs. ExPASy Swiss-Prot
Match: ADH7_MOUSE (Alcohol dehydrogenase class 4 mu/sigma chain OS=Mus musculus GN=Adh7 PE=2 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 5.004e-30
Identity = 69/133 (51.88%), Postives = 88/133 (66.17%), Query Frame = 3
Query:  153 MSTEGQVITCKAAVAWEPNKALVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRF 551
            M T G+VI CKAAV W  N+   IE+++VAPP+A EVR+KIL T +C TD +   G      FP I+GHEA G+VESVGEGVT V+PGD VIP +  +CREC  C + + NLC +    TG GV+  D  +RF
Sbjct:    1 MGTAGKVIKCKAAVLWGVNQPFSIEEIEVAPPKAKEVRVKILATGICRTDDHIIKGS-MVSKFPVIVGHEAVGVVESVGEGVTTVRPGDKVIPLFLPQCRECNACLNPEGNLCIR-SDLTGCGVLA-DGTTRF 130          
BLAST of BQ623115 vs. ExPASy Swiss-Prot
Match: ADH7_HUMAN (Alcohol dehydrogenase class 4 mu/sigma chain OS=Homo sapiens GN=ADH7 PE=1 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 5.004e-30
Identity = 69/133 (51.88%), Postives = 87/133 (65.41%), Query Frame = 3
Query:  153 MSTEGQVITCKAAVAWEPNKALVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRF 551
            M T G+VI CKAAV WE  +   IE+++VAPP+  EVRIKIL T +C TD +   G      FP I+GHEA GIVES+GEGVT V+PGD VIP +  +CREC  C++   NLC +    TG GV+  D  +RF
Sbjct:    1 MGTAGKVIKCKAAVLWEQKQPFSIEEIEVAPPKTKEVRIKILATGICRTDDHVIKGT-MVSKFPVIVGHEATGIVESIGEGVTTVKPGDKVIPLFLPQCRECNACRNPDGNLCIR-SDITGRGVLA-DGTTRF 130          
BLAST of BQ623115 vs. ExPASy Swiss-Prot
Match: ADH1_GEOKN (Alcohol dehydrogenase 1 OS=Geomys knoxjonesi GN=ADH1 PE=2 SV=3)

HSP 1 Score: 130.568 bits (327), Expect = 5.004e-30
Identity = 69/133 (51.88%), Postives = 88/133 (66.17%), Query Frame = 3
Query:  153 MSTEGQVITCKAAVAWEPNKALVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRF 551
            MST G+VI C+AAV WE NK   IE+V+V PP+A EVRIKI+ T +C +D +  +G     L P ILGHEA GIVES+GEGVT V+PGD VIP +  +C +C+ CK  ++NLC         G +M D  SRF
Sbjct:    1 MSTAGKVIKCRAAVLWEKNKPFSIEEVEVVPPKAYEVRIKIVATGICRSDDHVVNGSIITPL-PAILGHEAGGIVESIGEGVTTVKPGDKVIPLFVPQCGKCRACKHPESNLCTHGDLGRAQGTLM-DGTSRF 131          
The following BLAST results are available for this feature:
BLAST of BQ623115 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 140
Match NameE-valueIdentityDescription
ADH1_GEOAT1.720e-3052.63Alcohol dehydrogenase 1 OS=Geomys attwateri GN=ADH... [more]
ADH1A_UROHA1.720e-3054.14Alcohol dehydrogenase 1A OS=Uromastyx hardwickii P... [more]
ADH1_CHICK2.246e-3051.88Alcohol dehydrogenase 1 OS=Gallus gallus GN=ADH1 P... [more]
ADH1B_PANTR2.246e-3058.26Alcohol dehydrogenase 1B OS=Pan troglodytes GN=ADH... [more]
ADH1_MOUSE2.934e-3055.65Alcohol dehydrogenase 1 OS=Mus musculus GN=Adh1 PE... [more]
ADH1B_HUMAN2.934e-3058.26Alcohol dehydrogenase 1B OS=Homo sapiens GN=ADH1B ... [more]
ADH1B_UROHA3.832e-3051.52Alcohol dehydrogenase 1B OS=Uromastyx hardwickii P... [more]
ADH7_MOUSE5.004e-3051.88Alcohol dehydrogenase class 4 mu/sigma chain OS=Mu... [more]
ADH7_HUMAN5.004e-3051.88Alcohol dehydrogenase class 4 mu/sigma chain OS=Ho... [more]
ADH1_GEOKN5.004e-3051.88Alcohol dehydrogenase 1 OS=Geomys knoxjonesi GN=AD... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00206 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00206 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623115 ID=BQ623115; Name=BQ623115; organism=Citrus sinensis; type=EST; length=551bp
AATAGAGGGAGCTACTTTAGAAAAATCTCACCTCTGTTGCCGGCAGCCAC
TCTCAGATCGTGTCACGTCCCTTTTGAATAATAATATCTATCTGCATCTA
CTCGTTTCTTTTTGTGGTCTGTTTTTCATTCTCATTTTCATTGTCAGCAG
CCATGTCTACTGAAGGTCAAGTCATCACATGCAAAGCGGCGGTGGCCTGG
GAACCCAACAAGGCATTGGTGATTGAGGATGTGCAGGTTGCTCCGCCTCA
GGCTGGCGAGGTCCGAATCAAGATTCTCTTCACTGCTCTCTGCCACACTG
ATGCTTACACCTGGAGCGGCAAGGATCCTGAAGGTCTCTTCCCCTGTATC
CTAGGTCATGAGGCTGCTGGGATTGTGGAGAGTGTTGGTGAAGGTGTGAC
CGAGGTTCAACCAGGTGATCATGTCATCCCTTGTTACCAGGCAGAATGCC
GAGAGTGCAAGTTTTGCAAGTCTGGAAAGACTAACCTCTGTGGTAAGGTT
AGGGGTGCCACTGGTGCTGGTGTCATGATGAATGACCGCAAGAGCCGTTT
C
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