BQ623115

Overview
NameBQ623115
Unique NameBQ623115
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length551
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig642 contig Csv1_Contig642:47..597. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623115 vs. ExPASy Swiss-Prot
Match: ADH8_RANPE (NADP-dependent alcohol dehydrogenase OS=Rana perezi GN=ADH8 PE=1 SV=3)

HSP 1 Score: 130.183 bits (326), Expect = 6.536e-30
Identity = 69/133 (51.88%), Postives = 86/133 (64.66%), Query Frame = 3
Query:  153 MSTEGQVITCKAAVAWEPNKALVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRF 551
            M T G+ ITCKAAVAWEP+K L +E + VAPP+A EVRIKIL + +C +D+       P   FP ILGHEA G+VES+G GVT V+PGD VIP +  +C  C+ CKS  +N C K       G +M D  SRF
Sbjct:    1 MCTAGKDITCKAAVAWEPHKPLSLETITVAPPKAHEVRIKILASGICGSDSSVLKEIIPSK-FPVILGHEAVGVVESIGAGVTCVKPGDKVIPLFVPQCGSCRACKSSNSNFCEKNDMGAKTG-LMADMTSRF 131          
BLAST of BQ623115 vs. ExPASy Swiss-Prot
Match: ADH7_RAT (Alcohol dehydrogenase class 4 mu/sigma chain OS=Rattus norvegicus GN=Adh7 PE=1 SV=2)

HSP 1 Score: 129.413 bits (324), Expect = 1.115e-29
Identity = 70/133 (52.63%), Postives = 88/133 (66.17%), Query Frame = 3
Query:  153 MSTEGQVITCKAAVAWEPNKALVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRF 551
            M T G+VI CKAAV W  N+   IED++VAPP+A EVR+KIL T +C TD +   G      FP I+GHEA GIVESVGE VT V+PGD VIP +  +CREC  C++ + NLC +    TG GV+  D  +RF
Sbjct:    1 MDTAGKVIKCKAAVLWGTNQPFSIEDIEVAPPKAKEVRVKILATGICGTDDHVIKGT-MVSKFPVIVGHEAVGIVESVGEEVTTVRPGDKVIPLFLPQCRECNPCRNPEGNLCIR-SDLTGRGVLA-DGTTRF 130          
BLAST of BQ623115 vs. ExPASy Swiss-Prot
Match: ADH1_COTJA (Alcohol dehydrogenase 1 OS=Coturnix coturnix japonica GN=ADH1 PE=1 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 1.115e-29
Identity = 69/132 (52.27%), Postives = 89/132 (67.42%), Query Frame = 3
Query:  156 STEGQVITCKAAVAWEPNKALVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRF 551
            ST G+VI CKAAV WE NK   +E+V+VAPP+A EVRIKI+ T +C +D +  +G      FP ILGHEAAG+VESVGE VT ++PGD VIP +  +C EC+ C S K NLC K   ++    +M D  +RF
Sbjct:    1 STAGKVIKCKAAVLWEANKPFSLEEVEVAPPKAHEVRIKIVATGICRSDDHVVTGALAMP-FPVILGHEAAGVVESVGEKVTLLKPGDAVIPLFVPQCGECRSCLSTKGNLCIKNDLSSSPTGLMADGTTRF 131          
BLAST of BQ623115 vs. ExPASy Swiss-Prot
Match: ADH6_PONAB (Alcohol dehydrogenase 6 OS=Pongo abelii GN=ADH6 PE=2 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 1.456e-29
Identity = 65/133 (48.87%), Postives = 86/133 (64.66%), Query Frame = 3
Query:  153 MSTEGQVITCKAAVAWEPNKALVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRF 551
            MST GQVI CKAA+ W+P     IE+V+VAPP+A EVRIK++ T LC T+      K  + L+P ILGHE AGIVES+GEGV+ V+PGD VI  +  +C EC  C + + N C  ++       +M+D  SRF
Sbjct:    1 MSTTGQVIRCKAAILWKPGAPFSIEEVEVAPPKAKEVRIKVVATGLCGTEMKVLGSKHLDLLYPTILGHEGAGIVESIGEGVSTVKPGDKVITLFLPQCGECTSCLNSEGNFC--IQFKQSETQLMSDGTSRF 131          
BLAST of BQ623115 vs. ExPASy Swiss-Prot
Match: ADH1G_HUMAN (Alcohol dehydrogenase 1C OS=Homo sapiens GN=ADH1C PE=1 SV=2)

HSP 1 Score: 129.028 bits (323), Expect = 1.456e-29
Identity = 65/115 (56.52%), Postives = 82/115 (71.30%), Query Frame = 3
Query:  153 MSTEGQVITCKAAVAWEPNKALVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGK 497
            MST G+VI CKAAV WE  K   IE+V+VAPP+A EVRIK++   +C +D +  SG     L P ILGHEAAGIVESVGEGVT V+PGD VIP +  +C +C+ CK+ ++N C K
Sbjct:    1 MSTAGKVIKCKAAVLWELKKPFSIEEVEVAPPKAHEVRIKMVAAGICRSDEHVVSGNLVTPL-PVILGHEAAGIVESVGEGVTTVKPGDKVIPLFTPQCGKCRICKNPESNYCLK 114          
BLAST of BQ623115 vs. ExPASy Swiss-Prot
Match: ADH1A_PONAB (Alcohol dehydrogenase 1A OS=Pongo abelii GN=ADH1A PE=2 SV=3)

HSP 1 Score: 129.028 bits (323), Expect = 1.456e-29
Identity = 71/133 (53.38%), Postives = 88/133 (66.17%), Query Frame = 3
Query:  153 MSTEGQVITCKAAVAWEPNKALVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRF 551
            MST G+VI CKAAV WE  K   IE+V+VAPP+A EVRIK++   +C TD +  SG     L P ILGHEAAGIVESVGEGVT V+PGD VIP    +C +C+ CK+ ++N C K   +   G  + D  SRF
Sbjct:    1 MSTAGKVIKCKAAVLWELKKPFSIEEVEVAPPKAQEVRIKMVAVGICGTDDHVVSGTMVTPL-PAILGHEAAGIVESVGEGVTTVKPGDKVIPLAVPQCGKCRICKNPESNYCLKNDVSNPQGT-LQDGTSRF 131          
BLAST of BQ623115 vs. ExPASy Swiss-Prot
Match: ADH1A_MACMU (Alcohol dehydrogenase 1A OS=Macaca mulatta GN=ADH1A PE=2 SV=2)

HSP 1 Score: 129.028 bits (323), Expect = 1.456e-29
Identity = 72/133 (54.14%), Postives = 87/133 (65.41%), Query Frame = 3
Query:  153 MSTEGQVITCKAAVAWEPNKALVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRF 551
            MST G+VI CKAAV WE  K   IEDV+VAPP+A EVRIK++   +C TD +  SG     L P ILGHEAAGIVESVGEGVT V+PGD VIP    +C +C+ CK+ + N C K   +   G  + D  SRF
Sbjct:    1 MSTAGKVIKCKAAVLWEVMKPFSIEDVEVAPPKAYEVRIKMVTVGICGTDDHVVSGTMVTPL-PVILGHEAAGIVESVGEGVTTVEPGDKVIPLALPQCGKCRICKTPERNYCLKNDVSNPRGT-LQDGTSRF 131          
BLAST of BQ623115 vs. ExPASy Swiss-Prot
Match: ADHL1_ARATH (Alcohol dehydrogenase-like 1 OS=Arabidopsis thaliana GN=At1g22430 PE=2 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 1.902e-29
Identity = 65/115 (56.52%), Postives = 77/115 (66.96%), Query Frame = 3
Query:  156 STEGQVITCKAAVAWEPNKALVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWS-GKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGK 497
            S EG+ ITCKAA+  +  +ALVIED+ V PPQA EVRIKIL T+LCHTD   W     P   FP ILGHEA G+VES+GE V   + GD V+P +   C ECK CKS KTN C +
Sbjct:    8 SNEGKPITCKAAICRKAGEALVIEDIHVDPPQAYEVRIKILCTSLCHTDLTFWKLSFGPISRFPRILGHEAVGVVESIGENVDGFKQGDVVLPVFHPYCEECKDCKSSKTNWCDR 122          
BLAST of BQ623115 vs. ExPASy Swiss-Prot
Match: ADH1E_HORSE (Alcohol dehydrogenase E chain OS=Equus caballus PE=1 SV=2)

HSP 1 Score: 128.642 bits (322), Expect = 1.902e-29
Identity = 70/133 (52.63%), Postives = 87/133 (65.41%), Query Frame = 3
Query:  153 MSTEGQVITCKAAVAWEPNKALVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRF 551
            MST G+VI CKAAV WE  K   IE+V+VAPP+A EVRIK++ T +C +D +  SG     L P I GHEAAGIVES+GEGVT V+PGD VIP +  +C +C+ CK  + N C K   +   G  M D  SRF
Sbjct:    1 MSTAGKVIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLVTPL-PVIAGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGT-MQDGTSRF 131          
BLAST of BQ623115 vs. ExPASy Swiss-Prot
Match: ADH1A_HUMAN (Alcohol dehydrogenase 1A OS=Homo sapiens GN=ADH1A PE=1 SV=2)

HSP 1 Score: 128.257 bits (321), Expect = 2.484e-29
Identity = 71/133 (53.38%), Postives = 88/133 (66.17%), Query Frame = 3
Query:  153 MSTEGQVITCKAAVAWEPNKALVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRF 551
            MST G+VI CKAAV WE  K   IE+V+VAPP+A EVRIK++   +C TD +  SG     L P ILGHEAAGIVESVGEGVT V+PGD VIP    +C +C+ CK+ ++N C K   +   G  + D  SRF
Sbjct:    1 MSTAGKVIKCKAAVLWELKKPFSIEEVEVAPPKAHEVRIKMVAVGICGTDDHVVSGTMVTPL-PVILGHEAAGIVESVGEGVTTVKPGDKVIPLAIPQCGKCRICKNPESNYCLKNDVSNPQGT-LQDGTSRF 131          
The following BLAST results are available for this feature:
BLAST of BQ623115 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 140
Match NameE-valueIdentityDescription
ADH8_RANPE6.536e-3051.88NADP-dependent alcohol dehydrogenase OS=Rana perez... [more]
ADH7_RAT1.115e-2952.63Alcohol dehydrogenase class 4 mu/sigma chain OS=Ra... [more]
ADH1_COTJA1.115e-2952.27Alcohol dehydrogenase 1 OS=Coturnix coturnix japon... [more]
ADH6_PONAB1.456e-2948.87Alcohol dehydrogenase 6 OS=Pongo abelii GN=ADH6 PE... [more]
ADH1G_HUMAN1.456e-2956.52Alcohol dehydrogenase 1C OS=Homo sapiens GN=ADH1C ... [more]
ADH1A_PONAB1.456e-2953.38Alcohol dehydrogenase 1A OS=Pongo abelii GN=ADH1A ... [more]
ADH1A_MACMU1.456e-2954.14Alcohol dehydrogenase 1A OS=Macaca mulatta GN=ADH1... [more]
ADHL1_ARATH1.902e-2956.52Alcohol dehydrogenase-like 1 OS=Arabidopsis thalia... [more]
ADH1E_HORSE1.902e-2952.63Alcohol dehydrogenase E chain OS=Equus caballus PE... [more]
ADH1A_HUMAN2.484e-2953.38Alcohol dehydrogenase 1A OS=Homo sapiens GN=ADH1A ... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00206 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00206 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623115 ID=BQ623115; Name=BQ623115; organism=Citrus sinensis; type=EST; length=551bp
AATAGAGGGAGCTACTTTAGAAAAATCTCACCTCTGTTGCCGGCAGCCAC
TCTCAGATCGTGTCACGTCCCTTTTGAATAATAATATCTATCTGCATCTA
CTCGTTTCTTTTTGTGGTCTGTTTTTCATTCTCATTTTCATTGTCAGCAG
CCATGTCTACTGAAGGTCAAGTCATCACATGCAAAGCGGCGGTGGCCTGG
GAACCCAACAAGGCATTGGTGATTGAGGATGTGCAGGTTGCTCCGCCTCA
GGCTGGCGAGGTCCGAATCAAGATTCTCTTCACTGCTCTCTGCCACACTG
ATGCTTACACCTGGAGCGGCAAGGATCCTGAAGGTCTCTTCCCCTGTATC
CTAGGTCATGAGGCTGCTGGGATTGTGGAGAGTGTTGGTGAAGGTGTGAC
CGAGGTTCAACCAGGTGATCATGTCATCCCTTGTTACCAGGCAGAATGCC
GAGAGTGCAAGTTTTGCAAGTCTGGAAAGACTAACCTCTGTGGTAAGGTT
AGGGGTGCCACTGGTGCTGGTGTCATGATGAATGACCGCAAGAGCCGTTT
C
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