BQ623121

Overview
NameBQ623121
Unique NameBQ623121
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length542
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1283 contig Csv1_Contig1283:141..679. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623121 vs. ExPASy Swiss-Prot
Match: HSP15_SOYBN (17.6 kDa class I heat shock protein OS=Glycine max GN=HSP17.6-L PE=3 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 5.115e-40
Identity = 85/133 (63.91%), Postives = 96/133 (72.18%), Query Frame = 3
Query:   60 MSLIPSIFGN--RSVFDPFSSDVW-------APLGSSSNEVSTFASAQVDWKETREAHVFKADLPGLXXXXXXXXXXDGRVLQISGERSVEKEDKNDKWHRVERGRGKFVRRFRLPENAKIDQVKASMENGVL 431
            MSLIPSIFG    +VFDPFS D+W        P  S S E S F + +VDWKET+EAHV KAD+PGL          D RVLQISGER+VEKEDKND WHRV+R  GKF+RRFRLPENAK++QVKA MENGVL
Sbjct:    1 MSLIPSIFGGPRSNVFDPFSLDMWDPFKDFHVPTSSVSAENSAFVNTRVDWKETQEAHVLKADIPGLKKEEVKVQIEDDRVLQISGERNVEKEDKNDTWHRVDRSSGKFMRRFRLPENAKVEQVKACMENGVL 133          
BLAST of BQ623121 vs. ExPASy Swiss-Prot
Match: HS17C_ARATH (17.6 kDa class I heat shock protein 3 OS=Arabidopsis thaliana GN=HSP17.6C PE=2 SV=2)

HSP 1 Score: 160.614 bits (405), Expect = 4.330e-39
Identity = 83/136 (61.03%), Postives = 98/136 (72.06%), Query Frame = 3
Query:   60 MSLIPSIFGNR--SVFDPFSSDVWAPL----------GSSSNEVSTFASAQVDWKETREAHVFKADLPGLXXXXXXXXXXDGRVLQISGERSVEKEDKNDKWHRVERGRGKFVRRFRLPENAKIDQVKASMENGVL 431
            MSLIPSIFG R  +VFDPFS DV+ P            + + +V+ F +A+VDW+ET EAHVFKADLPGL          DG +LQISGERS E E+KNDKWHRVER  GKF RRFRLPENAK++++KASMENGVL
Sbjct:    1 MSLIPSIFGGRRTNVFDPFSLDVFDPFEGFLTPSGLANAPAMDVAAFTNAKVDWRETPEAHVFKADLPGLRKEEVKVEVEDGNILQISGERSNENEEKNDKWHRVERSSGKFTRRFRLPENAKMEEIKASMENGVL 136          
BLAST of BQ623121 vs. ExPASy Swiss-Prot
Match: HSP17_ARATH (17.4 kDa class I heat shock protein OS=Arabidopsis thaliana GN=HSP17.4A PE=1 SV=2)

HSP 1 Score: 160.229 bits (404), Expect = 5.655e-39
Identity = 80/135 (59.26%), Postives = 97/135 (71.85%), Query Frame = 3
Query:   60 MSLIPSIFGNR--SVFDPFSSDVWAPL---------GSSSNEVSTFASAQVDWKETREAHVFKADLPGLXXXXXXXXXXDGRVLQISGERSVEKEDKNDKWHRVERGRGKFVRRFRLPENAKIDQVKASMENGVL 431
            MSL+PS FG R  +VFDPFS DVW P           + + +V+ F +A+VDW+ET EAHVFKAD+PGL          DG +LQISGERS E E+K+D WHRVER  GKF+RRFRLPENAK+++VKASMENGVL
Sbjct:    1 MSLVPSFFGGRRTNVFDPFSLDVWDPFEGFLTPGLTNAPAKDVAAFTNAKVDWRETPEAHVFKADVPGLKKEEVKVEVEDGNILQISGERSSENEEKSDTWHRVERSSGKFMRRFRLPENAKVEEVKASMENGVL 135          
BLAST of BQ623121 vs. ExPASy Swiss-Prot
Match: HSP11_DAUCA (17.8 kDa class I heat shock protein OS=Daucus carota PE=3 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 1.645e-38
Identity = 82/136 (60.29%), Postives = 98/136 (72.06%), Query Frame = 3
Query:   60 MSLIPSIFGNR--SVFDPFSSDVWAP-----LGSSS-----NEVSTFASAQVDWKETREAHVFKADLPGLXXXXXXXXXXDGRVLQISGERSVEKEDKNDKWHRVERGRGKFVRRFRLPENAKIDQVKASMENGVL 431
            MS+IPS FG R  +VFDPFS DVW P     L +SS      E + F +  +DWKET +AHVFKADLPGL          +G+VLQISGER+ EKE+KNDKWHRVER  GKF+RRFRLPENAK+D+VKA+M NGV+
Sbjct:    1 MSIIPSFFGGRRSNVFDPFSLDVWDPFKDFPLVTSSASEFGKETAAFVNTHIDWKETPQAHVFKADLPGLKKEEVKVELEEGKVLQISGERNKEKEEKNDKWHRVERSSGKFLRRFRLPENAKVDEVKAAMANGVV 136          
BLAST of BQ623121 vs. ExPASy Swiss-Prot
Match: HS178_ARATH (17.8 kDa class I heat shock protein OS=Arabidopsis thaliana GN=HSP17.8 PE=2 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 3.666e-38
Identity = 82/134 (61.19%), Postives = 92/134 (68.66%), Query Frame = 3
Query:   60 MSLIPSIFGNR----SVFDPFSSDVWAPL------GSSSNEVSTFASAQVDWKETREAHVFKADLPGLXXXXXXXXXXDGRVLQISGERSVEKEDKNDKWHRVERGRGKFVRRFRLPENAKIDQVKASMENGVL 431
            MSLIPS FGN     S+FDPFS DVW P        S S E S   +A+VDWKET EAHVFKADLPG+          D  VL+ISGER VEKE+K D WHRVER  G+F R+F+LPEN K+DQVKASMENGVL
Sbjct:    1 MSLIPSFFGNNRRSNSIFDPFSLDVWDPFKELQFPSSLSGETSAITNARVDWKETAEAHVFKADLPGMKKEEVKVEIEDDSVLKISGERHVEKEEKQDTWHRVERSSGQFSRKFKLPENVKMDQVKASMENGVL 134          
BLAST of BQ623121 vs. ExPASy Swiss-Prot
Match: HS17B_ARATH (17.6 kDa class I heat shock protein 2 OS=Arabidopsis thaliana GN=HSP17.6B PE=2 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 8.166e-38
Identity = 81/132 (61.36%), Postives = 92/132 (69.70%), Query Frame = 3
Query:   60 MSLIPSIFGNR---SVFDPFSSDVWAPL-----GSSSNEVSTFASAQVDWKETREAHVFKADLPGLXXXXXXXXXXDGRVLQISGERSVEKEDKNDKWHRVERGRGKFVRRFRLPENAKIDQVKASMENGVL 431
            MS+IPS F N    ++FDPFS DVW P       S S E S   +A+VDW+ET EAHVFKADLPGL          +  VL+ISGER VEKEDKND WHRVER  G+F RRFRLPEN K+DQVKA+MENGVL
Sbjct:    1 MSMIPSFFNNNRRSNIFDPFSLDVWDPFKELTSSSLSRENSAIVNARVDWRETPEAHVFKADLPGLKKEEVKVEIEEDSVLKISGERHVEKEDKNDTWHRVERSSGQFTRRFRLPENVKMDQVKAAMENGVL 132          
BLAST of BQ623121 vs. ExPASy Swiss-Prot
Match: HS17A_ARATH (17.6 kDa class I heat shock protein 1 OS=Arabidopsis thaliana GN=HSP17.6A PE=1 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 1.819e-37
Identity = 82/132 (62.12%), Postives = 92/132 (69.70%), Query Frame = 3
Query:   60 MSLIPSIFGNR-----SVFDPFSSDVWAP---LGSSSNEVSTFASAQVDWKETREAHVFKADLPGLXXXXXXXXXXDGRVLQISGERSVEKEDKNDKWHRVERGRGKFVRRFRLPENAKIDQVKASMENGVL 431
            MSLIPS FGN      ++FDPFS DVW P   L   S+  S  A+A+VDWKET EAHVFKADLPG+          D  VL+ISGER VEKE+K D WHRVER  G F R+FRLPEN K+DQVKASMENGVL
Sbjct:    1 MSLIPSFFGNNRRINNNIFDPFSLDVWDPFKELQFPSSSSSAIANARVDWKETAEAHVFKADLPGMKKEEVKVEIEDDSVLKISGERHVEKEEKQDTWHRVERSSGGFSRKFRLPENVKMDQVKASMENGVL 132          
BLAST of BQ623121 vs. ExPASy Swiss-Prot
Match: HS16B_ORYSJ (16.9 kDa class I heat shock protein 2 OS=Oryza sativa subsp. japonica GN=HSP16.9B PE=2 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 3.103e-37
Identity = 76/128 (59.38%), Postives = 91/128 (71.09%), Query Frame = 3
Query:   75 SIFGNRSVFDPFSSDVWAPLGS---------SSNEVSTFASAQVDWKETREAHVFKADLPGLXXXXXXXXXXDGRVLQISGERSVEKEDKNDKWHRVERGRGKFVRRFRLPENAKIDQVKASMENGVL 431
            S+    +VFDPFS D+W P  S         S N+ + FA+A++DWKET E+HVFKADLPG+          +G VL ISG+RS EKEDKNDKWHRVER  G+F+RRFRLPENAK+DQVKA MENGVL
Sbjct:    2 SLVRRSNVFDPFSLDLWDPFDSVFRSVVPATSDNDTAAFANARIDWKETPESHVFKADLPGVKKEEVKVEVEEGNVLVISGQRSKEKEDKNDKWHRVERSSGQFMRRFRLPENAKVDQVKAGMENGVL 129          
BLAST of BQ623121 vs. ExPASy Swiss-Prot
Match: HSP12_DAUCA (18.0 kDa class I heat shock protein OS=Daucus carota PE=3 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 6.913e-37
Identity = 79/138 (57.25%), Postives = 97/138 (70.29%), Query Frame = 3
Query:   60 MSLIPSIFGNR--SVFDPFSSDVWAPL---------GSSSN---EVSTFASAQVDWKETREAHVFKADLPGLXXXXXXXXXXDGRVLQISGERSVEKEDKNDKWHRVERGRGKFVRRFRLPENAKIDQVKASMENGVL 431
            MS+IPS FG+R  +V +PFS D+W P          G+SS    E + FA+  +DWKET +AHVFKADLPGL          +G+VLQISGER+ EKE+KN+KWHRVE   GKF+RRFRLPENA +D+VKA MENGVL
Sbjct:    1 MSIIPSFFGSRRSNVLNPFSLDIWDPFQDYPLITSSGTSSEFGKETAAFANTHIDWKETPQAHVFKADLPGLKKEEVKVEVEEGKVLQISGERNKEKEEKNNKWHRVEFSSGKFLRRFRLPENANVDEVKAGMENGVL 138          
BLAST of BQ623121 vs. ExPASy Swiss-Prot
Match: HS16A_ORYSJ (16.9 kDa class I heat shock protein 1 OS=Oryza sativa subsp. japonica GN=HSP16.9A PE=1 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 6.913e-37
Identity = 75/128 (58.59%), Postives = 91/128 (71.09%), Query Frame = 3
Query:   75 SIFGNRSVFDPFSSDVWAPLGS---------SSNEVSTFASAQVDWKETREAHVFKADLPGLXXXXXXXXXXDGRVLQISGERSVEKEDKNDKWHRVERGRGKFVRRFRLPENAKIDQVKASMENGVL 431
            S+    +VFDPFS D+W P  S         S N+ + FA+A++DWKET E+HVFKADLPG+          +G VL ISG+RS EKEDKNDKWHRVER  G+F+RRFRLPENAK+DQVKA +ENGVL
Sbjct:    2 SLVRRSNVFDPFSLDLWDPFDSVFRSVVPATSDNDTAAFANARIDWKETPESHVFKADLPGVKKEEVKVEVEEGNVLVISGQRSKEKEDKNDKWHRVERSSGQFMRRFRLPENAKVDQVKAGLENGVL 129          
The following BLAST results are available for this feature:
BLAST of BQ623121 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 50
Match NameE-valueIdentityDescription
HSP15_SOYBN5.115e-4063.9117.6 kDa class I heat shock protein OS=Glycine max... [more]
HS17C_ARATH4.330e-3961.0317.6 kDa class I heat shock protein 3 OS=Arabidops... [more]
HSP17_ARATH5.655e-3959.2617.4 kDa class I heat shock protein OS=Arabidopsis... [more]
HSP11_DAUCA1.645e-3860.2917.8 kDa class I heat shock protein OS=Daucus caro... [more]
HS178_ARATH3.666e-3861.1917.8 kDa class I heat shock protein OS=Arabidopsis... [more]
HS17B_ARATH8.166e-3861.3617.6 kDa class I heat shock protein 2 OS=Arabidops... [more]
HS17A_ARATH1.819e-3762.1217.6 kDa class I heat shock protein 1 OS=Arabidops... [more]
HS16B_ORYSJ3.103e-3759.3816.9 kDa class I heat shock protein 2 OS=Oryza sat... [more]
HSP12_DAUCA6.913e-3757.2518.0 kDa class I heat shock protein OS=Daucus caro... [more]
HS16A_ORYSJ6.913e-3758.5916.9 kDa class I heat shock protein 1 OS=Oryza sat... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00212 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00212 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623121 ID=BQ623121; Name=BQ623121; organism=Citrus sinensis; type=EST; length=542bp
CAATTGATAAATAAGCAAACGCTTTCGAAGAAAGTGCTCGTCGCTTTGAT
TAAGCAAAAATGTCTTTGATTCCATCTATATTCGGAAACAGGAGCGTGTT
CGACCCATTTTCCTCGGACGTCTGGGCGCCCCTTGGCTCCTCCAGCAACG
AGGTGTCAACATTCGCCAGTGCTCAAGTCGATTGGAAAGAAACCCGGGAA
GCTCATGTTTTCAAGGCGGATCTTCCGGGGCTCAAGAAAGAGGAAGTGAA
GGTTGAAGTTGAGGACGGGAGAGTCCTTCAGATCAGCGGTGAGAGGAGCG
TCGAGAAGGAAGACAAGAACGACAAATGGCACCGTGTTGAGAGGGGCCGC
GGCAAGTTCGTGAGGAGGTTCCGGTTGCCTGAGAATGCCAAGATCGATCA
AGTTAAGGCATCAATGGAGAATGGTGTCCTCACCGTCACTGTTCCCAAAG
TGGAGGAGAAGAAGCCTGAGGTCAAAATCCATTTCAGATCACCTGGTTGA
AACTCTCCGTTAATTGCAGCCTTTTTAATTTGGTTCTTGTTT
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