BQ623127

Overview
NameBQ623127
Unique NameBQ623127
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length610
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9730 contig Csv1_Contig9730:394..1001. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of BQ623127 vs. ExPASy Swiss-Prot
Match: PIP23_ARATH (Aquaporin PIP2-3 OS=Arabidopsis thaliana GN=PIP2-3 PE=1 SV=1)

HSP 1 Score: 276.559 bits (706), Expect = 9.982e-78
Identity = 133/165 (80.61%), Postives = 144/165 (87.27%), Query Frame = 1 
Query:   61 KVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYILRAAAIKALGSFRN 555
            KVSLIRAV YMVAQCLGAICGVG VKAF    Y + GGGAN +A GYN G+ L AEIIGTFVLVYTVFSATDPKR+ARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVI+N  K WDDHWIFWVGPF+GA  AA YHQ++LRA+  K+LGSFR+
Sbjct:  117 KVSLIRAVLYMVAQCLGAICGVGFVKAFQSSHYVNYGGGANFLADGYNTGTGLAAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIFNKSKPWDDHWIFWVGPFIGATIAAFYHQFVLRASGSKSLGSFRS 281

HSP 2 Score: 35.039 bits (79), Expect = 9.982e-78
Identity = 15/20 (75.00%), Postives = 17/20 (85.00%), Query Frame = 3 
Query:    3 GISGGHINPAVTFGPVLGKE 62
            GISGGHINPAVTFG  L ++
Sbjct:   98 GISGGHINPAVTFGLFLARK 117
[Close]
BLAST of BQ623127 vs. ExPASy Swiss-Prot
Match: PIP26_ARATH (Probable aquaporin PIP2-6 OS=Arabidopsis thaliana GN=PIP2-6 PE=1 SV=1)

HSP 1 Score: 276.174 bits (705), Expect = 2.215e-77
Identity = 133/170 (78.24%), Postives = 146/170 (85.88%), Query Frame = 1 
Query:   61 KVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYILRAAAIKALGSFRNNPFKL 570
            KVSL+RAV+YMVAQCLGA CGVGLVK F    YN  GGGAN ++ GYN G  +GAEIIGTFVLVYTVFSATDPKR+ARDSH+PVLAPLPIGF+VFMVHLATIPITGTGINPARSFGAAVIYNN KAWDD WIFWVGPFVGA  AA YHQ++LRA A+KA GS R+   +L
Sbjct:  118 KVSLVRAVSYMVAQCLGATCGVGLVKVFQSTYYNRYGGGANMLSDGYNVGVGVGAEIIGTFVLVYTVFSATDPKRNARDSHIPVLAPLPIGFSVFMVHLATIPITGTGINPARSFGAAVIYNNQKAWDDQWIFWVGPFVGAAIAAFYHQFVLRAGAMKAYGSVRSQLHEL 287

HSP 2 Score: 34.2686 bits (77), Expect = 2.215e-77
Identity = 15/20 (75.00%), Postives = 16/20 (80.00%), Query Frame = 3 
Query:    3 GISGGHINPAVTFGPVLGKE 62
            GISGGHINPAVTFG  L  +
Sbjct:   99 GISGGHINPAVTFGLFLASK 118
[Close]
BLAST of BQ623127 vs. ExPASy Swiss-Prot
Match: PIP25_ARATH (Probable aquaporin PIP2-5 OS=Arabidopsis thaliana GN=PIP2-5 PE=1 SV=1)

HSP 1 Score: 273.092 bits (697), Expect = 6.409e-77
Identity = 131/167 (78.44%), Postives = 144/167 (86.23%), Query Frame = 1 
Query:   61 KVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYILRAAAIKALGSFRNNP 561
            KV+L+RAV YMVAQCLGAICGV LVKAF    +   GGGAN ++ GY+ G+ + AEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVF+VHLATIPITGTGINPARS GAA+IYN DKAWD HWIFWVGPF GA  AA YHQ++LRA AIKALGSFR+ P
Sbjct:  118 KVTLVRAVMYMVAQCLGAICGVALVKAFQSAYFTRYGGGANGLSDGYSIGTGVAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFIVHLATIPITGTGINPARSLGAAIIYNKDKAWDHHWIFWVGPFAGAAIAAFYHQFVLRAGAIKALGSFRSQP 284

HSP 2 Score: 35.8094 bits (81), Expect = 6.409e-77
Identity = 15/20 (75.00%), Postives = 18/20 (90.00%), Query Frame = 3 
Query:    3 GISGGHINPAVTFGPVLGKE 62
            GISGGHINPAVTFG +L ++
Sbjct:   99 GISGGHINPAVTFGLLLARK 118
[Close]
BLAST of BQ623127 vs. ExPASy Swiss-Prot
Match: PIP22_ORYSJ (Probable aquaporin PIP2-2 OS=Oryza sativa subsp. japonica GN=PIP2-2 PE=2 SV=1)

HSP 1 Score: 273.478 bits (698), Expect = 8.358e-77
Identity = 132/166 (79.52%), Postives = 145/166 (87.35%), Query Frame = 1 
Query:   61 KVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYILRAAAIKALGSFRNN 558
            KVSLIRAV Y++AQCLGAICGVGLVK F    Y   GGGAN ++ GY+KG+ LGAEIIGTFVLVYTVFSATDPKR+ARDSH+PVLAPLPIGFAVFMVHLATIPITGTGINPARS G AVIYN DKAWDD WIFWVGP +GA  AAAYHQY+LRA+A K LGS+R+N
Sbjct:  123 KVSLIRAVLYIIAQCLGAICGVGLVKGFQSSYYARYGGGANELSDGYSKGTGLGAEIIGTFVLVYTVFSATDPKRNARDSHIPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGTAVIYNKDKAWDDQWIFWVGPLIGAAIAAAYHQYVLRASAAK-LGSYRSN 287

HSP 2 Score: 35.039 bits (79), Expect = 8.358e-77
Identity = 15/20 (75.00%), Postives = 17/20 (85.00%), Query Frame = 3 
Query:    3 GISGGHINPAVTFGPVLGKE 62
            GISGGHINPAVTFG  L ++
Sbjct:  104 GISGGHINPAVTFGLFLARK 123
[Close]
BLAST of BQ623127 vs. ExPASy Swiss-Prot
Match: PIP25_MAIZE (Aquaporin PIP2-5 OS=Zea mays GN=PIP2-5 PE=1 SV=1)

HSP 1 Score: 273.092 bits (697), Expect = 1.422e-76
Identity = 133/162 (82.10%), Postives = 145/162 (89.51%), Query Frame = 1 
Query:   61 KVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYILRAAAIKALGS 546
            KVSL+RA+ Y+VAQCLGAICGVGLVK F    Y   GGGAN +++GY+KG+ L AEIIGTFVLVYTVFSATDPKR+ARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARS GAAVIYNNDKAWDDHWIFWVGPF+GA  AAAYHQY+LRA+A K LGS
Sbjct:  119 KVSLVRALLYIVAQCLGAICGVGLVKGFQSAFYVRYGGGANELSAGYSKGTGLAAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNNDKAWDDHWIFWVGPFIGAAIAAAYHQYVLRASAAK-LGS 279

HSP 2 Score: 34.6538 bits (78), Expect = 1.422e-76
Identity = 14/20 (70.00%), Postives = 17/20 (85.00%), Query Frame = 3 
Query:    3 GISGGHINPAVTFGPVLGKE 62
            G+SGGHINPAVTFG  L ++
Sbjct:  100 GVSGGHINPAVTFGLFLARK 119
[Close]
BLAST of BQ623127 vs. ExPASy Swiss-Prot
Match: PIP21_ARATH (Aquaporin PIP2-1 OS=Arabidopsis thaliana GN=PIP2-1 PE=1 SV=1)

HSP 1 Score: 272.322 bits (695), Expect = 1.855e-76
Identity = 130/165 (78.79%), Postives = 143/165 (86.67%), Query Frame = 1 
Query:   61 KVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYILRAAAIKALGSFRN 555
            KVSL RA+ Y++AQCLGAICGVG VKAF    Y   GGGAN++A GY+ G+ L AEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYN  K WDDHWIFWVGPF+GA  AA YHQ++LRA+  K+LGSFR+
Sbjct:  119 KVSLPRALLYIIAQCLGAICGVGFVKAFQSSYYTRYGGGANSLADGYSTGTGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKSKPWDDHWIFWVGPFIGAAIAAFYHQFVLRASGSKSLGSFRS 283

HSP 2 Score: 35.039 bits (79), Expect = 1.855e-76
Identity = 15/20 (75.00%), Postives = 17/20 (85.00%), Query Frame = 3 
Query:    3 GISGGHINPAVTFGPVLGKE 62
            GISGGHINPAVTFG  L ++
Sbjct:  100 GISGGHINPAVTFGLFLARK 119
[Close]
BLAST of BQ623127 vs. ExPASy Swiss-Prot
Match: PIP24_MAIZE (Aquaporin PIP2-4 OS=Zea mays GN=PIP2-4 PE=1 SV=1)

HSP 1 Score: 271.937 bits (694), Expect = 2.419e-76
Identity = 132/166 (79.52%), Postives = 145/166 (87.35%), Query Frame = 1 
Query:   61 KVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYILRAAAIKALGSFRNN 558
            KVSL+RA+ Y++AQCLGAICGVGLVK F    Y   GGGAN ++ GY+KG+ L AEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARS GAAVIYN DKAWDD WIFWVGP +GA  AAAYHQY+LRA+A K LGS+R+N
Sbjct:  123 KVSLVRALLYIIAQCLGAICGVGLVKGFQSAYYVRYGGGANELSDGYSKGTGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWIFWVGPLIGAAIAAAYHQYVLRASATK-LGSYRSN 287

HSP 2 Score: 35.039 bits (79), Expect = 2.419e-76
Identity = 15/20 (75.00%), Postives = 17/20 (85.00%), Query Frame = 3 
Query:    3 GISGGHINPAVTFGPVLGKE 62
            GISGGHINPAVTFG  L ++
Sbjct:  104 GISGGHINPAVTFGLFLARK 123
[Close]
BLAST of BQ623127 vs. ExPASy Swiss-Prot
Match: PIP23_MAIZE (Aquaporin PIP2-3 OS=Zea mays GN=PIP2-3 PE=2 SV=1)

HSP 1 Score: 271.937 bits (694), Expect = 2.419e-76
Identity = 132/166 (79.52%), Postives = 145/166 (87.35%), Query Frame = 1 
Query:   61 KVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYILRAAAIKALGSFRNN 558
            KVSL+RA+ Y++AQCLGAICGVGLVK F    Y   GGGAN ++ GY+KG+ L AEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARS GAAVIYN DKAWDD WIFWVGP +GA  AAAYHQY+LRA+A K LGS+R+N
Sbjct:  124 KVSLVRALLYIIAQCLGAICGVGLVKGFQSAYYVRYGGGANELSDGYSKGTGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWIFWVGPLIGAAIAAAYHQYVLRASATK-LGSYRSN 288

HSP 2 Score: 35.039 bits (79), Expect = 2.419e-76
Identity = 15/20 (75.00%), Postives = 17/20 (85.00%), Query Frame = 3 
Query:    3 GISGGHINPAVTFGPVLGKE 62
            GISGGHINPAVTFG  L ++
Sbjct:  105 GISGGHINPAVTFGLFLARK 124
[Close]
BLAST of BQ623127 vs. ExPASy Swiss-Prot
Match: PIP25_ORYSJ (Aquaporin PIP2-5 OS=Oryza sativa subsp. japonica GN=PIP2-5 PE=2 SV=1)

HSP 1 Score: 265.003 bits (676), Expect = 2.885e-74
Identity = 126/166 (75.90%), Postives = 143/166 (86.14%), Query Frame = 1 
Query:   61 KVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYILRAAAIKALGSFRNN 558
            KVSL+RA+ Y+VAQCLGA+CGV LVK F    Y+  GGGAN +A+GY+KG+ L AEIIGTFVLVYTVFSATDPKR+ARDSHVPVLAPLPIGFAVFMVHLATIP+TGTGINPARS GAAV+YNN KAW D WIFWVGPF+GA  AA YHQ +LRA+A +  GSFR+N
Sbjct:  118 KVSLVRAILYIVAQCLGAVCGVALVKGFQSSFYDRYGGGANELAAGYSKGTGLAAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPVTGTGINPARSLGAAVVYNNSKAWSDQWIFWVGPFIGAAIAALYHQIVLRASA-RGYGSFRSN 282

HSP 2 Score: 35.039 bits (79), Expect = 2.885e-74
Identity = 15/20 (75.00%), Postives = 17/20 (85.00%), Query Frame = 3 
Query:    3 GISGGHINPAVTFGPVLGKE 62
            GISGGHINPAVTFG  L ++
Sbjct:   99 GISGGHINPAVTFGLFLARK 118
[Close]
BLAST of BQ623127 vs. ExPASy Swiss-Prot
Match: PIP13_ARATH (Aquaporin PIP1-3 OS=Arabidopsis thaliana GN=PIP1-3 PE=1 SV=1)

HSP 1 Score: 261.922 bits (668), Expect = 2.414e-73
Identity = 124/159 (77.99%), Postives = 136/159 (85.53%), Query Frame = 1 
Query:   61 KVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYILRAAAIKA 537
            K+SL RAV Y+V QCLGAICG G+VK F  + Y +LGGGANTVA GY KGS LGAEIIGTFVLVYTVFSATD KRSARDSHVP+LAPLPIGFAVF+VHLATIPITGTGINPARS GAA+IYN D AWDDHWIFWVGPF+GA  AA YHQ ++RA   K+
Sbjct:  126 KLSLTRAVFYIVMQCLGAICGAGVVKGFQPNPYQTLGGGANTVAHGYTKGSGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHAWDDHWIFWVGPFIGAALAALYHQLVIRAIPFKS 284

HSP 2 Score: 35.039 bits (79), Expect = 2.414e-73
Identity = 15/20 (75.00%), Postives = 17/20 (85.00%), Query Frame = 3 
Query:    3 GISGGHINPAVTFGPVLGKE 62
            GISGGHINPAVTFG  L ++
Sbjct:  107 GISGGHINPAVTFGLFLARK 126
The following BLAST results are available for this feature:
BLAST of BQ623127 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 159
Match NameE-valueIdentityDescription
PIP23_ARATH9.982e-7880.61Aquaporin PIP2-3 OS=Arabidopsis thaliana GN=PIP2-3... [more]
PIP26_ARATH2.215e-7778.24Probable aquaporin PIP2-6 OS=Arabidopsis thaliana ... [more]
PIP25_ARATH6.409e-7778.44Probable aquaporin PIP2-5 OS=Arabidopsis thaliana ... [more]
PIP22_ORYSJ8.358e-7779.52Probable aquaporin PIP2-2 OS=Oryza sativa subsp. j... [more]
PIP25_MAIZE1.422e-7682.10Aquaporin PIP2-5 OS=Zea mays GN=PIP2-5 PE=1 SV=1[more]
PIP21_ARATH1.855e-7678.79Aquaporin PIP2-1 OS=Arabidopsis thaliana GN=PIP2-1... [more]
PIP24_MAIZE2.419e-7679.52Aquaporin PIP2-4 OS=Zea mays GN=PIP2-4 PE=1 SV=1[more]
PIP23_MAIZE2.419e-7679.52Aquaporin PIP2-3 OS=Zea mays GN=PIP2-3 PE=2 SV=1[more]
PIP25_ORYSJ2.885e-7475.90Aquaporin PIP2-5 OS=Oryza sativa subsp. japonica G... [more]
PIP13_ARATH2.414e-7377.99Aquaporin PIP1-3 OS=Arabidopsis thaliana GN=PIP1-3... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUSDA-FP_00218 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00218 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623127 ID=BQ623127; Name=BQ623127; organism=Citrus sinensis; type=EST; length=610bp
CTGGCATTTCTGGTGGTCACATTAACCCTGCTGTGACGTTTGGGCCTGTT
CTTGGCAAGGAAGGTATCATTGATCAGGGCTGTGGCTTACATGGTGGCTC
AGTGCTTGGGTGCCATTTGCGGTGTTGGTTTGGTCAAGGCCTTCATGAAG
CATGAGTACAACTCACTTGGTGGTGGTGCTAACACTGTGGCTTCTGGCTA
CAACAAAGGATCAGCCTTGGGTGCTGAGATTATTGGTACCTTCGTGCTTG
TTTACACAGTCTTCTCGGCCACAGACCCCAAGAGAAGCGCTCGTGACTCT
CACGTGCCCGTTTTGGCTCCACTTCCAATTGGATTTGCTGTGTTCATGGT
TCACTTGGCCACCATCCCCATCACTGGAACGGGCATCAACCCTGCTAGGA
GCTTTGGTGCTGCTGTTATCTACAACAATGACAAGGCCTGGGATGACCAT
TGGATCTTCTGGGTTGGTCCTTTCGTTGGAGCATTGGCTGCAGCGGCATA
CCACCAGTACATCTTGAGGGCTGCTGCTATCAAGGCTTTGGGATCATTCC
GCAACAACCCCTTCAAACTAAGAAAGCAAATTATGATGAATATGAACCAC
CAACCAGAAT
back to top