BQ623127

Overview
NameBQ623127
Unique NameBQ623127
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length610
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9730 contig Csv1_Contig9730:394..1001. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623127 vs. ExPASy Swiss-Prot
Match: PIP11_ORYSJ (Aquaporin PIP1-1 OS=Oryza sativa subsp. japonica GN=PIP1-1 PE=2 SV=1)

HSP 1 Score: 251.906 bits (642), Expect = 2.406e-70
Identity = 119/159 (74.84%), Postives = 133/159 (83.65%), Query Frame = 1
Query:   61 KVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYILRAAAIKA 537
            K+SL RA+ Y+V QCLGAICG G+VK F +  Y   GGGAN VASGY KG  LGAEI+GTF+LVYTVFSATD KR+ARDSHVP+LAPLPIGFAVF+VHLATIPITGTGINPARS GAA+IYN D AW+DHWIFWVGPFVGA  AA YHQ I+RA   K+
Sbjct:  129 KLSLTRAIFYIVMQCLGAICGAGVVKGFQQGLYMGNGGGANVVASGYTKGDGLGAEIVGTFILVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHAWNDHWIFWVGPFVGAALAAIYHQVIIRAIPFKS 287          

HSP 2 Score: 35.039 bits (79), Expect = 2.406e-70
Identity = 15/20 (75.00%), Postives = 17/20 (85.00%), Query Frame = 3
Query:    3 GISGGHINPAVTFGPVLGKE 62
            GISGGHINPAVTFG  L ++
Sbjct:  110 GISGGHINPAVTFGLFLARK 129          
BLAST of BQ623127 vs. ExPASy Swiss-Prot
Match: PIP1_SOLLC (Probable aquaporin PIP-type pTOM75 OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 249.595 bits (636), Expect = 1.184e-69
Identity = 119/154 (77.27%), Postives = 130/154 (84.42%), Query Frame = 1
Query:   61 KVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYILRA 522
            K+SL RAV YMV QCLGAICG G+VK FM   Y  LGGGAN V  GY KG  LGAEIIGTFVLVYTVFSATD KR+ARDSHVP+LAPLPIGFAVF+VHLATIPITGTGINPARS GAA+IYN++ AW+DHWIFWVGP +GA  AA YHQ I+RA
Sbjct:  127 KLSLTRAVFYMVMQCLGAICGAGVVKGFMVGPYQRLGGGANVVNPGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNDEHAWNDHWIFWVGPMIGAALAAIYHQIIIRA 280          

HSP 2 Score: 35.039 bits (79), Expect = 1.184e-69
Identity = 15/20 (75.00%), Postives = 17/20 (85.00%), Query Frame = 3
Query:    3 GISGGHINPAVTFGPVLGKE 62
            GISGGHINPAVTFG  L ++
Sbjct:  108 GISGGHINPAVTFGLFLARK 127          
BLAST of BQ623127 vs. ExPASy Swiss-Prot
Match: PIP13_MAIZE (Aquaporin PIP1-3/PIP1-4 OS=Zea mays GN=PIP1-3 PE=2 SV=1)

HSP 1 Score: 248.825 bits (634), Expect = 2.013e-69
Identity = 116/159 (72.96%), Postives = 131/159 (82.39%), Query Frame = 1
Query:   61 KVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYILRAAAIKA 537
            K+SL RA+ Y++ QCLGAICG G+VK F +  Y   GGGAN VA GY KG  LGAEI+GTF+LVYTVFSATD KR+ARDSHVP+LAPLPIGFAVF+VHLATIPITGTGINPARS GAA+IYN D AW DHWIFWVGPF+GA  AA YHQ I+RA   K+
Sbjct:  132 KLSLTRAIFYIIMQCLGAICGAGVVKGFQQGLYMGNGGGANVVAPGYTKGDGLGAEIVGTFILVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNRDHAWSDHWIFWVGPFIGAALAAIYHQVIIRAIPFKS 290          

HSP 2 Score: 35.039 bits (79), Expect = 2.013e-69
Identity = 15/20 (75.00%), Postives = 17/20 (85.00%), Query Frame = 3
Query:    3 GISGGHINPAVTFGPVLGKE 62
            GISGGHINPAVTFG  L ++
Sbjct:  113 GISGGHINPAVTFGLFLARK 132          
BLAST of BQ623127 vs. ExPASy Swiss-Prot
Match: PIP12_MAIZE (Aquaporin PIP1-2 OS=Zea mays GN=PIP1-2 PE=1 SV=1)

HSP 1 Score: 248.054 bits (632), Expect = 3.424e-69
Identity = 115/159 (72.33%), Postives = 132/159 (83.02%), Query Frame = 1
Query:   61 KVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYILRAAAIKA 537
            K+SL RA+ Y++ QCLGA+CG G+VK F +  Y   GGGAN VA GY KG  LGAEI+GTF+LVYTVFSATD KR+ARDSHVP+LAPLPIGFAVF+VHLATIPITGTGINPARS GAA+IYN D AW+DHWIFWVGPF+GA  AA YHQ I+RA   K+
Sbjct:  129 KLSLTRALFYIIMQCLGAVCGAGVVKGFQQGLYMGNGGGANVVAPGYTKGDGLGAEIVGTFILVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNRDHAWNDHWIFWVGPFIGAALAAIYHQVIIRAIPFKS 287          

HSP 2 Score: 35.039 bits (79), Expect = 3.424e-69
Identity = 15/20 (75.00%), Postives = 17/20 (85.00%), Query Frame = 3
Query:    3 GISGGHINPAVTFGPVLGKE 62
            GISGGHINPAVTFG  L ++
Sbjct:  110 GISGGHINPAVTFGLFLARK 129          
BLAST of BQ623127 vs. ExPASy Swiss-Prot
Match: PIP15_MAIZE (Aquaporin PIP1-5 OS=Zea mays GN=PIP1-5 PE=2 SV=1)

HSP 1 Score: 244.973 bits (624), Expect = 2.864e-68
Identity = 116/159 (72.96%), Postives = 129/159 (81.13%), Query Frame = 1
Query:   61 KVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYILRAAAIKA 537
            K+SL RA+ YMV QCLGAICG G+VK F +  Y   GGGAN V  GY KG  LGAEI+GTFVLVYTVFSATD KRSARDSHVP+LAPLPIGFAVF+VHLATIPITGTGINPARS GAA++YN   AW+DHWIFWVGPF+GA  AA YH  I+RA   K+
Sbjct:  128 KLSLTRALFYMVMQCLGAICGAGVVKGFQEGLYMGAGGGANAVNPGYTKGDGLGAEIVGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIVYNRSHAWNDHWIFWVGPFIGAALAAIYHVVIIRALPFKS 286          

HSP 2 Score: 35.039 bits (79), Expect = 2.864e-68
Identity = 15/20 (75.00%), Postives = 17/20 (85.00%), Query Frame = 3
Query:    3 GISGGHINPAVTFGPVLGKE 62
            GISGGHINPAVTFG  L ++
Sbjct:  109 GISGGHINPAVTFGLFLARK 128          
BLAST of BQ623127 vs. ExPASy Swiss-Prot
Match: PIP16_MAIZE (Aquaporin PIP1-6 OS=Zea mays GN=PIP1-6 PE=2 SV=1)

HSP 1 Score: 242.662 bits (618), Expect = 1.080e-67
Identity = 115/159 (72.33%), Postives = 128/159 (80.50%), Query Frame = 1
Query:   61 KVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYILRAAAIKA 537
            K+SL RAV Y+V QCLGA+CG G+VKAF    Y S GGGAN V+ GY KG  LGAE++GTFVLVYTVFSATD KR+ARDSHVP LAPLPIGFAVF+VHLATIPITGTGINPARS GAA+IY+N   W  HWIFWVGPF GA  AA YHQ +LRA   K+
Sbjct:  134 KLSLTRAVYYVVMQCLGAVCGAGVVKAFGSALYESAGGGANAVSPGYTKGDGLGAEVVGTFVLVYTVFSATDAKRTARDSHVPALAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYDNPHGWHGHWIFWVGPFAGAALAAVYHQVVLRAIPFKS 292          

HSP 2 Score: 35.4242 bits (80), Expect = 1.080e-67
Identity = 14/20 (70.00%), Postives = 18/20 (90.00%), Query Frame = 3
Query:    3 GISGGHINPAVTFGPVLGKE 62
            G+SGGHINPAVTFG +L ++
Sbjct:  115 GVSGGHINPAVTFGLLLARK 134          
BLAST of BQ623127 vs. ExPASy Swiss-Prot
Match: PIP13_ORYSJ (Aquaporin PIP 1-3 OS=Oryza sativa subsp. japonica GN=PIP1-3 PE=2 SV=2)

HSP 1 Score: 241.506 bits (615), Expect = 3.123e-67
Identity = 114/159 (71.70%), Postives = 127/159 (79.87%), Query Frame = 1
Query:   61 KVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYILRAAAIKA 537
            K+SL RAV YM  QCLGAICG G+VK F +  Y   GGGAN V  GY KG  LGAEI+GTFVLVYTVFSATD KR+ARDSHVP+LAPLPIGFAVF+VHLATIPITGTGINPARS GAA++YN   AW DHWIFWVGPF+GA  AA YH  ++RA   K+
Sbjct:  128 KLSLTRAVFYMAMQCLGAICGAGVVKGFQRGLYMGSGGGANAVNPGYTKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIVYNRAHAWHDHWIFWVGPFIGAALAAIYHVVVIRAIPFKS 286          

HSP 2 Score: 35.039 bits (79), Expect = 3.123e-67
Identity = 15/20 (75.00%), Postives = 17/20 (85.00%), Query Frame = 3
Query:    3 GISGGHINPAVTFGPVLGKE 62
            GISGGHINPAVTFG  L ++
Sbjct:  109 GISGGHINPAVTFGLFLARK 128          
BLAST of BQ623127 vs. ExPASy Swiss-Prot
Match: PIP2_PEA (Probable aquaporin PIP-type 7a OS=Pisum sativum GN=TRG-31 PE=2 SV=2)

HSP 1 Score: 238.039 bits (606), Expect = 3.406e-66
Identity = 113/160 (70.62%), Postives = 129/160 (80.62%), Query Frame = 1
Query:   61 KVSLIRAVAYMVAQCLGAICGVGLVKAFM-KHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYILRAAAIKA 537
            K+SL RA+ YMV Q LGAICG G+VK F  K  +  L GGAN VA GY KG  LGAEI+GTF+LVYTVFSATD KRSARDSHVP+LAPLPIGFAVF+VHLATIPITGTGINPARS GAA+++N    W+DHWIFWVGPF+GA  AA YHQ ++RA   K+
Sbjct:  129 KLSLTRAIFYMVMQVLGAICGAGVVKGFEGKQRFGDLNGGANFVAPGYTKGDGLGAEIVGTFILVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIVFNKKIGWNDHWIFWVGPFIGAALAALYHQVVIRAIPFKS 288          

HSP 2 Score: 35.039 bits (79), Expect = 3.406e-66
Identity = 15/20 (75.00%), Postives = 17/20 (85.00%), Query Frame = 3
Query:    3 GISGGHINPAVTFGPVLGKE 62
            GISGGHINPAVTFG  L ++
Sbjct:  110 GISGGHINPAVTFGLFLARK 129          
BLAST of BQ623127 vs. ExPASy Swiss-Prot
Match: PIP11_MAIZE (Aquaporin PIP1-1 OS=Zea mays GN=PIP1-1 PE=1 SV=1)

HSP 1 Score: 234.572 bits (597), Expect = 4.411e-63
Identity = 113/159 (71.07%), Postives = 126/159 (79.25%), Query Frame = 1
Query:   61 KVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYILRAAAIKA 537
            K+SL RAV Y++ QCLGAICG G+VK F +  Y   GG  N VA GY KG  LGAEI+GTF+LVYTVFSATD KR ARDSHVP+LAPLPIGFAVF+VHLAT+ ITGTGINPARS GAAVIYN   AW DHWIFWVGPF+GA  AA YHQ I+RA   K+
Sbjct:  127 KLSLTRAVFYIIMQCLGAICGRGVVKGFQQGLYMGNGGRRNVVAPGYTKGDGLGAEIVGTFILVYTVFSATDAKRRARDSHVPILAPLPIGFAVFLVHLATMGITGTGINPARSLGAAVIYNQHHAWADHWIFWVGPFIGAALAAIYHQVIIRAIPFKS 285          

HSP 2 Score: 28.1054 bits (61), Expect = 4.411e-63
Identity = 14/20 (70.00%), Postives = 16/20 (80.00%), Query Frame = 3
Query:    3 GISGGHINPAVTFGPVLGKE 62
            GISG HINPAVTFG  L ++
Sbjct:  109 GISG-HINPAVTFGLFLARK 127          
BLAST of BQ623127 vs. ExPASy Swiss-Prot
Match: PIP28_ORYSJ (Probable aquaporin PIP2-8 OS=Oryza sativa subsp. japonica GN=PIP2-8 PE=2 SV=1)

HSP 1 Score: 213.772 bits (543), Expect = 1.794e-58
Identity = 108/165 (65.45%), Postives = 124/165 (75.15%), Query Frame = 1
Query:   61 KVSLIRAVAYMVAQCLGAICGVGLVKAFMKH-EYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVI--YNNDKAWDDHWIFWVGPFVGALAAAAYHQYILRAAAIKALGS 546
            +VSL RA  Y +AQC+GA+CG GL +A     +Y   GGGAN +A+GY+ G+ + AE++GTFVLVYTVFSATDPKR ARDSHVPVLAPLPIG AV +VHLATIPITGTGINPARS G A++      KAW   WIFWVGPF GA AA  YH YILR AA KA  S
Sbjct:  108 RVSLPRAALYTMAQCVGAVCGAGLARAMHGGGQYARHGGGANELAAGYSAGAGVVAEMVGTFVLVYTVFSATDPKRKARDSHVPVLAPLPIGLAVLVVHLATIPITGTGINPARSLGPALVLGLGTTKAWSHLWIFWVGPFAGAAAAMIYHHYILRGAAAKAFAS 272          

HSP 2 Score: 33.4982 bits (75), Expect = 1.794e-58
Identity = 14/19 (73.68%), Postives = 16/19 (84.21%), Query Frame = 3
Query:    3 GISGGHINPAVTFGPVLGK 59
            GISGGH+NPAVTF  VL +
Sbjct:   89 GISGGHMNPAVTFAMVLAR 107          
The following BLAST results are available for this feature:
BLAST of BQ623127 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 159
Match NameE-valueIdentityDescription
PIP11_ORYSJ2.406e-7074.84Aquaporin PIP1-1 OS=Oryza sativa subsp. japonica G... [more]
PIP1_SOLLC1.184e-6977.27Probable aquaporin PIP-type pTOM75 OS=Solanum lyco... [more]
PIP13_MAIZE2.013e-6972.96Aquaporin PIP1-3/PIP1-4 OS=Zea mays GN=PIP1-3 PE=2... [more]
PIP12_MAIZE3.424e-6972.33Aquaporin PIP1-2 OS=Zea mays GN=PIP1-2 PE=1 SV=1[more]
PIP15_MAIZE2.864e-6872.96Aquaporin PIP1-5 OS=Zea mays GN=PIP1-5 PE=2 SV=1[more]
PIP16_MAIZE1.080e-6772.33Aquaporin PIP1-6 OS=Zea mays GN=PIP1-6 PE=2 SV=1[more]
PIP13_ORYSJ3.123e-6771.70Aquaporin PIP 1-3 OS=Oryza sativa subsp. japonica ... [more]
PIP2_PEA3.406e-6670.63Probable aquaporin PIP-type 7a OS=Pisum sativum GN... [more]
PIP11_MAIZE4.411e-6371.07Aquaporin PIP1-1 OS=Zea mays GN=PIP1-1 PE=1 SV=1[more]
PIP28_ORYSJ1.794e-5865.45Probable aquaporin PIP2-8 OS=Oryza sativa subsp. j... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00218 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00218 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623127 ID=BQ623127; Name=BQ623127; organism=Citrus sinensis; type=EST; length=610bp
CTGGCATTTCTGGTGGTCACATTAACCCTGCTGTGACGTTTGGGCCTGTT
CTTGGCAAGGAAGGTATCATTGATCAGGGCTGTGGCTTACATGGTGGCTC
AGTGCTTGGGTGCCATTTGCGGTGTTGGTTTGGTCAAGGCCTTCATGAAG
CATGAGTACAACTCACTTGGTGGTGGTGCTAACACTGTGGCTTCTGGCTA
CAACAAAGGATCAGCCTTGGGTGCTGAGATTATTGGTACCTTCGTGCTTG
TTTACACAGTCTTCTCGGCCACAGACCCCAAGAGAAGCGCTCGTGACTCT
CACGTGCCCGTTTTGGCTCCACTTCCAATTGGATTTGCTGTGTTCATGGT
TCACTTGGCCACCATCCCCATCACTGGAACGGGCATCAACCCTGCTAGGA
GCTTTGGTGCTGCTGTTATCTACAACAATGACAAGGCCTGGGATGACCAT
TGGATCTTCTGGGTTGGTCCTTTCGTTGGAGCATTGGCTGCAGCGGCATA
CCACCAGTACATCTTGAGGGCTGCTGCTATCAAGGCTTTGGGATCATTCC
GCAACAACCCCTTCAAACTAAGAAAGCAAATTATGATGAATATGAACCAC
CAACCAGAAT
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