BQ623127

Overview
NameBQ623127
Unique NameBQ623127
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length610
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9730 contig Csv1_Contig9730:394..1001. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623127 vs. ExPASy Swiss-Prot
Match: MIP_SHEEP (Lens fiber major intrinsic protein OS=Ovis aries GN=MIP PE=1 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 3.129e-20
Identity = 51/152 (33.55%), Postives = 83/152 (54.61%), Query Frame = 1
Query:   61 KVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYIL 516
            ++SL+RA+ Y+VAQ LGA+ G  ++ +             NT+  G + G A   EI  T   V  +F+  D +R+ R   V     L +GF++ + HL  +  TG G+NPARSF  A++  N   + +HW++WVGP +GA   +  + ++L
Sbjct:   80 QMSLLRAICYVVAQLLGAVAGAAVLYSVTPPAVRG-NLALNTLHPGVSVGQATIVEIFLTLQFVLCIFATYDERRNGRLGSVA----LAVGFSLTLGHLFGMYYTGAGMNPARSFAPAILTRN---FTNHWVYWVGPVIGAGLGSLLYDFLL 223          

HSP 2 Score: 28.8758 bits (63), Expect = 3.129e-20
Identity = 11/19 (57.89%), Postives = 15/19 (78.95%), Query Frame = 3
Query:    6 ISGGHINPAVTFGPVLGKE 62
            ISG H+NPAVTF  ++G +
Sbjct:   62 ISGAHVNPAVTFAFLVGSQ 80          
BLAST of BQ623127 vs. ExPASy Swiss-Prot
Match: AQP2_MOUSE (Aquaporin-2 OS=Mus musculus GN=Aqp2 PE=2 SV=2)

HSP 1 Score: 92.8189 bits (229), Expect = 4.066e-20
Identity = 54/151 (35.76%), Postives = 78/151 (51.66%), Query Frame = 1
Query:   64 VSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYIL 516
            VS +RA  Y+ AQ LGA+ G  ++      E        N + +    G A+  E+  T  LV  +F++TD +RS           L IGF+V + HL  I  TG  +NPARS   AV+      +DDHW+FW+GP VGA+  +  + Y+L
Sbjct:   81 VSFLRAAFYVAAQLLGAVAGAAILHEITPVEIRG-DLAVNALHNNATAGQAVTVELFLTMQLVLCIFASTDERRSDNLGS----PALSIGFSVTLGHLLGIYFTGCSMNPARSLAPAVVTGK---FDDHWVFWIGPLVGAVIGSLLYNYLL 223          

HSP 2 Score: 25.7942 bits (55), Expect = 4.066e-20
Identity = 10/17 (58.82%), Postives = 13/17 (76.47%), Query Frame = 3
Query:    6 ISGGHINPAVTFGPVLG 56
            +SG HINPAVT   ++G
Sbjct:   62 VSGAHINPAVTVACLVG 78          
BLAST of BQ623127 vs. ExPASy Swiss-Prot
Match: AQP6_HUMAN (Aquaporin-6 OS=Homo sapiens GN=AQP6 PE=2 SV=2)

HSP 1 Score: 95.1301 bits (235), Expect = 6.871e-20
Identity = 56/151 (37.09%), Postives = 83/151 (54.97%), Query Frame = 1
Query:   64 VSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYIL 516
            +SL RAVAY+ AQ +GA  G  L+   M  +     G  N V +  + G A+  E++ T  LV  VF++TD ++++            IG +V + HL  I  TG  +NPARSFG A+I      +  HW+FWVGP +GAL A+  + ++L
Sbjct:   95 ISLPRAVAYVAAQLVGATVGAALLYGVMPGDIRETLG-INVVRNSVSTGQAVAVELLLTLQLVLCVFASTDSRQTSGSPATM------IGISVALGHLIGIHFTGCSMNPARSFGPAIIIGK---FTVHWVFWVGPLMGALLASLIYNFVL 235          

HSP 2 Score: 22.7126 bits (47), Expect = 6.871e-20
Identity = 9/16 (56.25%), Postives = 11/16 (68.75%), Query Frame = 3
Query:    9 SGGHINPAVTFGPVLG 56
            SG H NPAVT   ++G
Sbjct:   77 SGAHANPAVTLAFLVG 92          
BLAST of BQ623127 vs. ExPASy Swiss-Prot
Match: AQP2_RAT (Aquaporin-2 OS=Rattus norvegicus GN=Aqp2 PE=1 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 6.879e-20
Identity = 54/155 (34.84%), Postives = 79/155 (50.97%), Query Frame = 1
Query:   64 VSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYILRAAA 528
            VS +RA  Y+ AQ LGA+ G  ++      E        N + +    G A+  E+  T  LV  +F++TD +R            L IGF+V + HL  I  TG  +NPARS   AV+      +DDHW+FW+GP VGA+  +  + Y+L  +A
Sbjct:   81 VSFLRAAFYVAAQLLGAVAGAAILHEITPVEIRG-DLAVNALHNNATAGQAVTVELFLTMQLVLCIFASTDERRGDNLGS----PALSIGFSVTLGHLLGIYFTGCSMNPARSLAPAVVTGK---FDDHWVFWIGPLVGAIIGSLLYNYLLFPSA 227          

HSP 2 Score: 25.7942 bits (55), Expect = 6.879e-20
Identity = 10/17 (58.82%), Postives = 13/17 (76.47%), Query Frame = 3
Query:    6 ISGGHINPAVTFGPVLG 56
            +SG HINPAVT   ++G
Sbjct:   62 VSGAHINPAVTVACLVG 78          
BLAST of BQ623127 vs. ExPASy Swiss-Prot
Match: TIP32_ORYSJ (Probable aquaporin TIP3-2 OS=Oryza sativa subsp. japonica GN=TIP3-2 PE=2 SV=2)

HSP 1 Score: 84.7297 bits (208), Expect = 8.952e-20
Identity = 53/156 (33.97%), Postives = 80/156 (51.28%), Query Frame = 1
Query:   61 KVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGAN----TVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYIL 516
            ++S  RA  Y  AQ LGA+  V L++           GG      T+    ++  AL  E++ TF LVYTV++    +RS        +APL IG       LA  P  G  +NPAR+FG A++  N   W  HW++W+GP +GA  A A +++++
Sbjct:  104 RISFARAALYWAAQLLGAVLAVLLLRL--------ASGGMRPMGFTLGHRIHERHALLLEVVMTFGLVYTVYATAVDRRSGGGD----IAPLAIGLVAGANILAGGPFDGAAMNPARAFGPALVGWN---WRHHWVYWLGPLIGAGMAGALYEFVM 244          

HSP 2 Score: 32.7278 bits (73), Expect = 8.952e-20
Identity = 12/17 (70.59%), Postives = 16/17 (94.12%), Query Frame = 3
Query:    9 SGGHINPAVTFGPVLGK 59
            SGGH+NPAVTFG ++G+
Sbjct:   87 SGGHVNPAVTFGVLVGR 103          
BLAST of BQ623127 vs. ExPASy Swiss-Prot
Match: MIP_RAT (Lens fiber major intrinsic protein (Fragment) OS=Rattus norvegicus GN=Mip PE=1 SV=2)

HSP 1 Score: 88.1965 bits (217), Expect = 1.165e-19
Identity = 49/152 (32.24%), Postives = 81/152 (53.29%), Query Frame = 1
Query:   61 KVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYIL 516
            ++SL+RA  Y+ AQ LGA+ G  ++ +             NT+ +G + G A   EI  T   V  +F+  D +R+ R   V     L +GF++ + HL  +  TG G+NPARSF  A++  N   + +HW++WVGP +G    +  + ++L
Sbjct:   78 QMSLLRAFCYIAAQLLGAVAGAAVLYSVTPPAVRG-NLALNTLHAGVSVGQATTVEIFLTLQFVLCIFATYDERRNGRMGSVA----LAVGFSLTLGHLFGMYYTGAGMNPARSFAPAILTRN---FSNHWVYWVGPIIGGGLGSLLYDFLL 221          

HSP 2 Score: 28.8758 bits (63), Expect = 1.165e-19
Identity = 11/19 (57.89%), Postives = 15/19 (78.95%), Query Frame = 3
Query:    6 ISGGHINPAVTFGPVLGKE 62
            ISG H+NPAVTF  ++G +
Sbjct:   60 ISGAHVNPAVTFAFLVGSQ 78          
BLAST of BQ623127 vs. ExPASy Swiss-Prot
Match: MIP_MOUSE (Lens fiber major intrinsic protein OS=Mus musculus GN=Mip PE=1 SV=2)

HSP 1 Score: 88.1965 bits (217), Expect = 1.165e-19
Identity = 49/152 (32.24%), Postives = 81/152 (53.29%), Query Frame = 1
Query:   61 KVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYIL 516
            ++SL+RA  Y+ AQ LGA+ G  ++ +             NT+ +G + G A   EI  T   V  +F+  D +R+ R   V     L +GF++ + HL  +  TG G+NPARSF  A++  N   + +HW++WVGP +G    +  + ++L
Sbjct:   80 QMSLLRAFCYIAAQLLGAVAGAAVLYSVTPPAVRG-NLALNTLHAGVSVGQATTVEIFLTLQFVLCIFATYDERRNGRMGSVA----LAVGFSLTLGHLFGMYYTGAGMNPARSFAPAILTRN---FSNHWVYWVGPIIGGGLGSLLYDFLL 223          

HSP 2 Score: 28.8758 bits (63), Expect = 1.165e-19
Identity = 11/19 (57.89%), Postives = 15/19 (78.95%), Query Frame = 3
Query:    6 ISGGHINPAVTFGPVLGKE 62
            ISG H+NPAVTF  ++G +
Sbjct:   62 ISGAHVNPAVTFAFLVGSQ 80          
BLAST of BQ623127 vs. ExPASy Swiss-Prot
Match: MIP_CANFA (Lens fiber major intrinsic protein OS=Canis familiaris GN=MIP PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 1.165e-19
Identity = 50/152 (32.89%), Postives = 80/152 (52.63%), Query Frame = 1
Query:   61 KVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYIL 516
            ++SL+RA  YM AQ LGA+ G  ++ +             NT+  G + G A   EI  T   V  +F+  D +R+ R   V     L +GF++ + HL  +  TG G+NPARSF  A++  N   + +HW++WVGP +G    +  + ++L
Sbjct:   80 QMSLLRAFCYMAAQLLGAVAGAAVLYSVTPPAVRG-NLALNTLHPGVSVGQATTVEIFLTLQFVLCIFATYDERRNGRLGSVA----LAVGFSLTLGHLFGMYYTGAGMNPARSFAPAILTRN---FTNHWVYWVGPIIGGGLGSLLYDFLL 223          

HSP 2 Score: 28.8758 bits (63), Expect = 1.165e-19
Identity = 11/19 (57.89%), Postives = 15/19 (78.95%), Query Frame = 3
Query:    6 ISGGHINPAVTFGPVLGKE 62
            ISG H+NPAVTF  ++G +
Sbjct:   62 ISGAHVNPAVTFAFLVGSQ 80          
BLAST of BQ623127 vs. ExPASy Swiss-Prot
Match: TIP22_ORYSJ (Probable aquaporin TIP2-2 OS=Oryza sativa subsp. japonica GN=TIP2-2 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 1.973e-19
Identity = 56/152 (36.84%), Postives = 81/152 (53.29%), Query Frame = 1
Query:   61 KVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFS-ATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYI 513
            +++++  V Y +AQ LGAI G  LV+        + G       SG      +  EII TF LVYTV++ A DPK+ +    +  +AP+ IGF V    L   P +G  +NPARSFG AV   +   + + WI+WVGP VG   A   ++Y+
Sbjct:   96 QITILTGVFYWIAQLLGAIVGAVLVQFCTGVATPTHG------LSGVGAFEGVVMEIIVTFGLVYTVYATAADPKKGS----LGTIAPIAIGFIVGANILVAGPFSGGSMNPARSFGPAVASGD---YTNIWIYWVGPLVGGGLAGLVYRYV 234          

HSP 2 Score: 33.8834 bits (76), Expect = 1.973e-19
Identity = 14/17 (82.35%), Postives = 15/17 (88.24%), Query Frame = 3
Query:    6 ISGGHINPAVTFGPVLG 56
            ISGGH+NPAVTFG  LG
Sbjct:   78 ISGGHVNPAVTFGLALG 94          
BLAST of BQ623127 vs. ExPASy Swiss-Prot
Match: MIP_RANPI (Lens fiber major intrinsic protein OS=Rana pipiens PE=1 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 2.562e-19
Identity = 51/152 (33.55%), Postives = 77/152 (50.66%), Query Frame = 1
Query:   61 KVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYIL 516
            ++SL RA+ Y+ AQ LGA+ G  ++               NT+  G + G A   EI  T   V  +F+  D +R+ R   V     L IGF++ + HL  +  TG  +NPARSF  AV+  N   + +HW++WVGP +G       + +IL
Sbjct:   80 QMSLFRAIFYIAAQLLGAVAGAAVLYGVTPAAIRG-NLALNTLHPGVSLGQATTVEIFLTLQFVLCIFATYDERRNGRLGSVS----LAIGFSLTLGHLFGLYYTGASMNPARSFAPAVLTRN---FTNHWVYWVGPIIGGALGGLVYDFIL 223          

HSP 2 Score: 29.261 bits (64), Expect = 2.562e-19
Identity = 11/19 (57.89%), Postives = 15/19 (78.95%), Query Frame = 3
Query:    6 ISGGHINPAVTFGPVLGKE 62
            +SG HINPAVTF  ++G +
Sbjct:   62 VSGAHINPAVTFAFLIGSQ 80          
The following BLAST results are available for this feature:
BLAST of BQ623127 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 159
Match NameE-valueIdentityDescription
MIP_SHEEP3.129e-2033.55Lens fiber major intrinsic protein OS=Ovis aries G... [more]
AQP2_MOUSE4.066e-2035.76Aquaporin-2 OS=Mus musculus GN=Aqp2 PE=2 SV=2[more]
AQP6_HUMAN6.871e-2037.09Aquaporin-6 OS=Homo sapiens GN=AQP6 PE=2 SV=2[more]
AQP2_RAT6.879e-2034.84Aquaporin-2 OS=Rattus norvegicus GN=Aqp2 PE=1 SV=1[more]
TIP32_ORYSJ8.952e-2033.97Probable aquaporin TIP3-2 OS=Oryza sativa subsp. j... [more]
MIP_RAT1.165e-1932.24Lens fiber major intrinsic protein (Fragment) OS=R... [more]
MIP_MOUSE1.165e-1932.24Lens fiber major intrinsic protein OS=Mus musculus... [more]
MIP_CANFA1.165e-1932.89Lens fiber major intrinsic protein OS=Canis famili... [more]
TIP22_ORYSJ1.973e-1936.84Probable aquaporin TIP2-2 OS=Oryza sativa subsp. j... [more]
MIP_RANPI2.562e-1933.55Lens fiber major intrinsic protein OS=Rana pipiens... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00218 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00218 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623127 ID=BQ623127; Name=BQ623127; organism=Citrus sinensis; type=EST; length=610bp
CTGGCATTTCTGGTGGTCACATTAACCCTGCTGTGACGTTTGGGCCTGTT
CTTGGCAAGGAAGGTATCATTGATCAGGGCTGTGGCTTACATGGTGGCTC
AGTGCTTGGGTGCCATTTGCGGTGTTGGTTTGGTCAAGGCCTTCATGAAG
CATGAGTACAACTCACTTGGTGGTGGTGCTAACACTGTGGCTTCTGGCTA
CAACAAAGGATCAGCCTTGGGTGCTGAGATTATTGGTACCTTCGTGCTTG
TTTACACAGTCTTCTCGGCCACAGACCCCAAGAGAAGCGCTCGTGACTCT
CACGTGCCCGTTTTGGCTCCACTTCCAATTGGATTTGCTGTGTTCATGGT
TCACTTGGCCACCATCCCCATCACTGGAACGGGCATCAACCCTGCTAGGA
GCTTTGGTGCTGCTGTTATCTACAACAATGACAAGGCCTGGGATGACCAT
TGGATCTTCTGGGTTGGTCCTTTCGTTGGAGCATTGGCTGCAGCGGCATA
CCACCAGTACATCTTGAGGGCTGCTGCTATCAAGGCTTTGGGATCATTCC
GCAACAACCCCTTCAAACTAAGAAAGCAAATTATGATGAATATGAACCAC
CAACCAGAAT
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