BQ623127

Overview
NameBQ623127
Unique NameBQ623127
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length610
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9730 contig Csv1_Contig9730:394..1001. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623127 vs. ExPASy Swiss-Prot
Match: TIP1_MEDSA (Probable aquaporin TIP-type OS=Medicago sativa GN=MCP1 PE=2 SV=2)

HSP 1 Score: 89.3521 bits (220), Expect = 2.566e-19
Identity = 52/151 (34.44%), Postives = 82/151 (54.30%), Query Frame = 1
Query:   64 VSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFS-ATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYI 513
            ++L+R + Y++AQ LG+I    L+         + G     ++ G   G AL  EI+ TF LVYTV++ A DPK+     ++ ++AP+ IGF V    L     TG  +NPA SFG AV+     +W +HW++W GP +G   A   ++ +
Sbjct:   97 ITLLRGIVYIIAQLLGSIVCSALLVFVTASSVPAFG-----LSEGVGVGPALVLEIVMTFGLVYTVYATAVDPKKG----NIGIIAPIAIGFIVGANILVGGAFTGASMNPAVSFGPAVV---SWSWSNHWVYWAGPLIGGGIAGLVYEVL 235          

HSP 2 Score: 26.5646 bits (57), Expect = 2.566e-19
Identity = 12/17 (70.59%), Postives = 14/17 (82.35%), Query Frame = 3
Query:    6 ISGGHINPAVTFGPVLG 56
            ISGGH+NPAV FG  +G
Sbjct:   79 ISGGHVNPAV-FGAFVG 94          
BLAST of BQ623127 vs. ExPASy Swiss-Prot
Match: TIP41_ARATH (Aquaporin TIP4-1 OS=Arabidopsis thaliana GN=TIP4-1 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 2.566e-19
Identity = 52/152 (34.21%), Postives = 80/152 (52.63%), Query Frame = 1
Query:   64 VSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSA-TDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYIL 516
            +S+ RA  Y + Q L +     L    + +    +G   +T+ASG +    +  EII TF L++TV++   DPK+ + D   P+L     GF V    LA    +G  +NPARSFG A++  N   W DHW++WVGP +G   A   ++ +L
Sbjct:   92 ISVFRAFLYWIDQLLASSAACFL----LSYLTGGMGTPVHTLASGVSYTQGIIWEIILTFSLLFTVYATIVDPKKGSLDGFGPLLT----GFVVGANILAGGAFSGASMNPARSFGPALVSGN---WTDHWVYWVGPLIGGGLAGFIYENVL 232          

HSP 2 Score: 31.5722 bits (70), Expect = 2.566e-19
Identity = 13/17 (76.47%), Postives = 15/17 (88.24%), Query Frame = 3
Query:    6 ISGGHINPAVTFGPVLG 56
            ISGGH+NPAVT G +LG
Sbjct:   73 ISGGHLNPAVTLGLLLG 89          
BLAST of BQ623127 vs. ExPASy Swiss-Prot
Match: MIP_CHICK (Lens fiber major intrinsic protein OS=Gallus gallus GN=MIP PE=1 SV=2)

HSP 1 Score: 94.7449 bits (234), Expect = 3.819e-19
Identity = 57/153 (37.25%), Postives = 87/153 (56.86%), Query Frame = 1
Query:   61 KVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYN-SLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYIL 516
            ++SL RA+ Y++AQ LGA+ G G++          +LG  A   + G  +G+ +  E++ T   +  VF++ D +   R    P  A LP+GF++ + HL  IP TG G+NPARSF  AVI  N   + +HW+FW GP +GA  AA  ++  L
Sbjct:   80 QLSLPRALGYLLAQLLGALAGAGVLYGVTPAAVRGTLGLSALHPSVGPGQGTVV--ELLLTAQFILCVFASFDDRHDGR----PGSAALPVGFSLALGHLFGIPFTGAGMNPARSFAPAVITRN---FTNHWVFWAGPLLGAALAALLYELAL 223          
BLAST of BQ623127 vs. ExPASy Swiss-Prot
Match: MIP_CAVPO (Lens fiber major intrinsic protein OS=Cavia porcellus GN=MIP PE=1 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 5.636e-19
Identity = 49/152 (32.24%), Postives = 80/152 (52.63%), Query Frame = 1
Query:   61 KVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYIL 516
            ++SL+RA  YM AQ LGA+ G  ++ +             NT+ +G +   A   EI  T   V  +F+  D +R+ R   V     L +GF++ + HL  +  TG G+NPARSF  A++  N   + +HW++WVGP +G    +  + ++L
Sbjct:   80 QMSLLRAFCYMAAQLLGAVAGAAVLYSVTPPAVRG-NLALNTLHAGVSVXQATTVEIFLTLQFVLCIFATYDERRNGRLGSVA----LAVGFSLTLGHLFGMYYTGAGMNPARSFAPAILTRN---FTNHWVYWVGPIIGGGLGSLLYDFLL 223          

HSP 2 Score: 28.4906 bits (62), Expect = 5.636e-19
Identity = 11/19 (57.89%), Postives = 15/19 (78.95%), Query Frame = 3
Query:    6 ISGGHINPAVTFGPVLGKE 62
            ISG H+NPAVTF  ++G +
Sbjct:   62 ISGAHVNPAVTFXFLVGSQ 80          
BLAST of BQ623127 vs. ExPASy Swiss-Prot
Match: TIP22_ARATH (Probable aquaporin TIP2-2 OS=Arabidopsis thaliana GN=TIP2-2 PE=1 SV=2)

HSP 1 Score: 84.7297 bits (208), Expect = 5.644e-19
Identity = 58/148 (39.19%), Postives = 80/148 (54.05%), Query Frame = 1
Query:   64 VSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFS-ATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFV-GALAAAAY 501
            +++I    Y +AQCLG+I    L+      E     G    VA+G      +  EI+ TF LVYTV++ A DPK+ +    +  +AP+ IGF V    LA  P +G  +NPARSFG AV+  +   +   WI+WVGP V GALA   Y
Sbjct:   96 ITVITGFFYWIAQCLGSIVACLLLVFVTNGESVPTHG----VAAGLGAIEGVVMEIVVTFALVYTVYATAADPKKGS----LGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVVSGD---FSQIWIYWVGPLVGGALAGLIY 232          

HSP 2 Score: 30.0314 bits (66), Expect = 5.644e-19
Identity = 12/17 (70.59%), Postives = 14/17 (82.35%), Query Frame = 3
Query:    6 ISGGHINPAVTFGPVLG 56
            ISGGH+NPAVT G  +G
Sbjct:   77 ISGGHLNPAVTLGLAVG 93          
BLAST of BQ623127 vs. ExPASy Swiss-Prot
Match: TIP23_ARATH (Aquaporin TIP2-3 OS=Arabidopsis thaliana GN=TIP2-3 PE=1 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 5.644e-19
Identity = 58/148 (39.19%), Postives = 81/148 (54.73%), Query Frame = 1
Query:   64 VSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFS-ATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFV-GALAAAAY 501
            ++LI    Y +AQCLG+I    L+  F+    N      + V++G      +  EI+ TF LVYTV++ A DPK+ +    +  +AP+ IGF V    LA  P +G  +NPARSFG AV+  +       WI+WVGP V GALA   Y
Sbjct:   96 ITLITGFFYWIAQCLGSIVAC-LLLVFVT---NGKSVPTHGVSAGLGAVEGVVMEIVVTFALVYTVYATAADPKKGS----LGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVVSGD---LSQIWIYWVGPLVGGALAGLIY 232          

HSP 2 Score: 30.4166 bits (67), Expect = 5.644e-19
Identity = 12/17 (70.59%), Postives = 14/17 (82.35%), Query Frame = 3
Query:    6 ISGGHINPAVTFGPVLG 56
            ISGGH+NPAVT G  +G
Sbjct:   77 ISGGHLNPAVTLGLAIG 93          
BLAST of BQ623127 vs. ExPASy Swiss-Prot
Match: MIP_HUMAN (Lens fiber major intrinsic protein OS=Homo sapiens GN=MIP PE=1 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 1.612e-18
Identity = 48/152 (31.58%), Postives = 79/152 (51.97%), Query Frame = 1
Query:   61 KVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYIL 516
            ++SL+RA  YM AQ LGA+ G  ++ +             NT+    + G A   EI  T   V  +F+  D +R+ +   V     L +GF++ + HL  +  TG G+NPARSF  A++  N   + +HW++WVGP +G    +  + ++L
Sbjct:   80 QMSLLRAFCYMAAQLLGAVAGAAVLYSVTPPAVRG-NLALNTLHPAVSVGQATTVEIFLTLQFVLCIFATYDERRNGQLGSVA----LAVGFSLALGHLFGMYYTGAGMNPARSFAPAILTGN---FTNHWVYWVGPIIGGGLGSLLYDFLL 223          

HSP 2 Score: 28.8758 bits (63), Expect = 1.612e-18
Identity = 11/19 (57.89%), Postives = 15/19 (78.95%), Query Frame = 3
Query:    6 ISGGHINPAVTFGPVLGKE 62
            ISG H+NPAVTF  ++G +
Sbjct:   62 ISGAHVNPAVTFAFLVGSQ 80          
BLAST of BQ623127 vs. ExPASy Swiss-Prot
Match: AQPZ_SYNY3 (Aquaporin Z OS=Synechocystis sp. (strain PCC 6803) GN=aqpZ PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.319e-17
Identity = 51/152 (33.55%), Postives = 71/152 (46.71%), Query Frame = 1
Query:   88 YMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVAS---------GYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAA-AYHQYI 513
            Y+ AQ LGAI     +    +   N    G+N +A+         GY   +AL  E + TF+ +  +   TD    A        AP  IG A+ ++HL +IPIT T +NPARS G A+   N       W+FW+ P  GAL A   YH  +
Sbjct:   91 YIGAQVLGAIVASLFIFIVAQGGPNFSLDGSNPLATNGFGDHSPQGYGFLAALLIEFVLTFIFLIVILGVTDKTAPAG------FAPAAIGLALTLIHLISIPITNTSVNPARSTGVALFCGNPALIGQLWLFWLAPIAGALLAGFVYHNVL 236          

HSP 2 Score: 33.113 bits (74), Expect = 1.319e-17
Identity = 18/35 (51.43%), Postives = 20/35 (57.14%), Query Frame = 3
Query:    6 ISGGHINPAVTFGPVLGKEGIIDQGCGLHGGSVLG 110
            ISGGH NPAV+FG  +GK     Q     G  VLG
Sbjct:   64 ISGGHFNPAVSFGLWMGKRFPGSQLAPYIGAQVLG 98          
BLAST of BQ623127 vs. ExPASy Swiss-Prot
Match: TIP_ANTMA (Probable aquaporin TIP-type OS=Antirrhinum majus GN=DIP PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 2.737e-17
Identity = 59/157 (37.58%), Postives = 86/157 (54.78%), Query Frame = 1
Query:   64 VSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFS-ATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFV-GALAAAAYHQYILRAAA 528
            ++++  + Y +AQCLG+     L+K       N L    + VA+G +    +  EII TF LVYTV++ A DPK+ +    + V+AP+ IGF V    LA  P +G  +NPARSFG AV   +   +  +WI+W GP + GALA   Y    + A A
Sbjct:   96 ITILTGLFYWIAQCLGSTVACLLLKFVT----NGLSVPTHGVAAGMDAIQGVVMEIIITFALVYTVYATAADPKKGS----LGVIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVASGD---FSQNWIYWAGPLIGGALAGFIYGDVFITAHA 241          
BLAST of BQ623127 vs. ExPASy Swiss-Prot
Match: AQP6_RAT (Aquaporin-6 OS=Rattus norvegicus GN=Aqp6 PE=1 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.890e-17
Identity = 58/156 (37.18%), Postives = 78/156 (50.00%), Query Frame = 1
Query:   64 VSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGG-----GANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYIL 516
            +SL RAVAY+ AQ  GA  G  L+           GG     G N V +  + G A+  E++ T  LV  VF++ D +++             IG +V + HL  I  TG  +NPARSFG AVI         HWIFWVGP  GA+ A+  + +IL
Sbjct:   92 ISLPRAVAYIAAQLAGATVGAALLYGVTP------GGVRETLGVNVVHNSTSTGQAVAVELVLTLQLVLCVFASMDSRQTLGSPAAM------IGTSVALGHLIGIYFTGCSMNPARSFGPAVIVGKFAV---HWIFWVGPLTGAVLASLIYNFIL 232          

HSP 2 Score: 23.0978 bits (48), Expect = 2.890e-17
Identity = 9/16 (56.25%), Postives = 11/16 (68.75%), Query Frame = 3
Query:    9 SGGHINPAVTFGPVLG 56
            SG H NPAVT   ++G
Sbjct:   74 SGAHANPAVTLAYLVG 89          
The following BLAST results are available for this feature:
BLAST of BQ623127 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 159
Match NameE-valueIdentityDescription
TIP1_MEDSA2.566e-1934.44Probable aquaporin TIP-type OS=Medicago sativa GN=... [more]
TIP41_ARATH2.566e-1934.21Aquaporin TIP4-1 OS=Arabidopsis thaliana GN=TIP4-1... [more]
MIP_CHICK3.819e-1937.25Lens fiber major intrinsic protein OS=Gallus gallu... [more]
MIP_CAVPO5.636e-1932.24Lens fiber major intrinsic protein OS=Cavia porcel... [more]
TIP22_ARATH5.644e-1939.19Probable aquaporin TIP2-2 OS=Arabidopsis thaliana ... [more]
TIP23_ARATH5.644e-1939.19Aquaporin TIP2-3 OS=Arabidopsis thaliana GN=TIP2-3... [more]
MIP_HUMAN1.612e-1831.58Lens fiber major intrinsic protein OS=Homo sapiens... [more]
AQPZ_SYNY31.319e-1733.55Aquaporin Z OS=Synechocystis sp. (strain PCC 6803)... [more]
TIP_ANTMA2.737e-1737.58Probable aquaporin TIP-type OS=Antirrhinum majus G... [more]
AQP6_RAT2.890e-1737.18Aquaporin-6 OS=Rattus norvegicus GN=Aqp6 PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00218 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00218 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623127 ID=BQ623127; Name=BQ623127; organism=Citrus sinensis; type=EST; length=610bp
CTGGCATTTCTGGTGGTCACATTAACCCTGCTGTGACGTTTGGGCCTGTT
CTTGGCAAGGAAGGTATCATTGATCAGGGCTGTGGCTTACATGGTGGCTC
AGTGCTTGGGTGCCATTTGCGGTGTTGGTTTGGTCAAGGCCTTCATGAAG
CATGAGTACAACTCACTTGGTGGTGGTGCTAACACTGTGGCTTCTGGCTA
CAACAAAGGATCAGCCTTGGGTGCTGAGATTATTGGTACCTTCGTGCTTG
TTTACACAGTCTTCTCGGCCACAGACCCCAAGAGAAGCGCTCGTGACTCT
CACGTGCCCGTTTTGGCTCCACTTCCAATTGGATTTGCTGTGTTCATGGT
TCACTTGGCCACCATCCCCATCACTGGAACGGGCATCAACCCTGCTAGGA
GCTTTGGTGCTGCTGTTATCTACAACAATGACAAGGCCTGGGATGACCAT
TGGATCTTCTGGGTTGGTCCTTTCGTTGGAGCATTGGCTGCAGCGGCATA
CCACCAGTACATCTTGAGGGCTGCTGCTATCAAGGCTTTGGGATCATTCC
GCAACAACCCCTTCAAACTAAGAAAGCAAATTATGATGAATATGAACCAC
CAACCAGAAT
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