BQ623129

Overview
NameBQ623129
Unique NameBQ623129
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length553
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8578 contig Csv1_Contig8578:57..609. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623129 vs. ExPASy Swiss-Prot
Match: GLT2_ARATH (Germin-like protein subfamily T member 2 OS=Arabidopsis thaliana GN=At1g18980 PE=2 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 2.032e-31
Identity = 74/169 (43.79%), Postives = 104/169 (61.54%), Query Frame = 3
Query:   15 SSSNAMVNDFCVADLKLSDSPAGYPCVPPAMVTADDFVFSGLGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSANTVYVKTLKKGDIMIFPQGLLHFQVNSGADGALGFVSFNSPNPGLQITDFALFANN 521
            SS +  + DFCV DLK S S  G+PC   + V+A DF FSGLG   NT++    AV+PA V  FP +N LGLS+  ++ A GGV P H+HP A+E  +V+ G +  GF++++ NT++ K L  G++ + P+GL+HFQ N G   A    SFNS  PG  +    LF +N
Sbjct:   27 SSDSDPLQDFCVGDLKASPSINGFPC--KSSVSASDFFFSGLGGPLNTSTPNGVAVSPANVLTFPGLNTLGLSMNNVEFAPGGVNPPHSHPRATEAGVVIEGSVFVGFLTTN-NTLFSKVLNAGEMFVVPRGLVHFQWNVGKVKARLITSFNSQLPGSAVLPSTLFGSN 192          
BLAST of BQ623129 vs. ExPASy Swiss-Prot
Match: GL112_ARATH (Putative germin-like protein subfamily 1 member 12 OS=Arabidopsis thaliana GN=At5g38960 PE=2 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 4.526e-31
Identity = 79/179 (44.13%), Postives = 104/179 (58.10%), Query Frame = 3
Query:    6 FVSSSSNAMVNDFCVADLKLSDSPA------GYPCVPPAMVTADDFVFSGLGVAGNT-TSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISS-SANTVYVKTLKKGDIMIFPQGLLHFQVNSGADGALGFVSFNSPNPGLQITDFALFAN 518
            F  +S  + + DFC+      ++PA      G  C  P +VTADDF FSGL  A  T +S + + VT   V Q P +N LG+SL R+D    G  P HTHP A+EILLV  G +  GF SS   N ++ KTL KGD+ +FP+GL+HFQVN G   A+ F S +S NPG+ I    LF +
Sbjct:   21 FAIASDPSPLQDFCIG----VNTPANALFVNGKFCKDPKLVTADDFYFSGLDKARTTESSPVGSNVTTVNVNQIPGLNTLGISLVRIDYGINGQNPPHTHPRATEILLVQEGTLFVGFFSSFPENRLFNKTLNKGDVFVFPEGLIHFQVNIGKQPAVAFASLSSQNPGVIIIGNTLFGS 195          
BLAST of BQ623129 vs. ExPASy Swiss-Prot
Match: GL23_ARATH (Germin-like protein subfamily 2 member 3 OS=Arabidopsis thaliana GN=GLP8 PE=2 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 7.721e-31
Identity = 72/174 (41.38%), Postives = 103/174 (59.20%), Query Frame = 3
Query:    3 AFVSSSSNAMVNDFCVADLKLSDSPAGYPCVPPAMVTADDFVFSGLGVAGNTT-SIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSANTVYVKTLKKGDIMIFPQGLLHFQVNSGADGALGFVSFNSPNPGLQITDFALFANN 521
            A ++ +   M+ DFCVADL       GYPC  PA VT +DF F GL  A  T  S + +AVT A V + P +N LG+S++R+D A GG+ P H HP ASE + V+ G +  GF++++   +  K + KGD+ +FP+ LLHFQ N     A    +F+S  PG Q+   +LF +N
Sbjct:   17 AHMALADTNMLQDFCVADLSNGLKVNGYPCKDPAKVTPEDFYFIGLATAAATANSSMGSAVTGANVEKVPGLNTLGVSISRIDYAPGGLNPPHLHPRASEAIFVLEGRLFVGFLTTTGKLI-SKHVNKGDVFVFPKALLHFQQNPNKAPASVLAAFDSQLPGTQVVGPSLFGSN 189          
BLAST of BQ623129 vs. ExPASy Swiss-Prot
Match: GL12_ORYSJ (Germin-like protein 1-2 OS=Oryza sativa subsp. japonica GN=Os01g0705100 PE=2 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 1.008e-30
Identity = 68/161 (42.24%), Postives = 102/161 (63.35%), Query Frame = 3
Query:   33 VNDFCVADLKLSDSPAGYPCVPPAMVTADDFVFSGLGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSANTVYVKTLKKGDIMIFPQGLLHFQVNSGADGALGFVSFNSPNPGLQITDFALFA 515
            + D CVADL+ + +  G+PC P A V +DDF    +  A +T++      T A V+ FP +N LGLS+ R DLA GG+ P H+HP ASE++LV+ G +  GF +++AN ++ K +++ ++ + P+GL HFQ+N GA  A     F+S +PGL    FALFA
Sbjct:   34 LQDICVADLRAATAVDGFPCKPTASVVSDDFFCDAIVQAPSTSNPFGVNSTRATVSAFPGLNTLGLSITRTDLAPGGLNPPHSHPRASELVLVLSGEVMVGF-TTAANRLFSKVVREKELFVVPRGLQHFQLNVGAGNASFVAMFDSQSPGLVTPTFALFA 193          
BLAST of BQ623129 vs. ExPASy Swiss-Prot
Match: GL17_ARATH (Germin-like protein subfamily 1 member 7 OS=Arabidopsis thaliana GN=At3g05950 PE=2 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 1.317e-30
Identity = 75/181 (41.44%), Postives = 104/181 (57.46%), Query Frame = 3
Query:    3 AFVSSSSNAMVNDFCVADLKLSDSPA----GYPCVPPAMVTADDFVFSGLGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSA--NTVYVKTLKKGDIMIFPQGLLHFQVNSGADGALGFVSFNSPNPGLQITDFALFANNLS 527
            +FVS    + + DFCVA   + D+      G  C  P  V A+DF  SGL +AGNT + + + VT   V + P +N LG+SL R+D A GG  P HTHP A+EIL+VV G +  GF++S+   N ++ K L  GD+ +FP G++HFQVN G   A+ F    S NPG      A+F +  S
Sbjct:   20 SFVSCYDPSPLQDFCVA---VDDASGVFVNGKFCKDPKYVKAEDFFTSGLNIAGNTINRVGSNVTNVNVDKIPGLNTLGVSLVRIDFAPGGQNPPHTHPRATEILVVVEGTLLVGFVTSNQDNNRLFSKVLYPGDVFVFPIGMIHFQVNVGRTNAVAFAGLGSQNPGTITIADAVFGSKPS 197          
BLAST of BQ623129 vs. ExPASy Swiss-Prot
Match: GL38_ORYSJ (Germin-like protein 3-8 OS=Oryza sativa subsp. japonica GN=Os03g0804700 PE=2 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 2.246e-30
Identity = 72/171 (42.11%), Postives = 101/171 (59.06%), Query Frame = 3
Query:   33 VNDFCVA------DLKLSDSPA--GYPCVPPAMVTADDFVFSGLGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSANTVYVKTLKKGDIMIFPQGLLHFQVNSGADGALGFVSFNSPNPGLQITDFALFANN 521
            V DFCVA      D   +  PA  G+PC P + V +DDF F+GL VA +T +     VT A    FP +N LG+S+ R+DLA GGV P+H+HP A+E++ VV G + AGF+ S+A   Y K L +G+  + P+G++HFQ N G   A    +FNS  PG+      LF ++
Sbjct:   30 VQDFCVAVVPRAGDAAAAACPAYPGFPCKPASTVVSDDFFFAGLAVASDTDNRFGFNVTAANAETFPGLNTLGVSIGRVDLAPGGVNPLHSHPRATELIHVVAGRVLAGFV-STAGEFYSKVLGEGETFVVPRGMIHFQYNVGGVAAQVITAFNSQMPGVVAAGSTLFGSD 199          
BLAST of BQ623129 vs. ExPASy Swiss-Prot
Match: GL37_ORYSJ (Germin-like protein 3-7 OS=Oryza sativa subsp. japonica GN=GER7 PE=2 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 8.536e-30
Identity = 70/164 (42.68%), Postives = 100/164 (60.98%), Query Frame = 3
Query:   33 VNDFCVADLKLSD--SPA--GYPCVPPAMVTADDFVFSGLGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSANTVYVKTLKKGDIMIFPQGLLHFQVNSGADGALGFVSFNSPNPGLQITDFALF 512
            + DFCVA  +     SPA  G+PC P + V +DDF F+GL  AG+T +   A++ P  V  FPA+N LG+++ R+DLA GGV P+H+HP A+E++ V+ G +  GF+ S+A   Y K + +G+    P+GL+HFQ N G   A     FNS  PG+     ALF
Sbjct:   40 IQDFCVAVPRAGGEASPAYPGFPCKPASAVVSDDFFFAGLAAAGSTDNPFGASLKPGNVEAFPALNTLGVAINRVDLAPGGVNPLHSHPRAAELVHVITGRMLVGFV-STAGKYYSKVVGEGETFAIPRGLMHFQYNPGNASARAMTVFNSQLPGVVPAATALF 202          
BLAST of BQ623129 vs. ExPASy Swiss-Prot
Match: GL24_ORYSJ (Germin-like protein 2-4 OS=Oryza sativa subsp. japonica GN=Os02g0532500 PE=2 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 1.115e-29
Identity = 76/181 (41.99%), Postives = 109/181 (60.22%), Query Frame = 3
Query:   33 VNDFCVAD------LKLSDSPAGYPCVPPAMVTADDFVFSGLGVAGN---TTSIINAAVTPAFVAQFPAVNGLGLSLARLDL-AKGGVIPIHTHPAASEILLVVHGCITAGFISSSANTVYVKTLKKGDIMIFPQGLLHFQVNSGADGALGFVSFNSPNPGLQITDFALFANNLSSQLVEQ 545
            V DFCV D      ++L+  PA YPC  PA +TA DF FSG+  AGN    T     +VTP   AQFP ++ LG+S AR DL A GGV P H HP A+E  LV+ G + AGF+ S    ++ K L++G++M+FP+ ++HFQ+N G   A  + +FNS NPG+      +F + +   ++E+
Sbjct:   28 VQDFCVPDAGRGRPVELAMLPA-YPCRSPANLTAGDFAFSGVRAAGNFSPETGFAGVSVTP---AQFPGLHTLGMSFARADLSAAGGVNPPHYHPRATETALVLAGRVYAGFVDSGGR-LFAKVLEQGEVMVFPRAMVHFQLNVGDTPATVYGAFNSENPGIVRIPATVFGSGIREAVLER 203          
BLAST of BQ623129 vs. ExPASy Swiss-Prot
Match: GL120_ARATH (Germin-like protein subfamily 1 member 20 OS=Arabidopsis thaliana GN=GLP5A PE=1 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 1.115e-29
Identity = 74/177 (41.81%), Postives = 102/177 (57.63%), Query Frame = 3
Query:    3 AFVSSSSNAMVNDFCVA--DLKLSDSPAGYPCVPPAMVTADDFVFSGLGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSA--NTVYVKTLKKGDIMIFPQGLLHFQVNSGADGALGFVSFNSPNPGLQITDFALFANN 521
            +FV++   + + DFCVA  DLK      G  C  P  V A DF FSGL V GNT + + + VT   V Q P +N +G+SL R+D A  G  P HTHP  SEIL++V G +  GF+SS+   N ++ K L  GD+ +FP G++HFQVN G   A+ F   +S N G+      +F +N
Sbjct:   18 SFVNAYDPSPLQDFCVAIDDLK-GVFVNGRFCKDPKRVDAKDFFFSGLNVPGNTNNQVGSNVTTVNVDQIPGLNTMGISLVRIDYAPHGQNPPHTHPRGSEILVLVEGTLYVGFVSSNQDNNRLFAKVLHPGDVFVFPIGMIHFQVNVGKIPAVAFAGLSSQNAGVITIANTVFGSN 193          
BLAST of BQ623129 vs. ExPASy Swiss-Prot
Match: GL116_ARATH (Germin-like protein subfamily 1 member 16 OS=Arabidopsis thaliana GN=At5g39130 PE=2 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 1.902e-29
Identity = 73/177 (41.24%), Postives = 102/177 (57.63%), Query Frame = 3
Query:    3 AFVSSSSNAMVNDFCVA--DLKLSDSPAGYPCVPPAMVTADDFVFSGLGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSA--NTVYVKTLKKGDIMIFPQGLLHFQVNSGADGALGFVSFNSPNPGLQITDFALFANN 521
            +FV++   + + DFCVA  DLK      G  C  P  V A DF FSGL V GNT + + + VT   V Q P +N +G+SL R+D A  G  P HTHP  SEIL++V G +  GF+SS+   N ++ K L  GD+ +FP G++HFQ+N G   A+ F   +S N G+      +F +N
Sbjct:   18 SFVNAYDPSPLQDFCVAIDDLK-GVFVNGRFCKDPERVDAKDFFFSGLNVPGNTNNQVGSNVTTVNVDQIPGLNTMGISLVRIDYAPHGQNPPHTHPRGSEILVLVEGTLYVGFVSSNQDNNRLFAKVLHPGDVFVFPIGMIHFQLNIGKIPAIAFAGLSSQNAGVITIANTVFGSN 193          
The following BLAST results are available for this feature:
BLAST of BQ623129 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 89
Match NameE-valueIdentityDescription
GLT2_ARATH2.032e-3143.79Germin-like protein subfamily T member 2 OS=Arabid... [more]
GL112_ARATH4.526e-3144.13Putative germin-like protein subfamily 1 member 12... [more]
GL23_ARATH7.721e-3141.38Germin-like protein subfamily 2 member 3 OS=Arabid... [more]
GL12_ORYSJ1.008e-3042.24Germin-like protein 1-2 OS=Oryza sativa subsp. jap... [more]
GL17_ARATH1.317e-3041.44Germin-like protein subfamily 1 member 7 OS=Arabid... [more]
GL38_ORYSJ2.246e-3042.11Germin-like protein 3-8 OS=Oryza sativa subsp. jap... [more]
GL37_ORYSJ8.536e-3042.68Germin-like protein 3-7 OS=Oryza sativa subsp. jap... [more]
GL24_ORYSJ1.115e-2941.99Germin-like protein 2-4 OS=Oryza sativa subsp. jap... [more]
GL120_ARATH1.115e-2941.81Germin-like protein subfamily 1 member 20 OS=Arabi... [more]
GL116_ARATH1.902e-2941.24Germin-like protein subfamily 1 member 16 OS=Arabi... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00220 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00220 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623129 ID=BQ623129; Name=BQ623129; organism=Citrus sinensis; type=EST; length=553bp
TTGCTTTCGTATCCTCTTCCTCCAATGCTATGGTTAACGACTTCTGCGTC
GCTGACCTAAAGCTGTCGGATAGTCCCGCCGGCTATCCTTGCGTGCCCCC
CGCTATGGTTACCGCTGACGACTTCGTATTTTCGGGCCTCGGCGTGGCCG
GAAACACCACGAGCATTATCAACGCGGCAGTGACACCTGCATTTGTAGCT
CAATTTCCGGCCGTGAATGGGCTCGGACTCTCCTTGGCACGCCTAGATCT
TGCAAAGGGTGGCGTAATCCCAATCCACACTCATCCAGCTGCTTCCGAAA
TCCTTCTTGTTGTGCATGGCTGCATAACTGCCGGGTTCATTTCCTCTTCA
GCTAACACTGTTTACGTAAAGACGCTTAAGAAGGGAGATATCATGATCTT
TCCACAAGGGTTGTTGCATTTTCAAGTAAATTCCGGTGCGGACGGAGCCC
TCGGTTTTGTTAGCTTCAACAGCCCGAATCCTGGACTCCAAATCACCGAT
TTCGCCTTATTTGCTAACAACTTGTCTTCCCAATTGGTGGAGCAGACCAC
TTT
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