BQ623129

Overview
NameBQ623129
Unique NameBQ623129
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length553
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8578 contig Csv1_Contig8578:57..609. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623129 vs. ExPASy Swiss-Prot
Match: GL87_ORYSJ (Germin-like protein 8-7 OS=Oryza sativa subsp. japonica GN=GER6 PE=2 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 9.767e-26
Identity = 65/170 (38.24%), Postives = 96/170 (56.47%), Query Frame = 3
Query:   15 SSSNAMVNDFCVADLKLSDSPAGYPCVPPAMVTADDFVFSGLGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSA-NTVYVKTLKKGDIMIFPQGLLHFQVNSGA-DGALGFVSFNSPNPGLQITDFALFAN 518
            +S  + + DFCVAD        G+ C+ P  V AD F  + +      T+ + + VT   V Q P +N LG+S+AR+D A  G  P HTHP A+EIL V+ G +  GF++S+  NT++ K L KGD+ +FP+GL+HFQ N      A+   + +S NPG      A+F +
Sbjct:   23 ASDPSPLQDFCVADKHSPVLVNGFACLDPKYVNADHFFKAAMLDTPRKTNKVGSNVTLINVMQIPGLNTLGISIARIDYAPLGENPPHTHPRATEILTVLEGTLYVGFVTSNPNNTLFSKVLNKGDVFVFPEGLIHFQFNPNPHQPAVALAALSSQNPGAITIANAVFGS 192          
BLAST of BQ623129 vs. ExPASy Swiss-Prot
Match: GL86_ORYSJ (Germin-like protein 8-6 OS=Oryza sativa subsp. japonica GN=Os08g0189500 PE=2 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 1.276e-25
Identity = 66/170 (38.82%), Postives = 96/170 (56.47%), Query Frame = 3
Query:   15 SSSNAMVNDFCVADLKLSDSPAGYPCVPPAMVTADDFVFSGLGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSA-NTVYVKTLKKGDIMIFPQGLLHFQVNSGA-DGALGFVSFNSPNPGLQITDFALFAN 518
            +S  + + DFCVAD        G+ C+ P  V AD F  + +      T+ + + VT   V Q P +N LG+S+AR+D A  G  P HTHP A+EIL V+ G +  GF++S+  NT++ K LKKGD+ +FP GL+HFQ N      A+   + +S NPG      A+F +
Sbjct:   23 ASDPSPLQDFCVADEHSPVLVNGFACLDPKHVNADHFFKAAMLDTPRKTNKVGSNVTLINVMQIPGLNTLGISIARIDYAPLGQNPPHTHPRATEILTVLEGTLYVGFVTSNPNNTLFSKVLKKGDVFVFPVGLIHFQFNPNPHQPAVAIAALSSQNPGAITIANAVFGS 192          
BLAST of BQ623129 vs. ExPASy Swiss-Prot
Match: GL812_ORYSJ (Germin-like protein 8-12 OS=Oryza sativa subsp. japonica GN=Os08g0231400 PE=2 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 4.847e-25
Identity = 61/164 (37.20%), Postives = 98/164 (59.76%), Query Frame = 3
Query:   33 VNDFCVADLKLSDSPAGYPCVPPAMVTADDFVFSG-LGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSANTVYVKTLKKGDIMIFPQGLLHFQVNSGAD-GALGFVSFNSPNPGLQITDFALFAN 518
            + DFCVAD+       G+ C  P  V+++DF  +    +  NT + + + VT   V +FP +N LG+SLAR+D A  GV P H HP A+E+L V+ G +  GF++S+ N ++ K + KGD+ +FP+ ++HFQ+N   D  A+   + +S NPG+     A+F +
Sbjct:   29 LQDFCVADMNSPVRVNGFACKNPMDVSSEDFFNAAKFDMPRNTFNKLGSNVTNLNVMEFPGLNTLGISLARIDYAPMGVNPPHIHPRATELLTVLEGTLYVGFVTSNPNKLFSKVVCKGDVFVFPKAMIHFQMNLDHDKPAVAQSALSSQNPGVITIASAVFGS 192          
BLAST of BQ623129 vs. ExPASy Swiss-Prot
Match: GL14_ARATH (Germin-like protein subfamily 1 member 4 OS=Arabidopsis thaliana GN=At3g04180 PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.080e-24
Identity = 67/175 (38.29%), Postives = 95/175 (54.29%), Query Frame = 3
Query:    3 AFVSSSSNAMVNDFCVADLKLSDSPA-GYPCVPPAMVTADDFVFSGLGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSA--NTVYVKTLKKGDIMIFPQGLLHFQVNSGADGALGFVSFNSPNPGLQITDFALFAN 518
            +FV     + + D+CVA  + +     G  C  P  VT +DF  SGL V GNT     A  T   V + P +N LG+ +AR D A GG+ P HTHP  S+I LV+ G +  GF+SS+    T++ K L  GD+ +FP+GL+HF  N G   A+   +  S +PG  I   A+F +
Sbjct:   20 SFVYCYDPSPLQDYCVATNETNGVYVNGEFCKDPKRVTTNDFYTSGLNVPGNTIIGPGARNTVVDVERLPGLNTLGVDIARYDFAPGGLDPPHTHPRGSQIFLVMKGKLFVGFVSSNEYNYTLFTKVLYPGDVFVFPKGLIHFHANIGETNAVVISAGGSQDPGRIIIGDAVFGS 194          
BLAST of BQ623129 vs. ExPASy Swiss-Prot
Match: GL122_ORYSJ (Germin-like protein 12-2 OS=Oryza sativa subsp. japonica GN=Os12g0154800 PE=2 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.080e-24
Identity = 69/176 (39.20%), Postives = 97/176 (55.11%), Query Frame = 3
Query:   15 SSSNAMVNDFCVADLKLSDSPAGYPCVPPAMVTADDFVFSG-LGVAGNTT-SIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSS----ANTVYVKTLKKGDIMIFPQGLLHFQVNSGAD-GALGFVSFNSPNPGLQITDFALFANN 521
            +S  + + DFCVAD        G+PC     V  DDF  +  L    +TT S   + VT   V +   +N LG+S+AR+D A  G  P HTHP A+EIL V+ G +  GF++S+     N ++ KTL KGD+ +FPQGL+HFQ N   D  A+   + +S NPG      A+F +N
Sbjct:   22 ASDPSPLQDFCVADRNSPVHVNGFPCKDAKDVNVDDFFLAANLDKPMDTTKSKAGSNVTLINVMKLAGLNTLGISMARIDYAPKGQNPPHTHPRATEILTVLEGTLYVGFVTSNQANGENKLFTKTLNKGDVFVFPQGLIHFQFNPSYDKPAVAIAALSSQNPGAITIANAVFGSN 197          
BLAST of BQ623129 vs. ExPASy Swiss-Prot
Match: GL81_ORYSJ (Putative germin-like protein 8-1 OS=Oryza sativa subsp. japonica GN=Os08g0188900 PE=3 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 1.842e-24
Identity = 62/167 (37.13%), Postives = 97/167 (58.08%), Query Frame = 3
Query:   33 VNDFCVADLKLSDSPAGYPCVPPAMVTADDFVFSGLGVAGNTTSI--INAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSA-NTVYVKTLKKGDIMIFPQGLLHFQVN-SGADGALGFVSFNSPNPGLQITDFALFANN 521
            + DFCVADL  +    G+ C  P  V+ADDF  + +      T++  + + +T   V + P +N LG+S+ R+D A  G+ P HTHP A+EI  V+ G +  GF++S+  N ++ K L KGD+ +FP+GL+HFQ N      A+   + +S NPG+     A+F +N
Sbjct:   29 LQDFCVADLNSAVRVNGFACKNPTNVSADDFFKAAMLDKPRDTAVNKVGSNITLINVMEIPGLNTLGISIVRVDYAPLGLNPPHTHPRATEIFTVLEGTLYVGFVTSNPDNKLFSKVLNKGDVFVFPKGLIHFQFNLDPHKPAIATSAISSQNPGIITIANAVFRSN 195          
BLAST of BQ623129 vs. ExPASy Swiss-Prot
Match: GL811_ORYSJ (Germin-like protein 8-11 OS=Oryza sativa subsp. japonica GN=Os08g0190100 PE=1 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 2.406e-24
Identity = 64/170 (37.65%), Postives = 94/170 (55.29%), Query Frame = 3
Query:   15 SSSNAMVNDFCVADLKLSDSPAGYPCVPPAMVTADDFVFSGLGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSA-NTVYVKTLKKGDIMIFPQGLLHFQVNSGA-DGALGFVSFNSPNPGLQITDFALFAN 518
            +S  + + DFCVAD+       G+ C+ P  V AD F  + +      T+ + + VT   V Q P +N LG+S+AR+D A  G  P HTHP A+EIL V+ G +  GF++S+  N  + K L KGD+ +FP GL+HFQ N      A+   + +S NPG      A+F +
Sbjct:   22 ASDPSPLQDFCVADMHSPVLVNGFACLNPKDVNADHFFKAAMLDTPRKTNKVGSNVTLINVMQIPGLNTLGISIARIDYAPLGQNPPHTHPRATEILTVLEGTLYVGFVTSNPDNKFFSKVLNKGDVFVFPVGLIHFQFNPNPYKPAVAIAALSSQNPGAITIANAVFGS 191          
BLAST of BQ623129 vs. ExPASy Swiss-Prot
Match: GL121_ORYSJ (Germin-like protein 12-1 OS=Oryza sativa subsp. japonica GN=Os12g0154700 PE=2 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 3.142e-24
Identity = 68/170 (40.00%), Postives = 93/170 (54.71%), Query Frame = 3
Query:   33 VNDFCVADLKLSDSPAGYPCVPPAMVTADDFVF-SGLGVAGNTT-SIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSS----ANTVYVKTLKKGDIMIFPQGLLHFQVNSGAD-GALGFVSFNSPNPGLQITDFALFANN 521
            + DFCVAD        G+PC     V  DDF   + L    +TT S   + VT   V +   +N LG+S+AR+D A  G  P HTHP A+EIL V  G +  GF++S+     N ++ KTL KGD+ +FPQGL+HFQ N   D  A+   + +S NPG      A+F +N
Sbjct:   28 LQDFCVADRNSPVRVNGFPCKDAKDVNVDDFFLEANLDKPMDTTKSKAGSNVTLINVMKLTGLNTLGISMARIDYAPKGQNPPHTHPRATEILTVFEGTLYVGFVTSNQANGENKLFTKTLNKGDVFVFPQGLIHFQFNPSYDKPAVAIAALSSQNPGAITIANAVFGSN 197          
BLAST of BQ623129 vs. ExPASy Swiss-Prot
Match: GL123_ORYSJ (Putative germin-like protein 12-3 OS=Oryza sativa subsp. japonica GN=Os12g0154900 PE=3 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 9.141e-24
Identity = 66/183 (36.07%), Postives = 96/183 (52.46%), Query Frame = 3
Query:   15 SSSNAMVNDFCVADLKLSDSPAGYPCVPPAMVTADDFVFSG---------LGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSS----ANTVYVKTLKKGDIMIFPQGLLHFQVNSGAD-GALGFVSFNSPNPGLQITDFALFANN 521
            +S  + + D CVAD        G+PC     V+ DDF  +             AG+  ++IN       V +   +N LG+S+AR+D A  G  P HTHP A+EIL V+ G +  GF++S+     N ++ KTL KGD+ +FP+GL+HFQ N   D  A   V+ +S NPG      A+F +N
Sbjct:   22 ASDPSPLQDLCVADKNSPVRVNGFPCKDAKDVSVDDFFLAANLDKPMDITKSKAGSNVTLIN-------VMKLAGLNTLGISMARIDYAPKGQNPPHTHPRATEILSVIEGSLYVGFVTSNQANGENKLFTKTLNKGDVFVFPEGLIHFQFNPSYDKPAAAIVALSSQNPGAITIANAVFGSN 197          
BLAST of BQ623129 vs. ExPASy Swiss-Prot
Match: GL124_ORYSJ (Putative germin-like protein 12-4 OS=Oryza sativa subsp. japonica GN=Os12g0155000 PE=3 SV=2)

HSP 1 Score: 107.071 bits (266), Expect = 5.925e-23
Identity = 67/176 (38.07%), Postives = 96/176 (54.55%), Query Frame = 3
Query:   15 SSSNAMVNDFCVADLKLSDSPAGYPCVPPAMVTADDFVFSG-LGVAGNTT-SIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSS----ANTVYVKTLKKGDIMIFPQGLLHFQVNSGAD-GALGFVSFNSPNPGLQITDFALFANN 521
            +S  + + DFCVAD        G PC     V+ DDF  +  L    +TT S   + VT   V +   +N L +S+AR+D A  G  P HTHP A+EIL V+ G +  GF++S+     N ++ KTL KGD+ +FPQGL+HFQ N   D  A+   + +S NPG      A+F ++
Sbjct:   22 ASDPSPLQDFCVADKHSPVRVNGLPCKDAKDVSVDDFFLAANLDKPMDTTKSKAGSNVTLINVMKLAGLNTLSISMARIDYAPKGQNPPHTHPRATEILTVLEGSLYVGFVTSNQANRENKLFTKTLNKGDVFVFPQGLIHFQFNPSYDKPAVAIAALSSQNPGAITIANAVFGSH 197          
The following BLAST results are available for this feature:
BLAST of BQ623129 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 89
Match NameE-valueIdentityDescription
GL87_ORYSJ9.767e-2638.24Germin-like protein 8-7 OS=Oryza sativa subsp. jap... [more]
GL86_ORYSJ1.276e-2538.82Germin-like protein 8-6 OS=Oryza sativa subsp. jap... [more]
GL812_ORYSJ4.847e-2537.20Germin-like protein 8-12 OS=Oryza sativa subsp. ja... [more]
GL14_ARATH1.080e-2438.29Germin-like protein subfamily 1 member 4 OS=Arabid... [more]
GL122_ORYSJ1.080e-2439.20Germin-like protein 12-2 OS=Oryza sativa subsp. ja... [more]
GL81_ORYSJ1.842e-2437.13Putative germin-like protein 8-1 OS=Oryza sativa s... [more]
GL811_ORYSJ2.406e-2437.65Germin-like protein 8-11 OS=Oryza sativa subsp. ja... [more]
GL121_ORYSJ3.142e-2440.00Germin-like protein 12-1 OS=Oryza sativa subsp. ja... [more]
GL123_ORYSJ9.141e-2436.07Putative germin-like protein 12-3 OS=Oryza sativa ... [more]
GL124_ORYSJ5.925e-2338.07Putative germin-like protein 12-4 OS=Oryza sativa ... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00220 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00220 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623129 ID=BQ623129; Name=BQ623129; organism=Citrus sinensis; type=EST; length=553bp
TTGCTTTCGTATCCTCTTCCTCCAATGCTATGGTTAACGACTTCTGCGTC
GCTGACCTAAAGCTGTCGGATAGTCCCGCCGGCTATCCTTGCGTGCCCCC
CGCTATGGTTACCGCTGACGACTTCGTATTTTCGGGCCTCGGCGTGGCCG
GAAACACCACGAGCATTATCAACGCGGCAGTGACACCTGCATTTGTAGCT
CAATTTCCGGCCGTGAATGGGCTCGGACTCTCCTTGGCACGCCTAGATCT
TGCAAAGGGTGGCGTAATCCCAATCCACACTCATCCAGCTGCTTCCGAAA
TCCTTCTTGTTGTGCATGGCTGCATAACTGCCGGGTTCATTTCCTCTTCA
GCTAACACTGTTTACGTAAAGACGCTTAAGAAGGGAGATATCATGATCTT
TCCACAAGGGTTGTTGCATTTTCAAGTAAATTCCGGTGCGGACGGAGCCC
TCGGTTTTGTTAGCTTCAACAGCCCGAATCCTGGACTCCAAATCACCGAT
TTCGCCTTATTTGCTAACAACTTGTCTTCCCAATTGGTGGAGCAGACCAC
TTT
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