BQ623138
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of BQ623138 vs. ExPASy Swiss-Prot
Match: RS7_METJA (30S ribosomal protein S7P OS=Methanocaldococcus jannaschii GN=rps7p PE=3 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 6.874e-26 Identity = 59/112 (52.68%), Postives = 78/112 (69.64%), Query Frame = 2 Query: 134 DVKLFNRWTFEDVQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDAT 469 ++K+F RW+ +DV V D L +YI + YVPHTAGRY+ ++F KA+ IVERL N +M N GKKL A++IV++A EII T QNPIQV+VDA+ N+GPRED T Sbjct: 5 EIKVFGRWSTKDVVVKDPGLRNYINLTPI----YVPHTAGRYTKRQFEKAKMNIVERLVNKVMRREENTGKKLKALKIVENAFEIIEKRTKQNPIQVLVDAIENAGPREDTT 112
BLAST of BQ623138 vs. ExPASy Swiss-Prot
Match: RS7_DESK1 (30S ribosomal protein S7P OS=Desulfurococcus kamchatkensis (strain 1221n / DSM 18924) GN=rps7p PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 8.952e-26 Identity = 54/112 (48.21%), Postives = 79/112 (70.54%), Query Frame = 2 Query: 134 DVKLFNRWTFEDVQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDAT 469 ++KLFN+W+++ ++V D SL YI ++ Y+PH+ GR+ KRF KA PIVERL N++M GRN GKK +A IVK + E+I+L T +NP+QV+V A+ N+ PRE+ T Sbjct: 13 EIKLFNKWSYDFIEVRDPSLKKYICLKPV----YLPHSGGRHEHKRFGKALVPIVERLINNVMRPGRNMGKKHLAYNIVKKSFELIYLKTGENPLQVLVRAIENAAPREETT 120 HSP 2 Score: 25.7942 bits (55), Expect = 8.952e-26 Identity = 12/22 (54.55%), Postives = 16/22 (72.73%), Query Frame = 1 Query: 517 SPLRRVNQAIYLLTTGARESAF 582 +PLRR++ A+ LT GAR AF Sbjct: 136 APLRRIDLALRHLTEGARLKAF 157
BLAST of BQ623138 vs. ExPASy Swiss-Prot
Match: RS7_SULTO (30S ribosomal protein S7P OS=Sulfolobus tokodaii GN=rps7p PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 3.346e-25 Identity = 58/112 (51.79%), Postives = 77/112 (68.75%), Query Frame = 2 Query: 134 DVKLFNRWTFEDVQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDAT 469 D+K+F +W + V++ D SL YIG+ Y+PHT GR+ +RF KA+ PIVERL N++M GRN GKK++A IVK A +II L T QNPIQV+V A+ NS PRE+ T Sbjct: 10 DLKVFGKWDTK-VEIRDPSLKKYIGLMPV----YLPHTGGRHEHRRFGKAKLPIVERLINNVMRPGRNKGKKMLAYNIVKTAFDIIALKTGQNPIQVLVKAIENSAPREEVT 116 HSP 2 Score: 23.483 bits (49), Expect = 3.346e-25 Identity = 10/23 (43.48%), Postives = 17/23 (73.91%), Query Frame = 1 Query: 517 SPLRRVNQAIYLLTTGARESAFS 585 +P RRV+ A+ L GA+E++F+ Sbjct: 132 APQRRVDLALRHLVMGAKEASFN 154
BLAST of BQ623138 vs. ExPASy Swiss-Prot
Match: RS7_SULSO (30S ribosomal protein S7P OS=Sulfolobus solfataricus GN=rps7p PE=3 SV=3) HSP 1 Score: 108.997 bits (271), Expect = 9.601e-25 Identity = 57/112 (50.89%), Postives = 75/112 (66.96%), Query Frame = 2 Query: 134 DVKLFNRWTFEDVQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDAT 469 D+K+F +W + V++ D SL YI + Y+PHT GR+ +RF KA+ PIVERL N +M GRN GKK +A IVK A +II+L T QNPIQV+V A+ NS PRE+ T Sbjct: 9 DIKVFGKWDTK-VEIRDPSLKKYISLMPV----YLPHTGGRHEHRRFGKAKVPIVERLINQIMRPGRNKGKKHLAYNIVKLAFDIIYLKTGQNPIQVLVRAIENSAPREEVT 115 HSP 2 Score: 24.6386 bits (52), Expect = 9.601e-25 Identity = 9/23 (39.13%), Postives = 18/23 (78.26%), Query Frame = 1 Query: 517 SPLRRVNQAIYLLTTGARESAFS 585 SP RR++ A+ + TGA++++F+ Sbjct: 131 SPQRRIDLALRHIATGAKDASFN 153
BLAST of BQ623138 vs. ExPASy Swiss-Prot
Match: RS7_PYRIL (30S ribosomal protein S7P OS=Pyrobaculum islandicum (strain DSM 4184 / JCM 9189) GN=rps7p PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 8.402e-24 Identity = 59/111 (53.15%), Postives = 72/111 (64.86%), Query Frame = 2 Query: 137 VKLFNRWTFEDVQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDAT 469 V LF +W+FE+V V D L YI ++ +PHT GRY RF KA+ PIVERL N +M GRN GKK A IVK A +II+ T QNPIQV+VDA+IN PRE+ T Sbjct: 40 VLLFGKWSFENVVVKDPGLRRYICLKPV----LLPHTEGRYQKHRFGKARIPIVERLINLMMRPGRNTGKKHKAYNIVKRAFDIIYYKTGQNPIQVLVDAIINVAPREEVT 146
BLAST of BQ623138 vs. ExPASy Swiss-Prot
Match: RS7_METKA (30S ribosomal protein S7P OS=Methanopyrus kandleri GN=rps7p PE=3 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 1.097e-23 Identity = 55/113 (48.67%), Postives = 76/113 (67.26%), Query Frame = 2 Query: 131 YDVKLFNRWTFEDVQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDAT 469 Y++K+F +W +V+V D L DYI ++ Y+PHT GR++ KRF KA+ PIVERL N +M +N GKK +A IVK A +IIH T +NPIQV+V A+ N+ PRE+ T Sbjct: 11 YEMKVFGKWDPTEVEVRDPGLKDYICLKPM----YLPHTGGRHAKKRFAKAEVPIVERLINRVMRTEKNTGKKHLAYNIVKRAFDIIHERTGENPIQVLVQALENAAPREETT 119
BLAST of BQ623138 vs. ExPASy Swiss-Prot
Match: RS7_SULAC (30S ribosomal protein S7P OS=Sulfolobus acidocaldarius GN=rps7p PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 1.741e-23 Identity = 55/112 (49.11%), Postives = 76/112 (67.86%), Query Frame = 2 Query: 134 DVKLFNRWTFEDVQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDAT 469 +VK+F +W + V+V D SL YI + + Y+PHT GR+ +RF K++ PIVERL N+LM GRN GKK++A IVK +II + T QNPIQV+V A+ N+ PRE+ T Sbjct: 11 NVKVFGKWDTK-VEVRDPSLKKYIDLMSI----YLPHTGGRHEHRRFGKSRIPIVERLINNLMRPGRNKGKKMLAYNIVKTTFDIIAVKTGQNPIQVLVRAIENAAPREEVT 117 HSP 2 Score: 24.6386 bits (52), Expect = 1.741e-23 Identity = 11/23 (47.83%), Postives = 17/23 (73.91%), Query Frame = 1 Query: 517 SPLRRVNQAIYLLTTGARESAFS 585 +P RRV+ A+ L TGA E++F+ Sbjct: 133 APQRRVDLALRHLVTGASEASFN 155
BLAST of BQ623138 vs. ExPASy Swiss-Prot
Match: RS5_ENCCU (40S ribosomal protein S5 OS=Encephalitozoon cuniculi GN=RPS5 PE=1 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 2.942e-23 Identity = 51/110 (46.36%), Postives = 74/110 (67.27%), Query Frame = 2 Query: 134 DVKLFNRWTFEDVQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPRED 463 ++ LF ++++E+V+VN++SL YI + VPH A + KA+ PI ER SLM HGRN+GKK +A+ I + A IIH +T +NP+QV+VDA++NSGPRED Sbjct: 22 EINLFEKYSYEEVKVNNVSLRPYINLS---RRGIVPHAATTITKGTTGKARIPIAERFVCSLMRHGRNSGKKRLAINIFEDACFIIHSMTKKNPLQVLVDAIVNSGPRED 128 HSP 2 Score: 25.0238 bits (53), Expect = 2.942e-23 Identity = 10/18 (55.56%), Postives = 14/18 (77.78%), Query Frame = 3 Query: 471 RIGSAGVVRRQAVDIFPI 524 RIG AG +RR +VD+ P+ Sbjct: 131 RIGRAGSMRRTSVDVSPL 148
BLAST of BQ623138 vs. ExPASy Swiss-Prot
Match: RS7_THENV (30S ribosomal protein S7P OS=Thermoproteus neutrophilus (strain DSM 2338 / JCM 9278 / V24Sta) GN=rps7p PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 9.290e-23 Identity = 55/109 (50.46%), Postives = 71/109 (65.14%), Query Frame = 2 Query: 143 LFNRWTFEDVQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDAT 469 LF +W+FE+V V D L YI ++ +PHT GRY RF KA+ PIVERL N +M GRN GKK A IVK A +I++ T QNPIQV +DA++N+ PRE+ T Sbjct: 42 LFGKWSFENVVVRDPGLRRYICLKPV----VLPHTEGRYQNYRFGKARIPIVERLINLMMRPGRNAGKKHKAYNIVKRAFDIVYYKTGQNPIQVFIDAIVNTAPREEIT 146
BLAST of BQ623138 vs. ExPASy Swiss-Prot
Match: RS7_PYRAE (30S ribosomal protein S7P OS=Pyrobaculum aerophilum GN=rps7p PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 9.290e-23 Identity = 54/111 (48.65%), Postives = 72/111 (64.86%), Query Frame = 2 Query: 137 VKLFNRWTFEDVQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDAT 469 + LF +W++EDV V D L YI ++ +PHT GRY RF KA+ PIVERL N +M GRN GKK A IVK A ++I+ T +NP+QV +DA+IN+ PRE+ T Sbjct: 39 ILLFGKWSYEDVVVRDPGLRRYICLKPV----ILPHTEGRYQNTRFGKARIPIVERLINLMMRPGRNTGKKHKAYNIVKRAFDLIYYKTGKNPLQVFIDAIINTAPREEIT 145 The following BLAST results are available for this feature:
BLAST of BQ623138 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 66
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Sequences
The
following sequences are available for this feature:
EST sequence >BQ623138 ID=BQ623138; Name=BQ623138; organism=Citrus sinensis; type=EST; length=598bpback to top |