BQ623139

Overview
NameBQ623139
Unique NameBQ623139
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length487
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6745 contig Csv1_Contig6745:1927..2417. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623139 vs. ExPASy Swiss-Prot
Match: ALF_PLAF7 (Fructose-bisphosphate aldolase OS=Plasmodium falciparum (isolate 3D7) GN=PF14_0425 PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 4.499e-12
Identity = 38/67 (56.72%), Postives = 44/67 (65.67%), Query Frame = 3
Query:    3 LSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 203
            L+FS+GRALQ S L  W GK+ENV KA+   L R +ANS AT G YKG A  GE A  SL+ K Y Y
Sbjct:  304 LTFSYGRALQASVLNTWQGKKENVAKAREVLLQRAEANSLATYGKYKGGAG-GENAGASLYEKKYVY 369          
BLAST of BQ623139 vs. ExPASy Swiss-Prot
Match: ALFC1_ARATH (Probable fructose-bisphosphate aldolase 1, chloroplastic OS=Arabidopsis thaliana GN=FBA1 PE=1 SV=2)

HSP 1 Score: 68.9366 bits (167), Expect = 1.309e-11
Identity = 36/67 (53.73%), Postives = 43/67 (64.18%), Query Frame = 3
Query:    3 LSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 203
            +SFS+ RALQ + LK W GKEENV+ AQ   L R KANS A LG Y G+ +  E A E + VK Y Y
Sbjct:  334 VSFSYARALQNTCLKTWGGKEENVKAAQDILLARAKANSLAQLGKYTGEGE-SEEAKEGMFVKGYTY 399          
BLAST of BQ623139 vs. ExPASy Swiss-Prot
Match: ALF1_CAEEL (Fructose-bisphosphate aldolase 1 OS=Caenorhabditis elegans GN=aldo-1 PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 2.233e-11
Identity = 33/67 (49.25%), Postives = 44/67 (65.67%), Query Frame = 3
Query:    3 LSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 203
            L+FS+GRALQ S L  WAGK+EN+  AQ   L R + NS A++G Y GDA     A++SL V ++ Y
Sbjct:  300 LTFSYGRALQASCLAKWAGKDENIAAAQEVLLHRAQVNSLASVGKYTGDASADAAASQSLFVANHSY 366          
BLAST of BQ623139 vs. ExPASy Swiss-Prot
Match: ALDOA_PONAB (Fructose-bisphosphate aldolase A OS=Pongo abelii GN=ALDOA PE=2 SV=3)

HSP 1 Score: 68.1662 bits (165), Expect = 2.233e-11
Identity = 34/67 (50.75%), Postives = 44/67 (65.67%), Query Frame = 3
Query:    3 LSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 203
            L+FS+GRALQ S LKAW GK+EN++ AQ  ++ R  ANS A  G Y    Q G  A+ESL V ++ Y
Sbjct:  298 LTFSYGRALQASALKAWGGKKENLKAAQEEYVKRALANSLACQGKYTPSGQAGAAASESLFVSNHAY 364          
BLAST of BQ623139 vs. ExPASy Swiss-Prot
Match: ALDOA_PANTR (Fructose-bisphosphate aldolase A OS=Pan troglodytes GN=ALDOA PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 2.233e-11
Identity = 34/67 (50.75%), Postives = 44/67 (65.67%), Query Frame = 3
Query:    3 LSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 203
            L+FS+GRALQ S LKAW GK+EN++ AQ  ++ R  ANS A  G Y    Q G  A+ESL V ++ Y
Sbjct:  298 LTFSYGRALQASALKAWGGKKENLKAAQEEYVKRALANSLACQGKYTPSGQAGAAASESLFVSNHAY 364          
BLAST of BQ623139 vs. ExPASy Swiss-Prot
Match: ALDOA_HUMAN (Fructose-bisphosphate aldolase A OS=Homo sapiens GN=ALDOA PE=1 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 2.233e-11
Identity = 34/67 (50.75%), Postives = 44/67 (65.67%), Query Frame = 3
Query:    3 LSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 203
            L+FS+GRALQ S LKAW GK+EN++ AQ  ++ R  ANS A  G Y    Q G  A+ESL V ++ Y
Sbjct:  298 LTFSYGRALQASALKAWGGKKENLKAAQEEYVKRALANSLACQGKYTPSGQAGAAASESLFVSNHAY 364          
BLAST of BQ623139 vs. ExPASy Swiss-Prot
Match: ALF2_PLABA (Fructose-bisphosphate aldolase 2 OS=Plasmodium berghei (strain Anka) GN=ALDO2 PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 2.916e-11
Identity = 37/67 (55.22%), Postives = 43/67 (64.18%), Query Frame = 3
Query:    3 LSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 203
            L+FS+GRALQ S L  W GK+ENV KA+   L R +ANS AT G YKG A  G  A  SL+ K Y Y
Sbjct:  293 LTFSYGRALQASVLNTWQGKKENVAKARRVLLQRAEANSLATYGKYKGGAG-GSTAGASLYEKKYVY 358          
BLAST of BQ623139 vs. ExPASy Swiss-Prot
Match: ALDOA_RAT (Fructose-bisphosphate aldolase A OS=Rattus norvegicus GN=Aldoa PE=1 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 2.916e-11
Identity = 33/67 (49.25%), Postives = 44/67 (65.67%), Query Frame = 3
Query:    3 LSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 203
            L+FS+GRALQ S LKAW GK+EN++ AQ  ++ R  ANS A  G Y    Q G  A+ESL + ++ Y
Sbjct:  298 LTFSYGRALQASALKAWGGKKENLKAAQEEYIKRALANSLACQGKYTPSGQSGAAASESLFISNHAY 364          
BLAST of BQ623139 vs. ExPASy Swiss-Prot
Match: ALDOA_RABIT (Fructose-bisphosphate aldolase A OS=Oryctolagus cuniculus GN=ALDOA PE=1 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 2.916e-11
Identity = 33/67 (49.25%), Postives = 44/67 (65.67%), Query Frame = 3
Query:    3 LSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 203
            L+FS+GRALQ S LKAW GK+EN++ AQ  ++ R  ANS A  G Y    Q G  A+ESL + ++ Y
Sbjct:  298 LTFSYGRALQASALKAWGGKKENLKAAQEEYVKRALANSLACQGKYTPSGQAGAAASESLFISNHAY 364          
BLAST of BQ623139 vs. ExPASy Swiss-Prot
Match: ALDOA_MOUSE (Fructose-bisphosphate aldolase A OS=Mus musculus GN=Aldoa PE=1 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 2.916e-11
Identity = 33/67 (49.25%), Postives = 44/67 (65.67%), Query Frame = 3
Query:    3 LSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 203
            L+FS+GRALQ S LKAW GK+EN++ AQ  ++ R  ANS A  G Y    Q G  A+ESL + ++ Y
Sbjct:  298 LTFSYGRALQASALKAWGGKKENLKAAQEEYIKRALANSLACQGKYTPSGQSGAAASESLFISNHAY 364          
The following BLAST results are available for this feature:
BLAST of BQ623139 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 22
Match NameE-valueIdentityDescription
ALF_PLAF74.499e-1256.72Fructose-bisphosphate aldolase OS=Plasmodium falci... [more]
ALFC1_ARATH1.309e-1153.73Probable fructose-bisphosphate aldolase 1, chlorop... [more]
ALF1_CAEEL2.233e-1149.25Fructose-bisphosphate aldolase 1 OS=Caenorhabditis... [more]
ALDOA_PONAB2.233e-1150.75Fructose-bisphosphate aldolase A OS=Pongo abelii G... [more]
ALDOA_PANTR2.233e-1150.75Fructose-bisphosphate aldolase A OS=Pan troglodyte... [more]
ALDOA_HUMAN2.233e-1150.75Fructose-bisphosphate aldolase A OS=Homo sapiens G... [more]
ALF2_PLABA2.916e-1155.22Fructose-bisphosphate aldolase 2 OS=Plasmodium ber... [more]
ALDOA_RAT2.916e-1149.25Fructose-bisphosphate aldolase A OS=Rattus norvegi... [more]
ALDOA_RABIT2.916e-1149.25Fructose-bisphosphate aldolase A OS=Oryctolagus cu... [more]
ALDOA_MOUSE2.916e-1149.25Fructose-bisphosphate aldolase A OS=Mus musculus G... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00230 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00230 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623139 ID=BQ623139; Name=BQ623139; organism=Citrus sinensis; type=EST; length=487bp
CACTTTCCTTTTCCTTTGGACGTGCACTTCAGCAGAGCACTCTCAAGGCA
TGGGCTGGAAAGGAAGAGAATGTGCAGAAGGCCCAGGCTGCTTTCCTTGT
CAGGTGCAAGGCCAACTCTGAGGCTACCCTCGGTACTTACAAGGGCGATG
CCCAGCTTGGTGAAGGTGCCGCAGAGTCTCTCCATGTCAAGGACTACAAA
TACTAAGCACAGTTGAAGCTTTGGGTGTTGTGCTTTATGAACTTTATGAG
AGTAAATGGCGGTATGAACATTAGGTTGGCACATTCTCATTCATAGTTTT
AGGGCTTTTTCATATTAGGTGGAGCAATAAAAAGCTTGGGAACTTCGGTT
TGAGTGGTTTTGATCAAAACTAAACTGAAAACTGTTTATGCTTTTGTTTT
TGTTTTTTTTTTCCTTTTCCCCTAATGGCGCTAAATTTCTGTGATTTTGT
CACATAATTGATAATGTTTTCTTGTGCTAAAAAAAAA
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