BQ623139

Overview
NameBQ623139
Unique NameBQ623139
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length487
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of BQ623139 vs. ExPASy Swiss-Prot
Match: ALFC_ORYSJ (Fructose-bisphosphate aldolase, chloroplastic OS=Oryza sativa subsp. japonica GN=Os11g0171300 PE=1 SV=2)

HSP 1 Score: 67.3958 bits (163), Expect = 3.809e-11
Identity = 35/67 (52.24%), Postives = 44/67 (65.67%), Query Frame = 3 
Query:    3 LSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 203
            +SFS+ RALQ + LK W G+ ENV+ AQ A L+R KANS A LG Y  D +  E A E + VK+Y Y
Sbjct:  323 VSFSYARALQNTCLKTWGGQPENVKAAQDALLLRAKANSLAQLGKYTSDGEAAE-AKEGMFVKNYVY 388
[Close]
BLAST of BQ623139 vs. ExPASy Swiss-Prot
Match: ALFC2_ARATH (Probable fructose-bisphosphate aldolase 2, chloroplastic OS=Arabidopsis thaliana GN=FBA2 PE=1 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 8.485e-11
Identity = 34/67 (50.75%), Postives = 41/67 (61.19%), Query Frame = 3 
Query:    3 LSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 203
            +SFS+ RALQ + LK W G+ ENV  AQ   L R KANS A LG Y G+ +  E A E + VK Y Y
Sbjct:  333 VSFSYARALQNTCLKTWGGRPENVNAAQTTLLARAKANSLAQLGKYTGEGE-SEEAKEGMFVKGYTY 398
The following BLAST results are available for this feature:
BLAST of BQ623139 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 22
Match NameE-valueIdentityDescription
ALFC_ORYSJ3.809e-1152.24Fructose-bisphosphate aldolase, chloroplastic OS=O... [more]
ALFC2_ARATH8.485e-1150.75Probable fructose-bisphosphate aldolase 2, chlorop... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00230 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00230 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623139 ID=BQ623139; Name=BQ623139; organism=Citrus sinensis; type=EST; length=487bp
CACTTTCCTTTTCCTTTGGACGTGCACTTCAGCAGAGCACTCTCAAGGCA
TGGGCTGGAAAGGAAGAGAATGTGCAGAAGGCCCAGGCTGCTTTCCTTGT
CAGGTGCAAGGCCAACTCTGAGGCTACCCTCGGTACTTACAAGGGCGATG
CCCAGCTTGGTGAAGGTGCCGCAGAGTCTCTCCATGTCAAGGACTACAAA
TACTAAGCACAGTTGAAGCTTTGGGTGTTGTGCTTTATGAACTTTATGAG
AGTAAATGGCGGTATGAACATTAGGTTGGCACATTCTCATTCATAGTTTT
AGGGCTTTTTCATATTAGGTGGAGCAATAAAAAGCTTGGGAACTTCGGTT
TGAGTGGTTTTGATCAAAACTAAACTGAAAACTGTTTATGCTTTTGTTTT
TGTTTTTTTTTTCCTTTTCCCCTAATGGCGCTAAATTTCTGTGATTTTGT
CACATAATTGATAATGTTTTCTTGTGCTAAAAAAAAA
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