BQ623140

Overview
NameBQ623140
Unique NameBQ623140
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length611
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10009 contig Csv1_Contig10009:956..1565. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623140 vs. ExPASy Swiss-Prot
Match: URK_SALNS (Uridine kinase OS=Salmonella newport (strain SL254) GN=udk PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.007e-11
Identity = 31/83 (37.35%), Postives = 58/83 (69.88%), Query Frame = 3
Query:   39 IKPPKILVIEGLHPMYDARVRELLDFSIYLDISNEVKFAWKIQRDMTERGHSLESIKASIEAR-KPDFDAYIDPQKQYADAVI 284
            ++P K++++EG+  + DAR+RE ++FSI++D   ++    +I+RD+ ERG S++S+ A  +   +P F  +I+P KQYAD ++
Sbjct:  109 VEPKKVIILEGILLLTDARLREEMNFSIFVDTPLDICLMRRIKRDVNERGRSMDSVMAQYQKTVRPMFLQFIEPSKQYADIIV 191          
BLAST of BQ623140 vs. ExPASy Swiss-Prot
Match: URK_SALHS (Uridine kinase OS=Salmonella heidelberg (strain SL476) GN=udk PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.007e-11
Identity = 31/83 (37.35%), Postives = 58/83 (69.88%), Query Frame = 3
Query:   39 IKPPKILVIEGLHPMYDARVRELLDFSIYLDISNEVKFAWKIQRDMTERGHSLESIKASIEAR-KPDFDAYIDPQKQYADAVI 284
            ++P K++++EG+  + DAR+RE ++FSI++D   ++    +I+RD+ ERG S++S+ A  +   +P F  +I+P KQYAD ++
Sbjct:  109 VEPKKVIILEGILLLTDARLREEMNFSIFVDTPLDICLMRRIKRDVNERGRSMDSVMAQYQKTVRPMFLQFIEPSKQYADIIV 191          
BLAST of BQ623140 vs. ExPASy Swiss-Prot
Match: URK_SALG2 (Uridine kinase OS=Salmonella gallinarum (strain 287/91 / NCTC 13346) GN=udk PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.007e-11
Identity = 31/83 (37.35%), Postives = 58/83 (69.88%), Query Frame = 3
Query:   39 IKPPKILVIEGLHPMYDARVRELLDFSIYLDISNEVKFAWKIQRDMTERGHSLESIKASIEAR-KPDFDAYIDPQKQYADAVI 284
            ++P K++++EG+  + DAR+RE ++FSI++D   ++    +I+RD+ ERG S++S+ A  +   +P F  +I+P KQYAD ++
Sbjct:  109 VEPKKVIILEGILLLTDARLREEMNFSIFVDTPLDICLMRRIKRDVNERGRSMDSVMAQYQKTVRPMFLQFIEPSKQYADIIV 191          
BLAST of BQ623140 vs. ExPASy Swiss-Prot
Match: URK_SALEP (Uridine kinase OS=Salmonella enteritidis PT4 (strain P125109) GN=udk PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.007e-11
Identity = 31/83 (37.35%), Postives = 58/83 (69.88%), Query Frame = 3
Query:   39 IKPPKILVIEGLHPMYDARVRELLDFSIYLDISNEVKFAWKIQRDMTERGHSLESIKASIEAR-KPDFDAYIDPQKQYADAVI 284
            ++P K++++EG+  + DAR+RE ++FSI++D   ++    +I+RD+ ERG S++S+ A  +   +P F  +I+P KQYAD ++
Sbjct:  109 VEPKKVIILEGILLLTDARLREEMNFSIFVDTPLDICLMRRIKRDVNERGRSMDSVMAQYQKTVRPMFLQFIEPSKQYADIIV 191          
BLAST of BQ623140 vs. ExPASy Swiss-Prot
Match: URK_SALDC (Uridine kinase OS=Salmonella dublin (strain CT_02021853) GN=udk PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.007e-11
Identity = 31/83 (37.35%), Postives = 58/83 (69.88%), Query Frame = 3
Query:   39 IKPPKILVIEGLHPMYDARVRELLDFSIYLDISNEVKFAWKIQRDMTERGHSLESIKASIEAR-KPDFDAYIDPQKQYADAVI 284
            ++P K++++EG+  + DAR+RE ++FSI++D   ++    +I+RD+ ERG S++S+ A  +   +P F  +I+P KQYAD ++
Sbjct:  109 VEPKKVIILEGILLLTDARLREEMNFSIFVDTPLDICLMRRIKRDVNERGRSMDSVMAQYQKTVRPMFLQFIEPSKQYADIIV 191          
BLAST of BQ623140 vs. ExPASy Swiss-Prot
Match: URK_SALCH (Uridine kinase OS=Salmonella choleraesuis GN=udk PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.007e-11
Identity = 31/83 (37.35%), Postives = 58/83 (69.88%), Query Frame = 3
Query:   39 IKPPKILVIEGLHPMYDARVRELLDFSIYLDISNEVKFAWKIQRDMTERGHSLESIKASIEAR-KPDFDAYIDPQKQYADAVI 284
            ++P K++++EG+  + DAR+RE ++FSI++D   ++    +I+RD+ ERG S++S+ A  +   +P F  +I+P KQYAD ++
Sbjct:  109 VEPKKVIILEGILLLTDARLREEMNFSIFVDTPLDICLMRRIKRDVNERGRSMDSVMAQYQKTVRPMFLQFIEPSKQYADIIV 191          
BLAST of BQ623140 vs. ExPASy Swiss-Prot
Match: URK_SALA4 (Uridine kinase OS=Salmonella agona (strain SL483) GN=udk PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.007e-11
Identity = 31/83 (37.35%), Postives = 58/83 (69.88%), Query Frame = 3
Query:   39 IKPPKILVIEGLHPMYDARVRELLDFSIYLDISNEVKFAWKIQRDMTERGHSLESIKASIEAR-KPDFDAYIDPQKQYADAVI 284
            ++P K++++EG+  + DAR+RE ++FSI++D   ++    +I+RD+ ERG S++S+ A  +   +P F  +I+P KQYAD ++
Sbjct:  109 VEPKKVIILEGILLLTDARLREEMNFSIFVDTPLDICLMRRIKRDVNERGRSMDSVMAQYQKTVRPMFLQFIEPSKQYADIIV 191          
BLAST of BQ623140 vs. ExPASy Swiss-Prot
Match: URK_LACLS (Uridine kinase OS=Lactococcus lactis subsp. cremoris (strain SK11) GN=udk PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.007e-11
Identity = 32/82 (39.02%), Postives = 57/82 (69.51%), Query Frame = 3
Query:   42 KPPKILVIEGLHPMYDARVRELLDFSIYLDISNEVKFAWKIQRDMTERGHSLES-IKASIEARKPDFDAYIDPQKQYADAVI 284
            +P  +L++EG+  + D R+R+L+D  I++D  ++V+   +I+RD+ ERG +L+S I   +EA KP +  +I+P K+YAD +I
Sbjct:  102 EPVDVLIVEGILVLEDERLRDLMDIKIFVDTDDDVRIIRRIRRDIEERGRTLDSVITQYLEAVKPMYHQFIEPTKRYADVII 183          
BLAST of BQ623140 vs. ExPASy Swiss-Prot
Match: URK_LACLM (Uridine kinase OS=Lactococcus lactis subsp. cremoris (strain MG1363) GN=udk PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.007e-11
Identity = 32/82 (39.02%), Postives = 57/82 (69.51%), Query Frame = 3
Query:   42 KPPKILVIEGLHPMYDARVRELLDFSIYLDISNEVKFAWKIQRDMTERGHSLES-IKASIEARKPDFDAYIDPQKQYADAVI 284
            +P  +L++EG+  + D R+R+L+D  I++D  ++V+   +I+RD+ ERG +L+S I   +EA KP +  +I+P K+YAD +I
Sbjct:  102 EPVDVLIVEGILVLEDERLRDLMDIKIFVDTDDDVRIIRRIRRDIEERGRTLDSVITQYLEAVKPMYHQFIEPTKRYADVII 183          
BLAST of BQ623140 vs. ExPASy Swiss-Prot
Match: URK_HAEIN (Uridine kinase OS=Haemophilus influenzae GN=udk PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.007e-11
Identity = 35/81 (43.21%), Postives = 54/81 (66.67%), Query Frame = 3
Query:   45 PPKILVIEGLHPMYDARVRELLDFSIYLDISNEVKFAWKIQRDMTERGHSLESIKASIEAR-KPDFDAYIDPQKQYADAVI 284
            P +I+++EG+  + D RVR+L D S+++D   ++ F  ++QRDM ERG SL+S+     A  +P F  +I+P KQYAD VI
Sbjct:  109 PKRIVILEGILLLTDERVRQLADISVFVDTPLDICFIRRLQRDMEERGRSLQSVIDQYRATVRPMFLQFIEPSKQYADIVI 189          
The following BLAST results are available for this feature:
BLAST of BQ623140 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 63
Match NameE-valueIdentityDescription
URK_SALNS1.007e-1137.35Uridine kinase OS=Salmonella newport (strain SL254... [more]
URK_SALHS1.007e-1137.35Uridine kinase OS=Salmonella heidelberg (strain SL... [more]
URK_SALG21.007e-1137.35Uridine kinase OS=Salmonella gallinarum (strain 28... [more]
URK_SALEP1.007e-1137.35Uridine kinase OS=Salmonella enteritidis PT4 (stra... [more]
URK_SALDC1.007e-1137.35Uridine kinase OS=Salmonella dublin (strain CT_020... [more]
URK_SALCH1.007e-1137.35Uridine kinase OS=Salmonella choleraesuis GN=udk P... [more]
URK_SALA41.007e-1137.35Uridine kinase OS=Salmonella agona (strain SL483) ... [more]
URK_LACLS1.007e-1139.02Uridine kinase OS=Lactococcus lactis subsp. cremor... [more]
URK_LACLM1.007e-1139.02Uridine kinase OS=Lactococcus lactis subsp. cremor... [more]
URK_HAEIN1.007e-1143.21Uridine kinase OS=Haemophilus influenzae GN=udk PE... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00231 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00231 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623140 ID=BQ623140; Name=BQ623140; organism=Citrus sinensis; type=EST; length=611bp
ACAATCATGTCACCGGTCTCTTGGACCCCCCCGAGCTCATCAAGCCCCCC
AAGATCCTTGTCATTGAAGGCTTGCACCCAATGTATGATGCTCGGGTGAG
AGAGCTCTTGGACTTTAGTATCTATTTGGACATTAGCAATGAGGTTAAAT
TTGCATGGAAAATTCAGAGAGACATGACAGAGCGAGGACACAGTCTTGAG
AGCATCAAGGCTAGTATTGAAGCCCGAAAGCCAGATTTTGATGCCTATAT
TGATCCACAAAAGCAATATGCTGATGCAGTGATTGAAGTGTTACCAACCC
AACTGATTCCGGACGATAATGAAGGAAAGGTTTTGAGAGTTAGGTTGATC
ATGAAAGAAGGAGTGAAGCACTTCAGCCCGGTTTATCTGTTTGATGAAGG
ATCAACAATCGAATGGATACCTTGCGGAAGGAAGCTTACATGTTCTTACC
CCGGCATCAAATTCTCTTATGGCCCTGACGCTTACTTTGGCCATGAGGTC
TCGATTTTTGGAAATGGATGGGAAATTTGACAGGTTAGATGAGCTAATTT
ATGTCGAAAGCCATCTAAGCAACTTATCAACCAAGTTCTATGGGAGAAGT
CACCCAGCAAT
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