BQ623140

Overview
NameBQ623140
Unique NameBQ623140
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length611
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10009 contig Csv1_Contig10009:956..1565. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623140 vs. ExPASy Swiss-Prot
Match: URK_BORDL (Uridine kinase OS=Borrelia duttonii (strain Ly) GN=udk PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.316e-11
Identity = 31/83 (37.35%), Postives = 55/83 (66.27%), Query Frame = 3
Query:   39 IKPPKILVIEGLHPMYDARVRELLDFSIYLDISNEVKFAWKIQRDMTERGHSLES-IKASIEARKPDFDAYIDPQKQYADAVI 284
            I P  I+++EG+    + RVR L+D  IY+D  N+++F  +++RDM++RG +LES I+  +   +  +  +I+P K+YAD +I
Sbjct:   96 IVPTPIIIVEGIMIFVEERVRNLIDLKIYIDTPNDIRFIRRLERDMSKRGRTLESVIEQYLRTTRAGYYRFIEPTKEYADLII 178          
BLAST of BQ623140 vs. ExPASy Swiss-Prot
Match: URK_PROMH (Uridine kinase OS=Proteus mirabilis (strain HI4320) GN=udk PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.718e-11
Identity = 34/82 (41.46%), Postives = 56/82 (68.29%), Query Frame = 3
Query:   42 KPPKILVIEGLHPMYDARVRELLDFSIYLDISNEVKFAWKIQRDMTERGHSLES-IKASIEARKPDFDAYIDPQKQYADAVI 284
            KP K+++IEG+  + D R+RE +DFSI++D   ++    +I+RD+ ERG SL+S I+   +  +P F  +I+P KQYAD ++
Sbjct:  110 KPKKVIIIEGILLLTDKRLREEMDFSIFVDTPLDICLMRRIKRDVNERGRSLDSVIEQYNKTVRPMFFQFIEPSKQYADIIV 191          
BLAST of BQ623140 vs. ExPASy Swiss-Prot
Match: URK_LACLA (Uridine kinase OS=Lactococcus lactis subsp. lactis GN=udk PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.244e-11
Identity = 31/82 (37.80%), Postives = 57/82 (69.51%), Query Frame = 3
Query:   42 KPPKILVIEGLHPMYDARVRELLDFSIYLDISNEVKFAWKIQRDMTERGHSLES-IKASIEARKPDFDAYIDPQKQYADAVI 284
            +P  +L++EG+  + D R+R+L+D  I++D  ++V+   +I+RD+ ERG +L+S I   ++A KP +  +I+P K+YAD +I
Sbjct:  102 EPVDVLIVEGILVLEDERLRDLMDIKIFVDTDDDVRIIRRIRRDIEERGRTLDSVITQYLDAVKPMYHQFIEPTKRYADVII 183          
BLAST of BQ623140 vs. ExPASy Swiss-Prot
Match: URK_KLEP7 (Uridine kinase OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=udk PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.244e-11
Identity = 31/83 (37.35%), Postives = 57/83 (68.67%), Query Frame = 3
Query:   39 IKPPKILVIEGLHPMYDARVRELLDFSIYLDISNEVKFAWKIQRDMTERGHSLESIKASIEAR-KPDFDAYIDPQKQYADAVI 284
            ++P K++++EG+  + DAR+R  L+FSI++D   ++    +I+RD+ ERG S++S+ A  +   +P F  +I+P KQYAD ++
Sbjct:  109 VEPKKVIILEGILLLTDARLRNELNFSIFVDTPLDICLMRRIKRDVNERGRSMDSVMAQYQKTVRPMFLQFIEPSKQYADIIV 191          
BLAST of BQ623140 vs. ExPASy Swiss-Prot
Match: URK_KLEP3 (Uridine kinase OS=Klebsiella pneumoniae (strain 342) GN=udk PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.244e-11
Identity = 31/83 (37.35%), Postives = 57/83 (68.67%), Query Frame = 3
Query:   39 IKPPKILVIEGLHPMYDARVRELLDFSIYLDISNEVKFAWKIQRDMTERGHSLESIKASIEAR-KPDFDAYIDPQKQYADAVI 284
            ++P K++++EG+  + DAR+R  L+FSI++D   ++    +I+RD+ ERG S++S+ A  +   +P F  +I+P KQYAD ++
Sbjct:  109 VEPKKVIILEGILLLTDARLRNELNFSIFVDTPLDICLMRRIKRDVNERGRSMDSVMAQYQKTVRPMFLQFIEPSKQYADIIV 191          
BLAST of BQ623140 vs. ExPASy Swiss-Prot
Match: URK_BORT9 (Uridine kinase OS=Borrelia turicatae (strain 91E135) GN=udk PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.244e-11
Identity = 30/83 (36.14%), Postives = 55/83 (66.27%), Query Frame = 3
Query:   39 IKPPKILVIEGLHPMYDARVRELLDFSIYLDISNEVKFAWKIQRDMTERGHSLES-IKASIEARKPDFDAYIDPQKQYADAVI 284
            I P  ++++EG+    + RVR L+D  IY+D  N+++F  +++RDM++RG +LES I+  +   +  +  +I+P K+YAD +I
Sbjct:   96 IVPTPVVIVEGIMIFVEERVRNLIDLKIYIDTPNDIRFIRRLERDMSKRGRTLESVIEQYLSTTRAGYYRFIEPTKEYADLII 178          
BLAST of BQ623140 vs. ExPASy Swiss-Prot
Match: URK_BORHD (Uridine kinase OS=Borrelia hermsii (strain DAH) GN=udk PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.244e-11
Identity = 30/83 (36.14%), Postives = 55/83 (66.27%), Query Frame = 3
Query:   39 IKPPKILVIEGLHPMYDARVRELLDFSIYLDISNEVKFAWKIQRDMTERGHSLES-IKASIEARKPDFDAYIDPQKQYADAVI 284
            I P  ++++EG+    + RVR L+D  IY+D  N+++F  +++RDM++RG +LES I+  +   +  +  +I+P K+YAD +I
Sbjct:   96 IVPTPVVIVEGIMIFVEERVRNLIDLKIYIDTPNDIRFIRRLERDMSKRGRTLESVIEQYLSTTRAGYYRFIEPTKEYADLII 178          
BLAST of BQ623140 vs. ExPASy Swiss-Prot
Match: URK_STRGC (Uridine kinase OS=Streptococcus gordonii (strain Challis / ATCC 35105 / CH1 / DL1 / V288) GN=udk PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 3.828e-11
Identity = 31/82 (37.80%), Postives = 55/82 (67.07%), Query Frame = 3
Query:   42 KPPKILVIEGLHPMYDARVRELLDFSIYLDISNEVKFAWKIQRDMTERGHSLES-IKASIEARKPDFDAYIDPQKQYADAVI 284
            +P  + ++EG+  + D R+R+L+D  I++D  ++V+   +I+RDM ERG SL+S I+  +   KP +  +I+P K+YAD +I
Sbjct:  103 EPKDVFIVEGILVLEDQRLRDLMDIKIFVDTDDDVRIIRRIKRDMEERGRSLDSVIEQYLGVVKPMYHQFIEPTKRYADVII 184          
BLAST of BQ623140 vs. ExPASy Swiss-Prot
Match: URK_LACS1 (Uridine kinase OS=Lactobacillus salivarius subsp. salivarius (strain UCC118) GN=udk PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 3.828e-11
Identity = 33/109 (30.28%), Postives = 66/109 (60.55%), Query Frame = 3
Query:   33 ELIKPPKILVIEGLHPMYDARVRELLDFSIYLDISNEVKFAWKIQRDMTERGHSLESIKASIEAR-KPDFDAYIDPQKQYADAVIEVLPTQLIPDDNEGKVLRVRLIMK 356
            E ++P +++++EG+  + D  +R+L+D  I++D  ++++   +IQRD+ ERG SL+S+    ++  KP +  +I+P K+YAD +        +P+  E +V    L+ K
Sbjct:  103 EKVEPKEVIILEGILVLNDPALRDLMDIKIFVDTDDDIRIIRRIQRDIEERGRSLQSVIDQYKSTVKPMYHQFIEPTKRYADII--------VPEGGENQVAIDLLVTK 203          
BLAST of BQ623140 vs. ExPASy Swiss-Prot
Match: URK_STRPZ (Uridine kinase OS=Streptococcus pyogenes serotype M49 (strain NZ131) GN=udk PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 5.000e-11
Identity = 31/81 (38.27%), Postives = 53/81 (65.43%), Query Frame = 3
Query:   45 PPKILVIEGLHPMYDARVRELLDFSIYLDISNEVKFAWKIQRDMTERGHSLES-IKASIEARKPDFDAYIDPQKQYADAVI 284
            P  ++++EG+  + D R+R+L+D  +++D  ++++   +I+RDM ERG SLES I       KP +  +I+P K+YAD VI
Sbjct:  104 PQDVIIVEGILVLEDERLRDLMDIKLFVDTDDDIRIIRRIKRDMMERGRSLESIIDQYTSVVKPMYHQFIEPSKRYADIVI 184          
The following BLAST results are available for this feature:
BLAST of BQ623140 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 63
Match NameE-valueIdentityDescription
URK_BORDL1.316e-1137.35Uridine kinase OS=Borrelia duttonii (strain Ly) GN... [more]
URK_PROMH1.718e-1141.46Uridine kinase OS=Proteus mirabilis (strain HI4320... [more]
URK_LACLA2.244e-1137.80Uridine kinase OS=Lactococcus lactis subsp. lactis... [more]
URK_KLEP72.244e-1137.35Uridine kinase OS=Klebsiella pneumoniae subsp. pne... [more]
URK_KLEP32.244e-1137.35Uridine kinase OS=Klebsiella pneumoniae (strain 34... [more]
URK_BORT92.244e-1136.14Uridine kinase OS=Borrelia turicatae (strain 91E13... [more]
URK_BORHD2.244e-1136.14Uridine kinase OS=Borrelia hermsii (strain DAH) GN... [more]
URK_STRGC3.828e-1137.80Uridine kinase OS=Streptococcus gordonii (strain C... [more]
URK_LACS13.828e-1130.28Uridine kinase OS=Lactobacillus salivarius subsp. ... [more]
URK_STRPZ5.000e-1138.27Uridine kinase OS=Streptococcus pyogenes serotype ... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00231 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00231 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623140 ID=BQ623140; Name=BQ623140; organism=Citrus sinensis; type=EST; length=611bp
ACAATCATGTCACCGGTCTCTTGGACCCCCCCGAGCTCATCAAGCCCCCC
AAGATCCTTGTCATTGAAGGCTTGCACCCAATGTATGATGCTCGGGTGAG
AGAGCTCTTGGACTTTAGTATCTATTTGGACATTAGCAATGAGGTTAAAT
TTGCATGGAAAATTCAGAGAGACATGACAGAGCGAGGACACAGTCTTGAG
AGCATCAAGGCTAGTATTGAAGCCCGAAAGCCAGATTTTGATGCCTATAT
TGATCCACAAAAGCAATATGCTGATGCAGTGATTGAAGTGTTACCAACCC
AACTGATTCCGGACGATAATGAAGGAAAGGTTTTGAGAGTTAGGTTGATC
ATGAAAGAAGGAGTGAAGCACTTCAGCCCGGTTTATCTGTTTGATGAAGG
ATCAACAATCGAATGGATACCTTGCGGAAGGAAGCTTACATGTTCTTACC
CCGGCATCAAATTCTCTTATGGCCCTGACGCTTACTTTGGCCATGAGGTC
TCGATTTTTGGAAATGGATGGGAAATTTGACAGGTTAGATGAGCTAATTT
ATGTCGAAAGCCATCTAAGCAACTTATCAACCAAGTTCTATGGGAGAAGT
CACCCAGCAAT
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