BQ623140

Overview
NameBQ623140
Unique NameBQ623140
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length611
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10009 contig Csv1_Contig10009:956..1565. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623140 vs. ExPASy Swiss-Prot
Match: URK_STRPG (Uridine kinase OS=Streptococcus pyogenes serotype M5 (strain Manfredo) GN=udk PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 5.000e-11
Identity = 31/81 (38.27%), Postives = 53/81 (65.43%), Query Frame = 3
Query:   45 PPKILVIEGLHPMYDARVRELLDFSIYLDISNEVKFAWKIQRDMTERGHSLES-IKASIEARKPDFDAYIDPQKQYADAVI 284
            P  ++++EG+  + D R+R+L+D  +++D  ++++   +I+RDM ERG SLES I       KP +  +I+P K+YAD VI
Sbjct:  104 PQDVIIVEGILVLEDERLRDLMDIKLFVDTDDDIRIIRRIKRDMMERGRSLESIIDQYTSVVKPMYHQFIEPSKRYADIVI 184          
BLAST of BQ623140 vs. ExPASy Swiss-Prot
Match: URK_STRP8 (Uridine kinase OS=Streptococcus pyogenes serotype M18 GN=udk PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 5.000e-11
Identity = 31/81 (38.27%), Postives = 53/81 (65.43%), Query Frame = 3
Query:   45 PPKILVIEGLHPMYDARVRELLDFSIYLDISNEVKFAWKIQRDMTERGHSLES-IKASIEARKPDFDAYIDPQKQYADAVI 284
            P  ++++EG+  + D R+R+L+D  +++D  ++++   +I+RDM ERG SLES I       KP +  +I+P K+YAD VI
Sbjct:  104 PQDVIIVEGILVLEDERLRDLMDIKLFVDTDDDIRIIRRIKRDMMERGRSLESIIDQYTSVVKPMYHQFIEPSKRYADIVI 184          
BLAST of BQ623140 vs. ExPASy Swiss-Prot
Match: URK_STRP6 (Uridine kinase OS=Streptococcus pyogenes serotype M6 GN=udk PE=1 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 5.000e-11
Identity = 31/81 (38.27%), Postives = 53/81 (65.43%), Query Frame = 3
Query:   45 PPKILVIEGLHPMYDARVRELLDFSIYLDISNEVKFAWKIQRDMTERGHSLES-IKASIEARKPDFDAYIDPQKQYADAVI 284
            P  ++++EG+  + D R+R+L+D  +++D  ++++   +I+RDM ERG SLES I       KP +  +I+P K+YAD VI
Sbjct:  104 PQDVIIVEGILVLEDERLRDLMDIKLFVDTDDDIRIIRRIKRDMMERGRSLESIIDQYTSVVKPMYHQFIEPSKRYADIVI 184          
BLAST of BQ623140 vs. ExPASy Swiss-Prot
Match: URK_STRP3 (Uridine kinase OS=Streptococcus pyogenes serotype M3 GN=udk PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 5.000e-11
Identity = 31/81 (38.27%), Postives = 53/81 (65.43%), Query Frame = 3
Query:   45 PPKILVIEGLHPMYDARVRELLDFSIYLDISNEVKFAWKIQRDMTERGHSLES-IKASIEARKPDFDAYIDPQKQYADAVI 284
            P  ++++EG+  + D R+R+L+D  +++D  ++++   +I+RDM ERG SLES I       KP +  +I+P K+YAD VI
Sbjct:  104 PQDVIIVEGILVLEDERLRDLMDIKLFVDTDDDIRIIRRIKRDMMERGRSLESIIDQYTSVVKPMYHQFIEPSKRYADIVI 184          
BLAST of BQ623140 vs. ExPASy Swiss-Prot
Match: URK_STRP1 (Uridine kinase OS=Streptococcus pyogenes serotype M1 GN=udk PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 5.000e-11
Identity = 31/81 (38.27%), Postives = 53/81 (65.43%), Query Frame = 3
Query:   45 PPKILVIEGLHPMYDARVRELLDFSIYLDISNEVKFAWKIQRDMTERGHSLES-IKASIEARKPDFDAYIDPQKQYADAVI 284
            P  ++++EG+  + D R+R+L+D  +++D  ++++   +I+RDM ERG SLES I       KP +  +I+P K+YAD VI
Sbjct:  104 PQDVIIVEGILVLEDERLRDLMDIKLFVDTDDDIRIIRRIKRDMMERGRSLESIIDQYTSVVKPMYHQFIEPSKRYADIVI 184          
BLAST of BQ623140 vs. ExPASy Swiss-Prot
Match: UCKA_DICDI (Uridine-cytidine kinase A OS=Dictyostelium discoideum GN=udkA PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 5.000e-11
Identity = 29/78 (37.18%), Postives = 52/78 (66.67%), Query Frame = 3
Query:   54 ILVIEGLHPMYDARVRELLDFSIYLDISNEVKFAWKIQRDMTERGHSLESIKASIEA-RKPDFDAYIDPQKQYADAVI 284
            ++++EG+  +Y   +R+L+D  I++D  ++V+ A +++RD+ ERG +LES+        KP FD YI P K+YAD ++
Sbjct:  171 VIILEGILTLYSKELRDLMDIKIFIDTDDDVRLARRLKRDIAERGRTLESVLHQYNTFVKPSFDDYIIPLKKYADIIV 248          
BLAST of BQ623140 vs. ExPASy Swiss-Prot
Match: URK_LISMO (Uridine kinase OS=Listeria monocytogenes GN=udk PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 6.530e-11
Identity = 28/85 (32.94%), Postives = 59/85 (69.41%), Query Frame = 3
Query:   33 ELIKPPKILVIEGLHPMYDARVRELLDFSIYLDISNEVKFAWKIQRDMTERGHSLES-IKASIEARKPDFDAYIDPQKQYADAVI 284
            E+ +P +++++EG+  + D R+R+L+D  +Y+D  ++++F  ++ RDM ERG +++S I+  +   KP  + +I+P K++AD +I
Sbjct:  100 EIQEPREVIILEGILILEDKRLRDLMDIKVYVDTDDDIRFIRRLLRDMKERGRTMDSVIEQYLSVVKPMHNEFIEPTKKFADIII 184          
BLAST of BQ623140 vs. ExPASy Swiss-Prot
Match: URK_LISMH (Uridine kinase OS=Listeria monocytogenes serotype 4a (strain HCC23) GN=udk PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 6.530e-11
Identity = 28/85 (32.94%), Postives = 59/85 (69.41%), Query Frame = 3
Query:   33 ELIKPPKILVIEGLHPMYDARVRELLDFSIYLDISNEVKFAWKIQRDMTERGHSLES-IKASIEARKPDFDAYIDPQKQYADAVI 284
            E+ +P +++++EG+  + D R+R+L+D  +Y+D  ++++F  ++ RDM ERG +++S I+  +   KP  + +I+P K++AD +I
Sbjct:  100 EIQEPREVIILEGILILEDKRLRDLMDIKVYVDTDDDIRFIRRLLRDMKERGRTMDSVIEQYLSVVKPMHNEFIEPTKKFADIII 184          
BLAST of BQ623140 vs. ExPASy Swiss-Prot
Match: URK_LISMF (Uridine kinase OS=Listeria monocytogenes serotype 4b (strain F2365) GN=udk PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 6.530e-11
Identity = 28/85 (32.94%), Postives = 59/85 (69.41%), Query Frame = 3
Query:   33 ELIKPPKILVIEGLHPMYDARVRELLDFSIYLDISNEVKFAWKIQRDMTERGHSLES-IKASIEARKPDFDAYIDPQKQYADAVI 284
            E+ +P +++++EG+  + D R+R+L+D  +Y+D  ++++F  ++ RDM ERG +++S I+  +   KP  + +I+P K++AD +I
Sbjct:  100 EIQEPREVIILEGILILEDKRLRDLMDIKVYVDTDDDIRFIRRLLRDMKERGRTMDSVIEQYLSVVKPMHNEFIEPTKKFADIII 184          
BLAST of BQ623140 vs. ExPASy Swiss-Prot
Match: URK_LISMC (Uridine kinase OS=Listeria monocytogenes serotype 4b (strain Clip81459) GN=udk PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 6.530e-11
Identity = 28/85 (32.94%), Postives = 59/85 (69.41%), Query Frame = 3
Query:   33 ELIKPPKILVIEGLHPMYDARVRELLDFSIYLDISNEVKFAWKIQRDMTERGHSLES-IKASIEARKPDFDAYIDPQKQYADAVI 284
            E+ +P +++++EG+  + D R+R+L+D  +Y+D  ++++F  ++ RDM ERG +++S I+  +   KP  + +I+P K++AD +I
Sbjct:  100 EIQEPREVIILEGILILEDKRLRDLMDIKVYVDTDDDIRFIRRLLRDMKERGRTMDSVIEQYLSVVKPMHNEFIEPTKKFADIII 184          
The following BLAST results are available for this feature:
BLAST of BQ623140 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 63
Match NameE-valueIdentityDescription
URK_STRPG5.000e-1138.27Uridine kinase OS=Streptococcus pyogenes serotype ... [more]
URK_STRP85.000e-1138.27Uridine kinase OS=Streptococcus pyogenes serotype ... [more]
URK_STRP65.000e-1138.27Uridine kinase OS=Streptococcus pyogenes serotype ... [more]
URK_STRP35.000e-1138.27Uridine kinase OS=Streptococcus pyogenes serotype ... [more]
URK_STRP15.000e-1138.27Uridine kinase OS=Streptococcus pyogenes serotype ... [more]
UCKA_DICDI5.000e-1137.18Uridine-cytidine kinase A OS=Dictyostelium discoid... [more]
URK_LISMO6.530e-1132.94Uridine kinase OS=Listeria monocytogenes GN=udk PE... [more]
URK_LISMH6.530e-1132.94Uridine kinase OS=Listeria monocytogenes serotype ... [more]
URK_LISMF6.530e-1132.94Uridine kinase OS=Listeria monocytogenes serotype ... [more]
URK_LISMC6.530e-1132.94Uridine kinase OS=Listeria monocytogenes serotype ... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00231 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00231 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623140 ID=BQ623140; Name=BQ623140; organism=Citrus sinensis; type=EST; length=611bp
ACAATCATGTCACCGGTCTCTTGGACCCCCCCGAGCTCATCAAGCCCCCC
AAGATCCTTGTCATTGAAGGCTTGCACCCAATGTATGATGCTCGGGTGAG
AGAGCTCTTGGACTTTAGTATCTATTTGGACATTAGCAATGAGGTTAAAT
TTGCATGGAAAATTCAGAGAGACATGACAGAGCGAGGACACAGTCTTGAG
AGCATCAAGGCTAGTATTGAAGCCCGAAAGCCAGATTTTGATGCCTATAT
TGATCCACAAAAGCAATATGCTGATGCAGTGATTGAAGTGTTACCAACCC
AACTGATTCCGGACGATAATGAAGGAAAGGTTTTGAGAGTTAGGTTGATC
ATGAAAGAAGGAGTGAAGCACTTCAGCCCGGTTTATCTGTTTGATGAAGG
ATCAACAATCGAATGGATACCTTGCGGAAGGAAGCTTACATGTTCTTACC
CCGGCATCAAATTCTCTTATGGCCCTGACGCTTACTTTGGCCATGAGGTC
TCGATTTTTGGAAATGGATGGGAAATTTGACAGGTTAGATGAGCTAATTT
ATGTCGAAAGCCATCTAAGCAACTTATCAACCAAGTTCTATGGGAGAAGT
CACCCAGCAAT
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