BQ623147

Overview
NameBQ623147
Unique NameBQ623147
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length649
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2169 contig Csv1_Contig2169:897..1543. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623147 vs. ExPASy Swiss-Prot
Match: EF1A_PODAN (Elongation factor 1-alpha OS=Podospora anserina GN=TEF PE=3 SV=1)

HSP 1 Score: 224.942 bits (572), Expect = 1.428e-62
Identity = 104/147 (70.75%), Postives = 130/147 (88.44%), Query Frame = 2
Query:   59 KRLQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVEK 499
            ++L E +PGDNVGFNVKNV+VK+++RG VA +SK+DP   AA+F +QVI++NHPGQ+G GYAPVLDCHT+HIA KFSEL+ KIDRR+GK +E+ PKF+K+GDA +VKM+P+KPM VE F++YPPLGRFAVRDMRQTVAVGVIK VEK
Sbjct:  296 EQLAEGVPGDNVGFNVKNVSVKEIRRGNVAGDSKNDPPMGAASFDAQVIVLNHPGQVGAGYAPVLDCHTAHIACKFSELLQKIDRRTGKAVEESPKFIKSGDAAIVKMVPSKPMCVEAFTEYPPLGRFAVRDMRQTVAVGVIKKVEK 442          

HSP 2 Score: 36.1946 bits (82), Expect = 1.428e-62
Identity = 15/21 (71.43%), Postives = 17/21 (80.95%), Query Frame = 3
Query:    3 TFGPSGLTTEVKSVEMHHRSV 65
            TF PS +TTEVKSVEMHH  +
Sbjct:  278 TFAPSNVTTEVKSVEMHHEQL 298          
BLAST of BQ623147 vs. ExPASy Swiss-Prot
Match: EF1A4_OSCTI (Elongation factor 1-alpha 4 OS=Oscheius tipulae GN=eft-4 PE=3 SV=1)

HSP 1 Score: 224.557 bits (571), Expect = 1.862e-62
Identity = 106/147 (72.11%), Postives = 128/147 (87.07%), Query Frame = 2
Query:   65 LQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVEKKD 505
            L EA PGDNVGFN KNV+VKD++RG V S+SK+DPA+E+ +FT+QVI+MNHPGQIG GY PVLDCHT+HIA KF+EL  K+DRR+GK++E  PKFLK+GDAG+V++IPTKP+ VE F+DY PLGRFAVRDMRQTVAVGVIK V K D
Sbjct:  299 LPEAQPGDNVGFNEKNVSVKDIRRGSVCSDSKNDPAKESKSFTAQVIVMNHPGQIGAGYTPVLDCHTAHIACKFAELKEKVDRRTGKKVEDLPKFLKSGDAGIVELIPTKPLCVEAFTDYAPLGRFAVRDMRQTVAVGVIKGVTKDD 445          

HSP 2 Score: 36.1946 bits (82), Expect = 1.862e-62
Identity = 15/21 (71.43%), Postives = 17/21 (80.95%), Query Frame = 3
Query:    3 TFGPSGLTTEVKSVEMHHRSV 65
            TF P  +TTEVKSVEMHH S+
Sbjct:  279 TFAPQNVTTEVKSVEMHHESL 299          
BLAST of BQ623147 vs. ExPASy Swiss-Prot
Match: EF1A_PODCU (Elongation factor 1-alpha OS=Podospora curvicolla GN=TEF PE=3 SV=1)

HSP 1 Score: 224.172 bits (570), Expect = 2.428e-62
Identity = 104/147 (70.75%), Postives = 130/147 (88.44%), Query Frame = 2
Query:   59 KRLQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVEK 499
            ++L E +PGDNVGFNVKNV+VK+++RG VA +SK+DP   AA+F +QVI++NHPGQ+G GYAPVLDCHT+HIA KF+EL+ KIDRR+GK +E+ PKF+K+GDA +VKMIP+KPM VE F++YPPLGRFAVRDMRQTVAVGVIK VEK
Sbjct:  296 EQLSEGVPGDNVGFNVKNVSVKEIRRGNVAGDSKNDPPLGAASFDAQVIVLNHPGQVGAGYAPVLDCHTAHIACKFAELLQKIDRRTGKAVEESPKFIKSGDAAIVKMIPSKPMCVEAFTEYPPLGRFAVRDMRQTVAVGVIKKVEK 442          

HSP 2 Score: 36.1946 bits (82), Expect = 2.428e-62
Identity = 15/21 (71.43%), Postives = 17/21 (80.95%), Query Frame = 3
Query:    3 TFGPSGLTTEVKSVEMHHRSV 65
            TF PS +TTEVKSVEMHH  +
Sbjct:  278 TFAPSNVTTEVKSVEMHHEQL 298          
BLAST of BQ623147 vs. ExPASy Swiss-Prot
Match: EF1A_PICGU (Elongation factor 1-alpha OS=Pichia guilliermondii GN=TEF1 PE=3 SV=2)

HSP 1 Score: 223.016 bits (567), Expect = 2.428e-62
Identity = 103/152 (67.76%), Postives = 129/152 (84.87%), Query Frame = 2
Query:   59 KRLQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVEKKDPTG 514
            ++L E +PGDNVGFNVKNV+VK+++RG V  +SK+DP +   +FT+QVI++NHPGQI  GY+PVLDCHT+HIA KF  L+ KIDRR+GK++E  PKF+K+GDA +VKM+P+KPM VE F+DYPPLGRFAVRDMRQTVAVGVIKSVEK D  G
Sbjct:  295 EQLVEGVPGDNVGFNVKNVSVKEIRRGNVCGDSKNDPPKGCDSFTAQVIVLNHPGQISAGYSPVLDCHTAHIACKFDTLLEKIDRRTGKKMEDNPKFVKSGDASIVKMVPSKPMCVEAFTDYPPLGRFAVRDMRQTVAVGVIKSVEKSDKAG 446          

HSP 2 Score: 37.3502 bits (85), Expect = 2.428e-62
Identity = 15/21 (71.43%), Postives = 18/21 (85.71%), Query Frame = 3
Query:    3 TFGPSGLTTEVKSVEMHHRSV 65
            TF P+G+TTEVKSVEMHH  +
Sbjct:  277 TFAPAGVTTEVKSVEMHHEQL 297          
BLAST of BQ623147 vs. ExPASy Swiss-Prot
Match: EF1A_STYLE (Elongation factor 1-alpha OS=Stylonychia lemnae GN=EFAA PE=3 SV=1)

HSP 1 Score: 225.713 bits (574), Expect = 3.167e-62
Identity = 104/150 (69.33%), Postives = 129/150 (86.00%), Query Frame = 2
Query:   65 LQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVEKKDPTG 514
            L EA PGDNVGF VKN++VKDL+RG+VAS+SK+DPA++  NF +QVI++NHPGQI  GYAPVLDCHT+HIA KF E+ +K+DRRSGK LE+EPKF+K+G+A +V+M+P KPM VE F+ YPPLGRFAVRDM+QTVAVGVIK V KK+  G
Sbjct:  287 LTEAEPGDNVGFTVKNLSVKDLRRGYVASDSKNDPAKDTTNFLAQVIVLNHPGQIQKGYAPVLDCHTAHIACKFDEIESKVDRRSGKVLEEEPKFIKSGEAALVRMVPQKPMCVEAFNQYPPLGRFAVRDMKQTVAVGVIKEVVKKEQKG 436          

HSP 2 Score: 34.2686 bits (77), Expect = 3.167e-62
Identity = 14/21 (66.67%), Postives = 16/21 (76.19%), Query Frame = 3
Query:    3 TFGPSGLTTEVKSVEMHHRSV 65
            TF P  +TTE KSVEMHH S+
Sbjct:  267 TFAPMNITTECKSVEMHHESL 287          
BLAST of BQ623147 vs. ExPASy Swiss-Prot
Match: EF1A_ASPOR (Elongation factor 1-alpha OS=Aspergillus oryzae GN=tef1 PE=3 SV=1)

HSP 1 Score: 223.787 bits (569), Expect = 5.383e-62
Identity = 104/147 (70.75%), Postives = 130/147 (88.44%), Query Frame = 2
Query:   59 KRLQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVEK 499
            ++LQ   PGDNVGFNVKNV+VK+++RG VA +SK+DP     +F +QVI++NHPGQ+GNGYAPVLDCHT+HIA KF+EL+ KIDRR+GK +E +PKF+K+GDA +VKMIP+KPM VE+F+D+PPLGRFAVRDMRQTVAVGVIKSVEK
Sbjct:  296 QQLQAGNPGDNVGFNVKNVSVKEVRRGNVAGDSKNDPPAGCDSFNAQVIVLNHPGQVGNGYAPVLDCHTAHIACKFAELLEKIDRRTGKSVEDKPKFIKSGDAAIVKMIPSKPMCVESFTDFPPLGRFAVRDMRQTVAVGVIKSVEK 442          

HSP 2 Score: 35.4242 bits (80), Expect = 5.383e-62
Identity = 14/21 (66.67%), Postives = 18/21 (85.71%), Query Frame = 3
Query:    3 TFGPSGLTTEVKSVEMHHRSV 65
            TF P+ +TTEVKSVEMHH+ +
Sbjct:  278 TFAPANVTTEVKSVEMHHQQL 298          
BLAST of BQ623147 vs. ExPASy Swiss-Prot
Match: EF1A2_SCHPO (Elongation factor 1-alpha-B/C OS=Schizosaccharomyces pombe GN=tef1b PE=1 SV=1)

HSP 1 Score: 220.32 bits (560), Expect = 5.383e-62
Identity = 104/148 (70.27%), Postives = 126/148 (85.14%), Query Frame = 2
Query:   65 LQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVEKKDP 508
            L   LPGDNVGFNVKNV+VKD++RG V  +SK+DP    A+FT+QVII+NHPGQI  GY+PVLDCHT+HIA KF+EL+ KIDRRSGK++E+ PKF+K+GDA + KM+P+KPM VE F+DY PLGRFAVRDMRQTVAVGVIK+VEK  P
Sbjct:  297 LDAGLPGDNVGFNVKNVSVKDIRRGNVCGDSKNDPPMGCASFTAQVIILNHPGQISAGYSPVLDCHTAHIACKFAELIEKIDRRSGKKIEESPKFVKSGDACIAKMVPSKPMCVEAFTDYAPLGRFAVRDMRQTVAVGVIKAVEKVAP 444          

HSP 2 Score: 38.891 bits (89), Expect = 5.383e-62
Identity = 16/21 (76.19%), Postives = 19/21 (90.48%), Query Frame = 3
Query:    3 TFGPSGLTTEVKSVEMHHRSV 65
            TF P+G+TTEVKSVEMHH S+
Sbjct:  277 TFAPAGVTTEVKSVEMHHESL 297          
BLAST of BQ623147 vs. ExPASy Swiss-Prot
Match: EF1A1_SCHPO (Elongation factor 1-alpha-A OS=Schizosaccharomyces pombe GN=tef1a PE=1 SV=2)

HSP 1 Score: 220.32 bits (560), Expect = 5.383e-62
Identity = 104/148 (70.27%), Postives = 126/148 (85.14%), Query Frame = 2
Query:   65 LQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVEKKDP 508
            L   LPGDNVGFNVKNV+VKD++RG V  +SK+DP    A+FT+QVII+NHPGQI  GY+PVLDCHT+HIA KF+EL+ KIDRRSGK++E+ PKF+K+GDA + KM+P+KPM VE F+DY PLGRFAVRDMRQTVAVGVIK+VEK  P
Sbjct:  297 LDAGLPGDNVGFNVKNVSVKDIRRGNVCGDSKNDPPMGCASFTAQVIILNHPGQISAGYSPVLDCHTAHIACKFAELIEKIDRRSGKKIEESPKFVKSGDACIAKMVPSKPMCVEAFTDYAPLGRFAVRDMRQTVAVGVIKAVEKVAP 444          

HSP 2 Score: 38.891 bits (89), Expect = 5.383e-62
Identity = 16/21 (76.19%), Postives = 19/21 (90.48%), Query Frame = 3
Query:    3 TFGPSGLTTEVKSVEMHHRSV 65
            TF P+G+TTEVKSVEMHH S+
Sbjct:  277 TFAPAGVTTEVKSVEMHHESL 297          
BLAST of BQ623147 vs. ExPASy Swiss-Prot
Match: EF1A_PUCGR (Elongation factor 1-alpha OS=Puccinia graminis GN=TEF PE=3 SV=2)

HSP 1 Score: 223.787 bits (569), Expect = 7.018e-62
Identity = 105/149 (70.47%), Postives = 128/149 (85.91%), Query Frame = 2
Query:   59 KRLQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVEKKD 505
            ++L+  +PGDNVGFNVKNV+VKD++RG V  ++K DP +EAA+F +QVI++NHPGQIGNGY PVLDCHT+HIA KF  L  KIDRR+GK LE+ PKF+K+GDA +VKM+P+K M VE F+DYPPLGRFAVRDMRQTVAVGVIKSVEK D
Sbjct:  294 EQLEAGMPGDNVGFNVKNVSVKDIRRGNVCGDTKCDPPKEAASFVAQVIVLNHPGQIGNGYCPVLDCHTAHIACKFDTLQQKIDRRTGKALEEAPKFVKSGDACLVKMVPSKAMCVEPFADYPPLGRFAVRDMRQTVAVGVIKSVEKTD 442          

HSP 2 Score: 35.039 bits (79), Expect = 7.018e-62
Identity = 14/21 (66.67%), Postives = 17/21 (80.95%), Query Frame = 3
Query:    3 TFGPSGLTTEVKSVEMHHRSV 65
            TF P+ +TTEVKSVEMHH  +
Sbjct:  276 TFAPANVTTEVKSVEMHHEQL 296          
BLAST of BQ623147 vs. ExPASy Swiss-Prot
Match: EF1A_ASHGO (Elongation factor 1-alpha OS=Ashbya gossypii GN=TEF PE=3 SV=1)

HSP 1 Score: 219.935 bits (559), Expect = 9.152e-62
Identity = 103/152 (67.76%), Postives = 126/152 (82.89%), Query Frame = 2
Query:   59 KRLQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVEKKDPTG 514
            ++L+E +PGDNVGFNVKNV+VK+++RG V  +SK+DP + A +F + VI++NHPGQI  GY+PVLDCHT+HIA KF EL+ K DRR+GK+LE  PKFLK GDA MVK +P+KPM VE F+DYPPLGRFAVRDMRQTVAVGVIKSV K D  G
Sbjct:  295 EQLEEGVPGDNVGFNVKNVSVKEIRRGNVCGDSKNDPPKAAESFNATVIVLNHPGQISAGYSPVLDCHTAHIACKFDELLEKNDRRTGKKLEDSPKFLKAGDAAMVKFVPSKPMCVEAFTDYPPLGRFAVRDMRQTVAVGVIKSVVKSDKAG 446          

HSP 2 Score: 38.5058 bits (88), Expect = 9.152e-62
Identity = 16/21 (76.19%), Postives = 18/21 (85.71%), Query Frame = 3
Query:    3 TFGPSGLTTEVKSVEMHHRSV 65
            TF PSG+TTEVKSVEMHH  +
Sbjct:  277 TFAPSGVTTEVKSVEMHHEQL 297          
The following BLAST results are available for this feature:
BLAST of BQ623147 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 171
Match NameE-valueIdentityDescription
EF1A_PODAN1.428e-6270.75Elongation factor 1-alpha OS=Podospora anserina GN... [more]
EF1A4_OSCTI1.862e-6272.11Elongation factor 1-alpha 4 OS=Oscheius tipulae GN... [more]
EF1A_PODCU2.428e-6270.75Elongation factor 1-alpha OS=Podospora curvicolla ... [more]
EF1A_PICGU2.428e-6267.76Elongation factor 1-alpha OS=Pichia guilliermondii... [more]
EF1A_STYLE3.167e-6269.33Elongation factor 1-alpha OS=Stylonychia lemnae GN... [more]
EF1A_ASPOR5.383e-6270.75Elongation factor 1-alpha OS=Aspergillus oryzae GN... [more]
EF1A2_SCHPO5.383e-6270.27Elongation factor 1-alpha-B/C OS=Schizosaccharomyc... [more]
EF1A1_SCHPO5.383e-6270.27Elongation factor 1-alpha-A OS=Schizosaccharomyces... [more]
EF1A_PUCGR7.018e-6270.47Elongation factor 1-alpha OS=Puccinia graminis GN=... [more]
EF1A_ASHGO9.152e-6267.76Elongation factor 1-alpha OS=Ashbya gossypii GN=TE... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00238 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00238 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623147 ID=BQ623147; Name=BQ623147; organism=Citrus sinensis; type=EST; length=649bp
TGACATTTGGTCCCTCTGGATTGACAACTGAGGTTAAGTCTGTTGAGATG
CACCATCGAAGCGTCTGCAGGAGGCCCTTCCGGGTGACAATGTTGGCTTC
AACGTGAAGAACGTTGCTGTCAAGGATCTCAAGCGTGGTTTTGTTGCTTC
CAACTCGAAGGATGATCCGGCCAGGGAAGCTGCCAACTTCACTTCACAGG
TCATCATCATGAACCATCCTGGCCAGATTGGAAATGGATATGCCCCAGTG
CTTGACTGCCACACCTCCCACATTGCCGTCAAGTTTTCTGAGCTCGTGAC
GAAGATTGATAGGCGATCAGGCAAGGAGCTTGAGAAGGAGCCCAAGTTCT
TGAAGAATGGAGATGCCGGAATGGTTAAGATGATTCCCACCAAGCCCATG
GTTGTTGAGACATTCTCCGACTACCCACCCCTTGGTCGTTTTGCTGTTAG
GGACATGCGTCAGACTGTTGCTGTGGGTGTTATCAAGAGTGTTGAGAAGA
AGGATCCCACAGGTGCCAAGGTCACCAAGTCCGCAGCCAAGAAGAAATGA
GAAATTTTTATGGGTCTGTCTACAATAGTTAGGGGTTATTTTCTGTCTTT
TTTATTTTCTTTTCTGGTTTTGGTTTGCATCAATGTTTCTGCAAACAGA
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