BQ623150
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of BQ623150 vs. ExPASy Swiss-Prot
Match: RL183_ARATH (60S ribosomal protein L18-3 OS=Arabidopsis thaliana GN=RPL18C PE=2 SV=1) HSP 1 Score: 264.233 bits (674), Expect = 3.567e-79 Identity = 130/150 (86.67%), Postives = 144/150 (96.00%), Query Frame = 2 Query: 38 MGIDLVAGGKSKKSKRTAPKSDDIYLKLLVKLYRFLVRRTDSNFNKVILKRLFMSKVNKPPLSLSRLINFMKGKEDKIAVVVGTVTDDIRAYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKH 487 MGIDL+AGGKSKK+KRTAPKSDD+YLKLLVKLYRFLVRR++SNFN VILKRLFMSKVNK PLSLSRL+ FM GK+DKIAV+VGT+TDD+R +E+PA+KVTALRFTE ARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKN+REAVKH Sbjct: 1 MGIDLIAGGKSKKTKRTAPKSDDVYLKLLVKLYRFLVRRSNSNFNAVILKRLFMSKVNKAPLSLSRLVEFMTGKDDKIAVLVGTITDDLRVHEIPAMKVTALRFTERARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNSREAVKH 150 HSP 2 Score: 52.373 bits (124), Expect = 3.567e-79 Identity = 22/24 (91.67%), Postives = 23/24 (95.83%), Query Frame = 3 Query: 489 FGPAPGVPHSHTKPYVRSKGRKFE 560 FGPAPGVPHS+TKPYVR KGRKFE Sbjct: 151 FGPAPGVPHSNTKPYVRHKGRKFE 174
BLAST of BQ623150 vs. ExPASy Swiss-Prot
Match: RL18_CICAR (60S ribosomal protein L18 (Fragment) OS=Cicer arietinum GN=RPL18 PE=2 SV=1) HSP 1 Score: 243.047 bits (619), Expect = 3.261e-74 Identity = 124/147 (84.35%), Postives = 136/147 (92.52%), Query Frame = 2 Query: 47 DLVAGGKSKKSKRTAPKSDDIYLKLLVKLYRFLVRRTDSNFNKVILKRLFMSKVNKPPLSLSRLINFMKGKEDKIAVVVGTVTDDIRAYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKH 487 DL AGGK+KK+KRT+PKS+DIYLKLLVKLYRFLVRRTDSNFN VILKRLFMSKVN+PPLSLSRLI +M+GKE KI VVVG VTDDIR Y+VP +KVTAL+FTETARARI+KAGGECLTFDQLALR PL +TVLLRGPKNAREAVKH Sbjct: 1 DLKAGGKNKKTKRTSPKSNDIYLKLLVKLYRFLVRRTDSNFNAVILKRLFMSKVNRPPLSLSRLIKYMQGKEGKIGVVVGAVTDDIRVYDVPTIKVTALKFTETARARIQKAGGECLTFDQLALRLPL-TDTVLLRGPKNAREAVKH 146 HSP 2 Score: 56.9954 bits (136), Expect = 3.261e-74 Identity = 24/24 (100.00%), Postives = 24/24 (100.00%), Query Frame = 3 Query: 489 FGPAPGVPHSHTKPYVRSKGRKFE 560 FGPAPGVPHSHTKPYVRSKGRKFE Sbjct: 147 FGPAPGVPHSHTKPYVRSKGRKFE 170
BLAST of BQ623150 vs. ExPASy Swiss-Prot
Match: RL182_ARATH (60S ribosomal protein L18-2 OS=Arabidopsis thaliana GN=RPL18B PE=2 SV=2) HSP 1 Score: 263.077 bits (671), Expect = 8.020e-70 Identity = 135/186 (72.58%), Postives = 154/186 (82.80%), Query Frame = 2 Query: 38 MGIDLVAGGKSKKSKRTAPKSDDIYLKLLVKLYRFLVRRTDSNFNKVILKRLFMSKVNKPPLSLSRLINFMKGKEDKIAVVVGTVTDDIRAYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHLWSSSWRTTQPHQALRAIKGKEV*AC*RKEEQQGFQ 595 MGIDL+AGGKSKK+KRTAPKSDD+YLKL VKLYRFLVRRT+S FN VILKRLFMSKVNK PLSLSRL+ FM GKEDKIAV+VGT+TDD+R +E+PA+KVTALRFTE ARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKN+REAVKH + + KG++ K + +GF+ Sbjct: 1 MGIDLIAGGKSKKTKRTAPKSDDVYLKLTVKLYRFLVRRTNSKFNGVILKRLFMSKVNKAPLSLSRLVEFMTGKEDKIAVLVGTITDDLRVHEIPAMKVTALRFTERARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHSKPYVRAKGRKFEKARGKRKSRGFK 186
BLAST of BQ623150 vs. ExPASy Swiss-Prot
Match: RL181_ARATH (Putative 60S ribosomal protein L18-1 OS=Arabidopsis thaliana GN=RPL18A PE=2 SV=3) HSP 1 Score: 233.032 bits (593), Expect = 5.047e-69 Identity = 119/151 (78.81%), Postives = 132/151 (87.42%), Query Frame = 2 Query: 38 MGIDLVAGGKSKKSKRTAPKSDDIYLKLLVKLYRFLVRRTDSNFNKVILKRLFMSKVNKPPLSLSRLINFMKGKEDKIAVVVGTVTDDIRAYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPL-GQNTVLLRGPKNAREAVKH 487 MGIDL+AGGKSKK+KRT PKSDD+YLKLLVK R+LVRRT+S FN VILKRLFMSKVNK PLSLSRL+ +M GK+ KIAV+VGTVTDD+R +VPAL VTALRFTE+ARARI KAGGECLTFDQLAL P +NTVLLRGPKN REAVKH Sbjct: 1 MGIDLIAGGKSKKTKRTEPKSDDVYLKLLVKANRYLVRRTESKFNAVILKRLFMSKVNKAPLSLSRLVRYMDGKDGKIAVIVGTVTDDVRIEDVPALTVTALRFTESARARIHKAGGECLTFDQLALPCPTWSENTVLLRGPKNTREAVKH 151 HSP 2 Score: 49.6766 bits (117), Expect = 5.047e-69 Identity = 20/24 (83.33%), Postives = 21/24 (87.50%), Query Frame = 3 Query: 489 FGPAPGVPHSHTKPYVRSKGRKFE 560 FGPAPGVPHSHTKPYVR G+K E Sbjct: 152 FGPAPGVPHSHTKPYVRQTGKKIE 175
BLAST of BQ623150 vs. ExPASy Swiss-Prot
Match: RL18_ICTPU (60S ribosomal protein L18 OS=Ictalurus punctatus GN=rpl18 PE=2 SV=3) HSP 1 Score: 188.348 bits (477), Expect = 2.403e-56 Identity = 98/152 (64.47%), Postives = 117/152 (76.97%), Query Frame = 2 Query: 38 MGIDLVAGGKSKKSKRTAPKSDDIYLKLLVKLYRFLVRRTDSNFNKVILKRLFMSKVNKPPLSLSRLINFMK--GKEDKIAVVVGTVTDDIRAYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKH 487 MG+D + K +K RT PKS DIYL+LLVKLYRFL RR+D+ FNKV+LKRLFMSK N+PPL+LSRLI MK G+E+KIAVVVGT+TDD+R +P LKV ALR T AR RI KAGG+ +TFDQLA+ P GQ TVLL GP+ ARE +H Sbjct: 1 MGVD-IRHNKDRKVHRTEPKSQDIYLRLLVKLYRFLARRSDAPFNKVVLKRLFMSKTNRPPLALSRLIRKMKLQGRENKIAVVVGTITDDVRILNIPKLKVCALRVTAGARRRILKAGGQVMTFDQLAVTTPKGQGTVLLSGPRKAREVYRH 151 HSP 2 Score: 51.9878 bits (123), Expect = 2.403e-56 Identity = 21/24 (87.50%), Postives = 22/24 (91.67%), Query Frame = 3 Query: 489 FGPAPGVPHSHTKPYVRSKGRKFE 560 FG APG PHSHTKPY+RSKGRKFE Sbjct: 152 FGKAPGTPHSHTKPYIRSKGRKFE 175
BLAST of BQ623150 vs. ExPASy Swiss-Prot
Match: RL18_TIMBA (60S ribosomal protein L18 OS=Timarcha balearica GN=RpL18 PE=2 SV=1) HSP 1 Score: 187.193 bits (474), Expect = 5.324e-56 Identity = 96/152 (63.16%), Postives = 120/152 (78.95%), Query Frame = 2 Query: 38 MGIDLVAGGKSKKSKRTAPKSDDIYLKLLVKLYRFLVRRTDSNFNKVILKRLFMSKVNKPPLSLSRLINFMK--GKEDKIAVVVGTVTDDIRAYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKH 487 MGID + +K +RT PKS D+YL+LLVKLYR+L RRT + FNK+ILKRLFMSK+ +PP+SLS+++ FMK G+E AV+VGTVTDD R +E+P L + ALR T+TARA I KAGGE +TFDQLALR+P G TVLL+G +NAREAVKH Sbjct: 1 MGID-INHKYDRKVRRTEPKSQDVYLRLLVKLYRYLARRTGAKFNKIILKRLFMSKIYRPPISLSKVVRFMKKPGRELLTAVIVGTVTDDSRIFEIPKLSICALRVTQTARAGILKAGGEVITFDQLALRSPTGSKTVLLQGKRNAREAVKH 151 HSP 2 Score: 51.9878 bits (123), Expect = 5.324e-56 Identity = 22/24 (91.67%), Postives = 22/24 (91.67%), Query Frame = 3 Query: 489 FGPAPGVPHSHTKPYVRSKGRKFE 560 FGPAPGVPHSH KP VRSKGRKFE Sbjct: 152 FGPAPGVPHSHAKPLVRSKGRKFE 175
BLAST of BQ623150 vs. ExPASy Swiss-Prot
Match: RL18_MOUSE (60S ribosomal protein L18 OS=Mus musculus GN=Rpl18 PE=2 SV=3) HSP 1 Score: 186.422 bits (472), Expect = 6.941e-56 Identity = 97/152 (63.82%), Postives = 118/152 (77.63%), Query Frame = 2 Query: 38 MGIDLVAGGKSKKSKRTAPKSDDIYLKLLVKLYRFLVRRTDSNFNKVILKRLFMSKVNKPPLSLSRLINFMK--GKEDKIAVVVGTVTDDIRAYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKH 487 MG+D + K +K +R PKS DIYL+LLVKLYRFL RRT+S FN+V+LKRLFMS+ N+PPLSLSR+I MK G+E+K AVVVGTVTDD+R EVP LKV ALR + AR+RI KAGG+ LTFDQLAL +P G+ TVLL GP+ RE +H Sbjct: 1 MGVD-IRHNKDRKVRRKEPKSQDIYLRLLVKLYRFLARRTNSTFNQVVLKRLFMSRTNRPPLSLSRMIRKMKLPGRENKTAVVVGTVTDDVRILEVPKLKVCALRVSSRARSRILKAGGKILTFDQLALESPKGRGTVLLSGPRKGREVYRH 151 HSP 2 Score: 52.373 bits (124), Expect = 6.941e-56 Identity = 22/24 (91.67%), Postives = 22/24 (91.67%), Query Frame = 3 Query: 489 FGPAPGVPHSHTKPYVRSKGRKFE 560 FG APG PHSHTKPYVRSKGRKFE Sbjct: 152 FGKAPGTPHSHTKPYVRSKGRKFE 175
BLAST of BQ623150 vs. ExPASy Swiss-Prot
Match: RL18_RAT (60S ribosomal protein L18 OS=Rattus norvegicus GN=Rpl18 PE=2 SV=2) HSP 1 Score: 186.037 bits (471), Expect = 9.049e-56 Identity = 96/152 (63.16%), Postives = 118/152 (77.63%), Query Frame = 2 Query: 38 MGIDLVAGGKSKKSKRTAPKSDDIYLKLLVKLYRFLVRRTDSNFNKVILKRLFMSKVNKPPLSLSRLINFMK--GKEDKIAVVVGTVTDDIRAYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKH 487 MG+D + K +K +R PKS DIYL+LLVKLYRFL RRT+S FN+V+LKRLFMS+ N+PPLSLSR+I MK G+E+K AVVVGT+TDD+R EVP LKV ALR + AR+RI KAGG+ LTFDQLAL +P G+ TVLL GP+ RE +H Sbjct: 1 MGVD-IRHNKDRKVRRKEPKSQDIYLRLLVKLYRFLARRTNSTFNQVVLKRLFMSRTNRPPLSLSRMIRKMKLPGRENKTAVVVGTITDDVRILEVPKLKVCALRVSSRARSRILKAGGKILTFDQLALESPKGRGTVLLSGPRKGREVYRH 151 HSP 2 Score: 52.373 bits (124), Expect = 9.049e-56 Identity = 22/24 (91.67%), Postives = 22/24 (91.67%), Query Frame = 3 Query: 489 FGPAPGVPHSHTKPYVRSKGRKFE 560 FG APG PHSHTKPYVRSKGRKFE Sbjct: 152 FGKAPGTPHSHTKPYVRSKGRKFE 175
BLAST of BQ623150 vs. ExPASy Swiss-Prot
Match: RL18_IXOSC (60S ribosomal protein L18 OS=Ixodes scapularis GN=RpL18 PE=2 SV=1) HSP 1 Score: 181.03 bits (458), Expect = 1.180e-55 Identity = 92/152 (60.53%), Postives = 122/152 (80.26%), Query Frame = 2 Query: 38 MGIDLVAGGKSKKSKRTAPKSDDIYLKLLVKLYRFLVRRTDSNFNKVILKRLFMSKVNKPPLSLSRLINFMK--GKEDKIAVVVGTVTDDIRAYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKH 487 MGID + +K R PKS+++YL LLVK+YRFL RR+ + FN+++LKRLFMS++NKP +SL+R+ FMK G+E+ IAVVVGTVTDD+R Y+VP L++ ALR TE ARARI KAGGE LTFDQLA++AP G+ TVL++GP+N+REA +H Sbjct: 1 MGID-INHKYDRKVVRRRPKSENVYLGLLVKVYRFLARRSGAKFNRIVLKRLFMSRINKPVISLARVTRFMKKPGRENLIAVVVGTVTDDLRLYDVPKLRLCALRVTERARARILKAGGEILTFDQLAVQAPKGKGTVLMQGPRNSREACRH 151 HSP 2 Score: 56.9954 bits (136), Expect = 1.180e-55 Identity = 24/24 (100.00%), Postives = 24/24 (100.00%), Query Frame = 3 Query: 489 FGPAPGVPHSHTKPYVRSKGRKFE 560 FGPAPGVPHSHTKPYVRSKGRKFE Sbjct: 152 FGPAPGVPHSHTKPYVRSKGRKFE 175
BLAST of BQ623150 vs. ExPASy Swiss-Prot
Match: RL18_MACFA (60S ribosomal protein L18 OS=Macaca fascicularis GN=RPL18 PE=2 SV=1) HSP 1 Score: 184.496 bits (467), Expect = 2.614e-55 Identity = 96/152 (63.16%), Postives = 117/152 (76.97%), Query Frame = 2 Query: 38 MGIDLVAGGKSKKSKRTAPKSDDIYLKLLVKLYRFLVRRTDSNFNKVILKRLFMSKVNKPPLSLSRLINFMK--GKEDKIAVVVGTVTDDIRAYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKH 487 MG+D + K +K +R PKS DIYL+LLVKLYRFL RRT+S FN+V+LKRLFMS+ N+PPLSLSR+I MK G+E+K AVVVGT+TDD+R EVP LKV ALR T AR+RI +AGG+ LTFDQLAL +P G TVLL GP+ RE +H Sbjct: 1 MGVD-IRHNKDRKVRRKEPKSQDIYLRLLVKLYRFLARRTNSTFNQVVLKRLFMSRTNRPPLSLSRMIRKMKLPGRENKTAVVVGTITDDVRVQEVPKLKVCALRVTSRARSRILRAGGKILTFDQLALDSPKGCGTVLLSGPRKGREVYRH 151 HSP 2 Score: 52.373 bits (124), Expect = 2.614e-55 Identity = 22/24 (91.67%), Postives = 22/24 (91.67%), Query Frame = 3 Query: 489 FGPAPGVPHSHTKPYVRSKGRKFE 560 FG APG PHSHTKPYVRSKGRKFE Sbjct: 152 FGKAPGTPHSHTKPYVRSKGRKFE 175 The following BLAST results are available for this feature:
BLAST of BQ623150 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 39
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Sequences
The
following sequences are available for this feature:
EST sequence >BQ623150 ID=BQ623150; Name=BQ623150; organism=Citrus sinensis; type=EST; length=607bpback to top |