BQ623153

Overview
NameBQ623153
Unique NameBQ623153
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length627
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5649 contig Csv1_Contig5649:517..1143. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of BQ623153 vs. ExPASy Swiss-Prot
Match: PDILT_HUMAN (Protein disulfide-isomerase-like protein of the testis OS=Homo sapiens GN=PDILT PE=1 SV=2)

HSP 1 Score: 67.0106 bits (162), Expect = 8.954e-11
Identity = 35/95 (36.84%), Postives = 54/95 (56.84%), Query Frame = 1 
Query:   13 SDPIPETND-GDVKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEHHRAKSDGFPTILFFPAGNK 294
            S+ IP+  D G VK +VG NF+ +V D+ KDV +  YAPW   C+   P   +L +  +   +I+IAK+D T N+      D +P    FP+G++
Sbjct:  377 SEEIPKYWDQGLVKQLVGKNFNVVVFDKEKDVFVMFYAPWSKKCKMLFPLLEELGRKYQNHSTIIIAKIDVTANDIQLMYLDRYPFFRLFPSGSQ 471
The following BLAST results are available for this feature:
BLAST of BQ623153 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 51
Match NameE-valueIdentityDescription
PDILT_HUMAN8.954e-1136.84Protein disulfide-isomerase-like protein of the te... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00244 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00244 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623153 ID=BQ623153; Name=BQ623153; organism=Citrus sinensis; type=EST; length=627bp
CCTTTCTTTAAGTCTGATCCAATTCCAGAAACTAATGATGGAGATGTGAA
AATAGTGGTTGGAAATAACTTTGATGAAATTGTCTTGGATGAGTCAAAGG
ATGTTCTTCTGGAGATCTATGCCCCTTGGTGTGGGCATTGCCAAGCCTTC
GAGCCAACCTACAACAAACTGGCCAAACATCTACGTGGCGTTGATTCTAT
TGTTATCGCTAAGATGGATGGCACGACAAATGAACATCACAGGGCAAAGT
CTGATGGATTCCCAACAATTCTTTTCTTCCCAGCTGGAAACAAGAGTTTT
GATCCTATCAATGTAGATGTTGACCGTACTGTGGTGGCATTGTACAAGTT
TCTTAAGAAAAATGCTTCAATCCCCTTTAAAATCCAGAAGCCAACATCAG
CACCCAAGACGGAGAAACCAACTTCAGAACCAAAAGCTGAGTCCTCAGAT
ATCAAAGAGAGCCACGAGAGCAGTAGCGACAAAGATGTGAAGGACGAATT
GTAACTTGCCTAAAACAAGGAAGATGATATACAACGGGTGTAATGCTAAA
TTATGTACCTTTTATCAGTCATCAGGTACTAGAAAGAAATATTTATCATA
TAGTTGAATATATAGAGTGGGAGAGTA
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