BQ623154

Overview
NameBQ623154
Unique NameBQ623154
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length512
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig821 contig Csv1_Contig821:183..692. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of BQ623154 vs. ExPASy Swiss-Prot
Match: H4_MYTCA (Histone H4 OS=Mytilus californianus PE=3 SV=3)

HSP 1 Score: 151.754 bits (382), Expect = 1.760e-36
Identity = 76/78 (97.44%), Postives = 78/78 (100.00%), Query Frame = 2 
Query:   92 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLY 325
            VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK+FLENVIRDAVTYTEHA+RKTVTAMDVVYALKRQGRTLY
Sbjct:   22 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLY 99
[Close]
BLAST of BQ623154 vs. ExPASy Swiss-Prot
Match: H4_MYRRU (Histone H4 OS=Myrmica ruginodis GN=His4 PE=3 SV=2)

HSP 1 Score: 151.754 bits (382), Expect = 1.760e-36
Identity = 76/78 (97.44%), Postives = 78/78 (100.00%), Query Frame = 2 
Query:   92 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLY 325
            VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK+FLENVIRDAVTYTEHA+RKTVTAMDVVYALKRQGRTLY
Sbjct:   22 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLY 99
[Close]
BLAST of BQ623154 vs. ExPASy Swiss-Prot
Match: H4_MOUSE (Histone H4 OS=Mus musculus GN=Hist1h4a PE=1 SV=2)

HSP 1 Score: 151.754 bits (382), Expect = 1.760e-36
Identity = 76/78 (97.44%), Postives = 78/78 (100.00%), Query Frame = 2 
Query:   92 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLY 325
            VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK+FLENVIRDAVTYTEHA+RKTVTAMDVVYALKRQGRTLY
Sbjct:   22 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLY 99
[Close]
BLAST of BQ623154 vs. ExPASy Swiss-Prot
Match: H4_MASBA (Histone H4 OS=Mastigamoeba balamuthi PE=3 SV=3)

HSP 1 Score: 151.754 bits (382), Expect = 1.760e-36
Identity = 76/78 (97.44%), Postives = 78/78 (100.00%), Query Frame = 2 
Query:   92 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLY 325
            VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK+FLENVIRD+VTYTEHARRKTVTAMDVVYALKRQGRTLY
Sbjct:   27 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLY 104
[Close]
BLAST of BQ623154 vs. ExPASy Swiss-Prot
Match: H4_MACFA (Histone H4 OS=Macaca fascicularis GN=QtsA-19327 PE=1 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 1.760e-36
Identity = 76/78 (97.44%), Postives = 78/78 (100.00%), Query Frame = 2 
Query:   92 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLY 325
            VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK+FLENVIRDAVTYTEHA+RKTVTAMDVVYALKRQGRTLY
Sbjct:   22 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLY 99
[Close]
BLAST of BQ623154 vs. ExPASy Swiss-Prot
Match: H4_HUMAN (Histone H4 OS=Homo sapiens GN=HIST1H4A PE=1 SV=2)

HSP 1 Score: 151.754 bits (382), Expect = 1.760e-36
Identity = 76/78 (97.44%), Postives = 78/78 (100.00%), Query Frame = 2 
Query:   92 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLY 325
            VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK+FLENVIRDAVTYTEHA+RKTVTAMDVVYALKRQGRTLY
Sbjct:   22 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLY 99
[Close]
BLAST of BQ623154 vs. ExPASy Swiss-Prot
Match: H4_DROYA (Histone H4 OS=Drosophila yakuba GN=His4 PE=3 SV=2)

HSP 1 Score: 151.754 bits (382), Expect = 1.760e-36
Identity = 76/78 (97.44%), Postives = 78/78 (100.00%), Query Frame = 2 
Query:   92 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLY 325
            VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK+FLENVIRDAVTYTEHA+RKTVTAMDVVYALKRQGRTLY
Sbjct:   22 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLY 99
[Close]
BLAST of BQ623154 vs. ExPASy Swiss-Prot
Match: H4_DROTE (Histone H4 OS=Drosophila teissieri GN=His4 PE=3 SV=3)

HSP 1 Score: 151.754 bits (382), Expect = 1.760e-36
Identity = 76/78 (97.44%), Postives = 78/78 (100.00%), Query Frame = 2 
Query:   92 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLY 325
            VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK+FLENVIRDAVTYTEHA+RKTVTAMDVVYALKRQGRTLY
Sbjct:   22 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLY 99
[Close]
BLAST of BQ623154 vs. ExPASy Swiss-Prot
Match: H4_DROSI (Histone H4 OS=Drosophila simulans GN=His4 PE=3 SV=2)

HSP 1 Score: 151.754 bits (382), Expect = 1.760e-36
Identity = 76/78 (97.44%), Postives = 78/78 (100.00%), Query Frame = 2 
Query:   92 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLY 325
            VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK+FLENVIRDAVTYTEHA+RKTVTAMDVVYALKRQGRTLY
Sbjct:   22 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLY 99
[Close]
BLAST of BQ623154 vs. ExPASy Swiss-Prot
Match: H4_DROSE (Histone H4 OS=Drosophila sechellia GN=His4 PE=3 SV=3)

HSP 1 Score: 151.754 bits (382), Expect = 1.760e-36
Identity = 76/78 (97.44%), Postives = 78/78 (100.00%), Query Frame = 2 
Query:   92 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLY 325
            VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK+FLENVIRDAVTYTEHA+RKTVTAMDVVYALKRQGRTLY
Sbjct:   22 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLY 99
The following BLAST results are available for this feature:
BLAST of BQ623154 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 107
Match NameE-valueIdentityDescription
H4_MYTCA1.760e-3697.44Histone H4 OS=Mytilus californianus PE=3 SV=3[more]
H4_MYRRU1.760e-3697.44Histone H4 OS=Myrmica ruginodis GN=His4 PE=3 SV=2[more]
H4_MOUSE1.760e-3697.44Histone H4 OS=Mus musculus GN=Hist1h4a PE=1 SV=2[more]
H4_MASBA1.760e-3697.44Histone H4 OS=Mastigamoeba balamuthi PE=3 SV=3[more]
H4_MACFA1.760e-3697.44Histone H4 OS=Macaca fascicularis GN=QtsA-19327 PE... [more]
H4_HUMAN1.760e-3697.44Histone H4 OS=Homo sapiens GN=HIST1H4A PE=1 SV=2[more]
H4_DROYA1.760e-3697.44Histone H4 OS=Drosophila yakuba GN=His4 PE=3 SV=2[more]
H4_DROTE1.760e-3697.44Histone H4 OS=Drosophila teissieri GN=His4 PE=3 SV... [more]
H4_DROSI1.760e-3697.44Histone H4 OS=Drosophila simulans GN=His4 PE=3 SV=... [more]
H4_DROSE1.760e-3697.44Histone H4 OS=Drosophila sechellia GN=His4 PE=3 SV... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00245 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00245 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623154 ID=BQ623154; Name=BQ623154; organism=Citrus sinensis; type=EST; length=512bp
CGGAAAGTCTTTTAAGTTCCTCGCTAAAATGTCTGGGCGCGGTAAGGGAG
GCAAGGGATTGGGAAAGGGAGGCGCCAAGCGTCACCGTAAGGTGCTTCGC
GATAACATTCAGGGTATCACAAAGCCGGCAATCCGGCGTTTGGCTCGTAG
AGGTGGAGTCAAGCGTATCAGCGGCTTGATCTACGAGGAGACACGTGGCG
TCCTGAAGATATTCTTGGAGAACGTCATCCGTGACGCCGTGACCTACACT
GAGCACGCCAGGAGAAAGACCGTGACCGCGATGGACGTCGTTTACGCTCT
CAAGAGGCAGGGCAGGACTCTTTATGGATTTGGGGGTTAATTGTCTTAAG
GTTCTGGAATTAAATGTTAATAGATCTTGACTCTAGATCTTGATCTGGTA
GATGGGGCTCTTAGTAGTTTGTTATTAGGTTGCTGCTTTGTAATTCTATC
AAGTTAAATCTTATCTTTTATATTTGAGGCAATATAGAAACTGTTTTCTT
CTGACAAAAACA
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