BQ623162

Overview
NameBQ623162
Unique NameBQ623162
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length627
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3813 contig Csv1_Contig3813:331..958. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623162 vs. ExPASy Swiss-Prot
Match: ASNS_MOUSE (Asparagine synthetase [glutamine-hydrolyzing] OS=Mus musculus GN=Asns PE=2 SV=3)

HSP 1 Score: 150.214 bits (378), Expect = 8.043e-36
Identity = 80/173 (46.24%), Postives = 113/173 (65.32%), Query Frame = 1
Query:   28 MVISGEGSDEIFGGYLYFHKAPNKEEFHRETCHKIKALHQYDCLRANKATSAWGVEARVPFLDKDFINVAMAIDPEWKMINPQEGRLEKWILRKAFDDEERPYLPKHVLYRQKEQFSDG---VGYSWIDGLKAHAEQHVTDKMMQNAQYIFPHNTPLTKEAYYYRMIFERFFP 537
            ++ SGEGSDE+  GY+YFHKAP+ E+   E+   +K L+ +D LRA++ T+A G+E RVPFLD  F +  +++ P+ ++  P+ G +EK +LR+ F+D     LPK +L+R KE FSDG   V  SW   L+ + E  V D+MM  A   FP NTP TKE Y+YR IFER +P
Sbjct:  360 VIFSGEGSDELTQGYIYFHKAPSPEKAEEESERLLKELYLFDVLRADRTTAAHGLELRVPFLDHRFSSYYLSLPPDMRI--PKNG-IEKHLLRETFEDCN--LLPKEILWRPKEAFSDGITSVKNSWFKILQDYVEHQVDDEMMSAASQKFPFNTPKTKEGYFYRQIFERHYP 527          
BLAST of BQ623162 vs. ExPASy Swiss-Prot
Match: ASNS_MESAU (Asparagine synthetase [glutamine-hydrolyzing] OS=Mesocricetus auratus GN=ASNS PE=1 SV=3)

HSP 1 Score: 150.214 bits (378), Expect = 8.043e-36
Identity = 80/173 (46.24%), Postives = 111/173 (64.16%), Query Frame = 1
Query:   28 MVISGEGSDEIFGGYLYFHKAPNKEEFHRETCHKIKALHQYDCLRANKATSAWGVEARVPFLDKDFINVAMAIDPEWKMINPQEGRLEKWILRKAFDDEERPYLPKHVLYRQKEQFSDG---VGYSWIDGLKAHAEQHVTDKMMQNAQYIFPHNTPLTKEAYYYRMIFERFFP 537
            ++ SGEGSDE+  GY+YFHKAP+ E+   E+   +K L+ +D LRA++ T+A G+E RVPFLD  F +  +++ PE ++  P+ G +EK +LR+ F+D     LPK +L+R KE FSDG   V  SW   L+ + E  V D MM  A   FP NTP TKE Y+YR IFE  +P
Sbjct:  360 VIFSGEGSDELTQGYIYFHKAPSPEKAEEESERLLKELYLFDVLRADRTTAAHGLELRVPFLDHRFSSYYLSLPPEMRV--PKNG-IEKHLLRETFEDSN--LLPKEILWRPKEAFSDGITSVKNSWFKILQDYVEHQVDDAMMATAAQKFPFNTPKTKEGYFYRQIFEHHYP 527          
BLAST of BQ623162 vs. ExPASy Swiss-Prot
Match: ASNS_CHICK (Asparagine synthetase [glutamine-hydrolyzing] OS=Gallus gallus GN=ASNS PE=2 SV=3)

HSP 1 Score: 149.443 bits (376), Expect = 1.372e-35
Identity = 77/177 (43.50%), Postives = 117/177 (66.10%), Query Frame = 1
Query:   28 MVISGEGSDEIFGGYLYFHKAPNKEEFHRETCHKIKALHQYDCLRANKATSAWGVEARVPFLDKDFINVAMAIDPEWKMINPQEGRLEKWILRKAFDDEERPYLPKHVLYRQKEQFSDGVG---YSWIDGLKAHAEQHVTDKMMQNAQYIFPHNTPLTKEAYYYRMIFERFFPQNSA 549
            ++ SGEGSDE+  GY+YFHKAP+ EE   E+   +K L+ +D LRA++ T+A G+E RVPFLD  F +  +++  E ++  P+ G +EK++LR++F+D     LPK +L+R KE FSDG+     SW   L+ + +Q V D +++ A   +P N P TKE+YYYR IFE+ +P  S+
Sbjct:  360 VIFSGEGSDELTQGYIYFHKAPSPEEAAEESERLLKELYLFDVLRADRTTAAHGLELRVPFLDHRFTSYYLSLPAELRI--PKNG-IEKYLLRQSFEDSN--LLPKEILWRPKEAFSDGIASVKKSWFSILQDYIDQQVDDLLLEKAAEKYPFNPPRTKESYYYRQIFEKHYPGRSS 531          
BLAST of BQ623162 vs. ExPASy Swiss-Prot
Match: ASNS_BOVIN (Asparagine synthetase [glutamine-hydrolyzing] OS=Bos taurus GN=ASNS PE=2 SV=3)

HSP 1 Score: 145.206 bits (365), Expect = 2.587e-34
Identity = 77/173 (44.51%), Postives = 111/173 (64.16%), Query Frame = 1
Query:   28 MVISGEGSDEIFGGYLYFHKAPNKEEFHRETCHKIKALHQYDCLRANKATSAWGVEARVPFLDKDFINVAMAIDPEWKMINPQEGRLEKWILRKAFDDEERPYLPKHVLYRQKEQFSDG---VGYSWIDGLKAHAEQHVTDKMMQNAQYIFPHNTPLTKEAYYYRMIFERFFP 537
            ++ SGEGSDE+  GY+YFHKAP+ E+   E+   ++ L+ +D LRA++ T+A G+E RVPFLD  F +  +++ P+ ++  P+ G +EK +LR+ F+D     +PK +L+R KE FSDG   V  SW   L+ + E  V D  M +A   FP NTP TKE YYYR IFE  +P
Sbjct:  360 VIFSGEGSDELTQGYIYFHKAPSPEKAEEESERLLRELYLFDVLRADRTTAAHGLELRVPFLDHRFSSYYLSLPPDMRV--PKNG-IEKHLLRETFEDSN--LIPKEILWRPKEAFSDGITSVKNSWFRILQDYIEHQVDDAAMASAAQKFPINTPKTKEGYYYRQIFENHYP 527          
BLAST of BQ623162 vs. ExPASy Swiss-Prot
Match: ASNS_MIMIV (Probable asparagine synthetase [glutamine-hydrolyzing] OS=Acanthamoeba polyphaga mimivirus GN=MIMI_R475 PE=3 SV=3)

HSP 1 Score: 130.183 bits (326), Expect = 8.613e-30
Identity = 71/174 (40.80%), Postives = 105/174 (60.34%), Query Frame = 1
Query:   22 VKMVISGEGSDEIFGGYLYFHKAPNKEEFHRETCHKIKALHQYDCLRANKATSAWGVEARVPFLDKDFINVAMAIDPEWKMINPQEGRLEKWILRKAFDDEERPYLPKHVLYRQKEQFSDGVG---YSWIDGLKAHAEQHVTDKMMQNAQYIFPHNTPLTKEAYYYRMIFERFF 534
            +++++SGEGSDEI G Y Y   APN +EFH+ET   ++ L+ +D  R ++  +  G+E RVPFLD ++++  M IDP   M   +   +EK I+R AF    + YLP+++LYR KE FSD V     +W   ++   E+  TD+ +QN+ Y F  N P  KEA YYR IF   +
Sbjct:  355 IRVLLSGEGSDEIHGSYKYMRSAPNSQEFHKETIRLLEELYLFDNKRTDRTMAGNGLEVRVPFLDFNYVDFIMNIDPNLLMY--KSDYIEKKIIRDAF----KGYLPENILYRPKEAFSDAVSSKEINWYRSIQKITEEIYTDEKLQNSNYKF--NKPEIKEALYYRDIFNSHY 520          
The following BLAST results are available for this feature:
BLAST of BQ623162 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 25
Match NameE-valueIdentityDescription
ASNS_MOUSE8.043e-3646.24Asparagine synthetase [glutamine-hydrolyzing] OS=M... [more]
ASNS_MESAU8.043e-3646.24Asparagine synthetase [glutamine-hydrolyzing] OS=M... [more]
ASNS_CHICK1.372e-3543.50Asparagine synthetase [glutamine-hydrolyzing] OS=G... [more]
ASNS_BOVIN2.587e-3444.51Asparagine synthetase [glutamine-hydrolyzing] OS=B... [more]
ASNS_MIMIV8.613e-3040.80Probable asparagine synthetase [glutamine-hydrolyz... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00253 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00253 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623162 ID=BQ623162; Name=BQ623162; organism=Citrus sinensis; type=EST; length=627bp
CGGAAGATTAAATCTCTAGGAGTGAAGATGGTGATATCTGGTGAGGGATC
TGATGAGATTTTTGGTGGCTATTTGTACTTCCACAAGGCACCCAATAAGG
AAGAATTCCACCGCGAAACATGTCACAAGATAAAGGCTCTCCACCAGTAT
GATTGCTTGAGAGCTAACAAAGCAACATCTGCTTGGGGTGTAGAAGCTCG
AGTCCCCTTCCTTGACAAAGATTTTATTAATGTAGCAATGGCCATAGATC
CTGAGTGGAAGATGATTAATCCTCAAGAAGGACGTCTCGAGAAGTGGATC
CTGAGGAAGGCCTTCGATGATGAGGAGCGTCCCTATCTGCCAAAGCATGT
TCTGTACAGACAGAAGGAACAATTCAGTGATGGTGTTGGCTATAGTTGGA
TTGATGGCCTCAAAGCACATGCTGAACAACATGTGACTGATAAGATGATG
CAAAATGCTCAATACATCTTCCCACACAACACACCTTTGACTAAAGAAGC
CTACTACTACAGAATGATTTTCGAGAGGTTCTTTCCACAGAATTCAGCCA
GCTAACTGTCCCAGGAGGTGCGAGTGTACCATGCAGCACGGGTAAAGCTG
TCGAATGGGATGCTGAGTGGGCAAATC
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